Factsheet for Bra001531.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001531.1-P	mitochondrion
Bra027386.1-P	mitochondrion

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13930.1	Bra001531.1-P	AT3G13930.1	24846799
AT3G13930.1	Bra027386.1-P	AT3G13930.1	24846799

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82504	Canola	plastid	95.06	82.34
Bra027386.1-P	Field mustard	mitochondrion	84.12	78.4
CDX75740	Canola	mitochondrion, plastid	93.35	77.54
AT3G13930.1	Thale cress	mitochondrion	85.19	73.65
Bra037976.1-P	Field mustard	mitochondrion	77.25	66.54
VIT_11s0016g01870.t01	Wine grape	mitochondrion	67.6	57.59
VIT_09s0002g01800.t01	Wine grape	mitochondrion	68.45	57.48
KRH06095	Soybean	mitochondrion	66.52	56.67
PGSC0003DMT400048225	Potato	mitochondrion	66.74	56.34
Solyc07g006790.2.1	Tomato	plastid	66.74	56.24
KRH47526	Soybean	mitochondrion	65.88	56.12
EES04754	Sorghum	mitochondrion	63.09	54.55
HORVU6Hr1G003770.1	Barley	cytosol, mitochondrion	62.23	54.31
TraesCS6D01G024400.1	Wheat	golgi, mitochondrion	63.09	54.24
TraesCS6B01G028600.1	Wheat	mitochondrion	61.8	54.14
TraesCS6A01G022600.2	Wheat	golgi	62.02	53.72
Zm00001d053580_P002	Maize	mitochondrion	62.23	52.63
Os06t0105400-02	Rice	mitochondrion	62.02	52.55
TraesCS4A01G481800.3	Wheat	mitochondrion, unclear	60.52	52.32
TraesCS7D01G011600.1	Wheat	golgi, mitochondrion	60.52	52.13
Os07t0410100-01	Rice	mitochondrion	60.3	51.94
TraesCS7A01G014600.4	Wheat	golgi, mitochondrion	60.09	51.76
Os02t0105200-01	Rice	mitochondrion	60.52	51.46
HORVU7Hr1G001330.9	Barley	plastid	60.94	49.22
Zm00001d016365_P002	Maize	mitochondrion	63.73	48.14
GSMUA_Achr10P...	Banana	mitochondrion, vacuole	63.3	46.46
Bra028057.1-P	Field mustard	plastid	29.18	29.89
Bra025167.1-P	Field mustard	plastid	29.18	28.51
Bra017345.1-P	Field mustard	plastid	29.18	28.39
Bra033446.1-P	Field mustard	mitochondrion	38.2	27.77
Bra035551.1-P	Field mustard	mitochondrion	23.82	25.52
Bra002934.1-P	Field mustard	mitochondrion	23.61	23.61
Bra006910.1-P	Field mustard	mitochondrion	36.7	23.42
Bra028992.1-P	Field mustard	mitochondrion	23.61	22.27
Bra001220.1-P	Field mustard	mitochondrion	23.39	22.06
Bra016809.1-P	Field mustard	mitochondrion, plastid	22.32	21.89
Bra040295.1-P	Field mustard	mitochondrion	7.08	12.84

Protein Annotations

InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.2.1.2	Gene3D:2.40.50.100	Gene3D:3.30.559.10	Gene3D:4.10.320.10	EnsemblPlantsGene:Bra001531
EnsemblPlants:Bra001531.1	EnsemblPlants:Bra001531.1-P	InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	InterPro:IPR004167	InterPro:IPR023213
InterPro:IPR036625	UniProt:M4CBF1	PFAM:PF00198	PFAM:PF02817	PFscan:PS51826	InterPro:PSBD
PANTHER:PTHR43178	PANTHER:PTHR43178:SF1	SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777	InterPro:Single_hybrid_motif
UniParc:UPI0002540903	:	:	:	:	:

Description

AT3G13930 (E=6e-122) | dihydrolipoamide S-acetyltransferase, putative

Coordinates

chrA03:+:16881393..16884923

Molecular Weight (calculated)

50626.3 Da

IEP (calculated)

6.936

GRAVY (calculated)

-0.322

Length

466 amino acids

Sequence
(BLAST)

001: MAYASRIIIH SNKLKHVSTL LRREHSVAAR GFSNSSTHSS LTAREDLPPH QEIGMPSLSP TMTEACTSLN FLTTIHVVDY FYLYTKAICP NFRDKATVEM
101: ECMEEGYLAK ILKEEGTKAI QVGEVIAITV EEEEDIQKFK DYTPSSGGSP AAPEAKPATS PPKEEKVEKP ASAPEAETSK PSPAPSEDRI FASPLAKKLA
201: EDNNVPLSSI KATGPEGRIV KADVEEFLAS RGKETTAKPS KPTDSKVTAS RLAFSKRTIP HYYLTVDTCV DKMMGLRSQL NSFQEANGGK RISVNDLVIK
301: AAALALRKVP QCNSSWTDEY IRQFSNVNIN VAVQTENGLY VPVVKNADKK GLSTIGEEVR FLAQKAKENS LKPEDYEGGT FTVSNLGGPF GIKQFCAVIN
401: PPQAAILAIG SAEKRVVAGG GPDQFNVASY MSVTLSCDHR VIDGAIGAEW LKAFKGYIET PESMLL

Best Arabidopsis Sequence Match ( AT3G13930.1 )
(BLAST)

001: MASRIINHSK KLKHVSALLR RDHAVAVRCF SNSTHPSLVG REDIFKARLN YSSVERISKC GTGNVTMLSG ISTTSTKLSS PMAGPKLFKE FISSQMRSVR
101: GFSSSSDLPP HQEIGMPSLS PTMTEGNIAR WLKKEGDKVA PGEVLCEVET DKATVEMECM EEGFLAKIVK EEGAKEIQVG EVIAITVEDE DDIQKFKDYT
201: PSSDTGPAAP EAKPAPSLPK EEKVEKPASA PEAKISKPSS APSEDRIFAS PLARKLAEDN NVPLSSIKGT GPEGRIVKAD VEDFLASGSK ETTAKPSKQV
301: DSKVPALDYV DIPHTQIRKV TASRLAFSKQ TIPHYYLTVD TCVDKMMGLR SQLNSFQEAS GGKRISVNDL VIKAAALALR KVPQCNSSWT DEYIRQFKNV
401: NINVAVQTEN GLYVPVVKDA DKKGLSTIGE EVRFLAQKAK ENSLKPEDYE GGTFTVSNLG GPFGIKQFCA VINPPQAAIL AIGSAEKRVV PGTGPDQYNV
501: ASYMSVTLSC DHRVIDGAIG AEWLKAFKGY IETPESMLL

Arabidopsis Description

Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8RWN9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.