Factsheet for Bra016809.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21016	Canola	mitochondrion, plastid	99.16	98.95
CDY31217	Canola	mitochondrion, plastid	95.79	94.59
Solyc12g005080.1.1	Tomato	nucleus	61.68	79.19
VIT_19s0090g00750.t01	Wine grape	cytosol	58.32	70.66
Bra035551.1-P	Field mustard	mitochondrion	64.42	70.34
PGSC0003DMT400071652	Potato	mitochondrion	68.42	69.0
VIT_10s0116g01480.t01	Wine grape	mitochondrion	68.63	68.92
Bra002934.1-P	Field mustard	mitochondrion	67.37	68.67
PGSC0003DMT400057449	Potato	mitochondrion	66.95	67.95
Solyc07g064800.2.1	Tomato	extracellular, nucleus	66.74	67.73
Os02t0514700-00	Rice	mitochondrion	56.21	67.09
GSMUA_AchrUn_...	Banana	mitochondrion	63.58	66.81
GSMUA_Achr3P18670_001	Banana	mitochondrion	63.16	66.37
KRH14369	Soybean	nucleus	64.63	66.16
KRH73773	Soybean	mitochondrion	64.63	66.16
TraesCS4A01G243500.1	Wheat	golgi, mitochondrion, unclear	60.0	65.07
TraesCS4D01G070200.1	Wheat	mitochondrion	60.0	65.07
TraesCS4B01G071300.1	Wheat	mitochondrion	59.79	64.84
Os04t0394200-01	Rice	mitochondrion	60.0	64.77
Bra028992.1-P	Field mustard	mitochondrion	66.53	63.97
Zm00001d025258_P009	Maize	mitochondrion	60.0	63.9
TraesCS2D01G039500.2	Wheat	mitochondrion	59.16	63.15
TraesCS2A01G041100.1	Wheat	golgi, nucleus, unclear	58.95	62.92
TraesCS2B01G053600.1	Wheat	mitochondrion	56.0	62.3
GSMUA_Achr9P01190_001	Banana	cytosol	64.21	61.37
OQU93042	Sorghum	mitochondrion	59.79	60.81
HORVU4Hr1G011850.1	Barley	mitochondrion, plastid	60.0	59.87
Zm00001d003923_P002	Maize	mitochondrion	59.16	59.41
Bra027386.1-P	Field mustard	mitochondrion	24.21	23.0
Bra001531.1-P	Field mustard	mitochondrion, plastid	21.89	22.32
Bra037976.1-P	Field mustard	mitochondrion	24.84	21.81
Bra033446.1-P	Field mustard	mitochondrion	26.95	19.97
Bra001220.1-P	Field mustard	mitochondrion	20.42	19.64
Bra017345.1-P	Field mustard	plastid	19.16	19.0
Bra025167.1-P	Field mustard	plastid	18.95	18.87
Bra028057.1-P	Field mustard	plastid	17.89	18.68
Os01t0314100-01	Rice	mitochondrion	19.79	17.97
Bra006910.1-P	Field mustard	mitochondrion	22.95	14.93
Bra040295.1-P	Field mustard	mitochondrion	6.11	11.28
Os01t0314000-01	Rice	cytosol	0.84	0.75

Protein Annotations

KEGG:00020+2.3.1.61	KEGG:00310+2.3.1.61	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.3.4.2	Gene3D:2.40.50.100
Gene3D:3.30.559.10	InterPro:Biotin_lipoyl	EnsemblPlantsGene:Bra016809	EnsemblPlants:Bra016809.1	EnsemblPlants:Bra016809.1-P	InterPro:CAT-like_dom_sf
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004149	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016740	GO:GO:0016746	GO:GO:0045252	InterPro:IPR000089	InterPro:IPR023213
UniProt:M4DJY1	PFAM:PF00198	PFAM:PF00364	ScanProsite:PS00189	PFscan:PS50968	PANTHER:PTHR43416
PANTHER:PTHR43416:SF5	SUPFAM:SSF51230	SUPFAM:SSF52777	InterPro:Single_hybrid_motif	InterPro:SucB	TIGRFAMs:TIGR01347
UniParc:UPI00025463EF	SEG:seg	:	:	:	:

Description

AT4G26910 (E=1e-148) | 2-oxoacid dehydrogenase family protein

Coordinates

chrA08:+:20076763..20079423

Molecular Weight (calculated)

51810.4 Da

IEP (calculated)

9.415

GRAVY (calculated)

-0.290

Length

475 amino acids

Sequence
(BLAST)

001: MAIWSVVRRK VFNGCNSSYS SSIIGKSWKC KSSTASHTRY YGALSKETSV FVRGSPVSLP CYLGSSLSSN AIMRVTVSYN HTFNTSIRLF SSDEGGSVDA
101: VVPYMGESIS DGTLATILKK PGDRVEADEP IAQIETDKVT IDISSPTAGT IEKIVAKEGD TVEPGFKIAV ISKSSGAATQ VEDSEKKPEE TKPEKKEEKP
201: KPVAESPPSP KVETSPPKEK SRAPPPPPPA SGASPREPQL PPKDRERRVP MTRLRKRVAT RLKDSQNTFA LLTTFNEVDM TNLMKLRSEY KDAFLEKHGV
301: KLGLMSGFIK GAISALQNQP VVNAVIDGED IIYRDYVDIS IAVGTPKGLV VPVLRNVEQM NFAEIEKEIN RLAKKATAGT ISIDEMAGGT FTISNGGVYG
401: SLLSTPIINP PQSAILGMHS ILNRPMVVGG EVMSRPMMYI ALTYDHRLID GREAVLFLRR IKDVVEDPRR LLLDI

Best Arabidopsis Sequence Match ( AT4G26910.1 )
(BLAST)

001: MMMRAVIRRA ASNGSSPSLF AKSLQSSRVA ASSPSLLSGS ETGAYLHRGN HAHSFHNLAL PAGNSGISRS ASLVSSTLQR WVRPFSAETG DTVEAVVPHM
101: GESITDGTLA TFLKKPGERV QADEAIAQIE TDKVTIDIAS PASGVIQEFL VNEGDTVEPG TKVAIISKSE DTASQVTPSQ KIPETTDTKP SPPAEDKQKP
201: RVESAPVAEK PKAPSSPPPP KQSAKEPQLP PKERERRVPM TRLRKRVATR LKDSQNTFAL LTTFNEVDMT NLMKLRSQYK DAFYEKHGVK LGLMSGFIKA
301: AVSALQHQPV VNAVIDGDDI IYRDYVDISI AVGTSKGLVV PVIRGADKMN FAEIEKTINS LAKKANEGTI SIDEMAGGSF TVSNGGVYGS LISTPIINPP
401: QSAILGMHSI VSRPMVVGGS VVPRPMMYVA LTYDHRLIDG REAVYFLRRV KDVVEDPQRL LLDI

Arabidopsis Description

Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8H107]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.