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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 4
  • cytosol 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G481800.3 mitochondrion, mitochondrion, mitochondrion
TraesCS6A01G022600.2 mitochondrion, mitochondrion, mitochondrion
TraesCS6B01G028600.1 mitochondrion, mitochondrion, mitochondrion
TraesCS6D01G024400.1 mitochondrion, mitochondrion, mitochondrion
TraesCS7A01G014600.4 mitochondrion, mitochondrion, mitochondrion
TraesCS7D01G011600.1 mitochondrion, mitochondrion, mitochondrion

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54220.1 TraesCS4A01G481800.3 AT1G54220.1 24846799
AT1G54220.1 TraesCS6A01G022600.2 AT1G54220.1 24846799
AT1G54220.1 TraesCS6B01G028600.1 AT1G54220.1 24846799
AT1G54220.1 TraesCS6D01G024400.1 AT1G54220.1 24846799
AT1G54220.1 TraesCS7A01G014600.4 AT1G54220.1 24846799
AT1G54220.1 TraesCS7D01G011600.1 AT1G54220.1 24846799
AT1G54220.1 TraesCS4A01G481800.3 AT3G13930.1 24846799
AT1G54220.1 TraesCS6A01G022600.2 AT3G13930.1 24846799
AT1G54220.1 TraesCS6B01G028600.1 AT3G13930.1 24846799
AT1G54220.1 TraesCS6D01G024400.1 AT3G13930.1 24846799
AT1G54220.1 TraesCS7A01G014600.4 AT3G13930.1 24846799
AT1G54220.1 TraesCS7D01G011600.1 AT3G13930.1 24846799
AT3G13930.1 TraesCS4A01G481800.3 AT3G13930.1 24846799
AT3G13930.1 TraesCS6A01G022600.2 AT3G13930.1 24846799
AT3G13930.1 TraesCS6B01G028600.1 AT3G13930.1 24846799
AT3G13930.1 TraesCS6D01G024400.1 AT3G13930.1 24846799
AT3G13930.1 TraesCS7A01G014600.4 AT3G13930.1 24846799
AT3G13930.1 TraesCS7D01G011600.1 AT3G13930.1 24846799
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G022600.2 Wheat golgi 98.68 97.58
TraesCS6D01G024400.1 Wheat golgi, mitochondrion 98.12 96.31
HORVU6Hr1G003770.1 Barley cytosol, mitochondrion 95.68 95.32
EES04754 Sorghum mitochondrion 84.4 83.3
Os07t0410100-01 Rice mitochondrion 84.59 83.18
Os02t0105200-01 Rice mitochondrion 84.21 81.75
Zm00001d053580_P002 Maize mitochondrion 82.89 80.04
Zm00001d016365_P002 Maize mitochondrion 81.95 70.66
AT3G13930.1 Thale cress mitochondrion 63.91 63.08
KRH47526 Soybean mitochondrion 64.66 62.89
KRH06095 Soybean mitochondrion 64.47 62.71
Solyc07g006790.2.1 Tomato plastid 64.85 62.39
VIT_11s0016g01870.t01 Wine grape mitochondrion 63.72 61.97
PGSC0003DMT400048225 Potato mitochondrion 64.29 61.96
Bra001531.1-P Field mustard mitochondrion, plastid 54.14 61.8
VIT_09s0002g01800.t01 Wine grape mitochondrion 64.1 61.44
AT1G54220.1 Thale cress mitochondrion 62.03 61.22
Bra037976.1-P Field mustard mitochondrion 62.22 61.18
Bra027386.1-P Field mustard mitochondrion 57.14 60.8
CDX82504 Canola plastid 61.28 60.59
CDY55206 Canola mitochondrion 57.89 60.16
CDY24058 Canola mitochondrion 62.03 59.46
CDY33075 Canola mitochondrion, plastid 61.84 59.28
CDX97529 Canola mitochondrion 62.59 59.25
CDX75740 Canola mitochondrion, plastid 62.03 58.82
GSMUA_Achr10P... Banana mitochondrion, vacuole 65.41 54.8
TraesCS7B01G205500.1 Wheat mitochondrion 35.71 42.99
TraesCS5B01G116300.1 Wheat golgi, unclear 25.0 28.98
TraesCS3B01G372900.1 Wheat plastid 24.44 28.63
TraesCS5B01G489600.1 Wheat golgi 25.38 28.42
TraesCS5B01G204800.1 Wheat plastid 24.44 28.08
TraesCS4B01G071300.1 Wheat mitochondrion 21.99 26.71
TraesCS2B01G053600.1 Wheat mitochondrion 19.92 24.82
Protein Annotations
KEGG:00010+2.3.1.12KEGG:00020+2.3.1.12KEGG:00620+2.3.1.12InterPro:2-oxoA_DH_lipoyl-BSInterPro:2-oxoacid_DH_actylTfraseMapMan:2.2.1.2
Gene3D:2.40.50.100Gene3D:3.30.559.10Gene3D:4.10.320.10InterPro:Biotin_lipoylInterPro:CAT-like_dom_sfInterPro:E3-bd_dom_sf
GO:GO:0003674GO:GO:0003824GO:GO:0004742GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0006090GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016740
GO:GO:0016746GO:GO:0045254InterPro:IPR000089InterPro:IPR004167InterPro:IPR023213InterPro:IPR036625
InterPro:LAT1PFAM:PF00198PFAM:PF00364PFAM:PF02817ScanProsite:PS00189PFscan:PS50968
PFscan:PS51826InterPro:PSBDPANTHER:PTHR43178PANTHER:PTHR43178:SF4SUPFAM:SSF47005SUPFAM:SSF51230
SUPFAM:SSF52777InterPro:Single_hybrid_motifTIGRFAMs:TIGR01349EnsemblPlantsGene:TraesCS6B01G028600EnsemblPlants:TraesCS6B01G028600.1TIGR:cd06849
SEG:seg:::::
Description
No Description!
Coordinates
chr6B:-:17226532..17232198
Molecular Weight (calculated)
57250.3 Da
IEP (calculated)
8.120
GRAVY (calculated)
-0.359
Length
532 amino acids
Sequence
(BLAST)
001: MQLRSLRNAV DCERASLARY FSTGSVSSAV KENGVDKRIG GARFSQYKQP GKELETFKVS LGGVNGSSTC RRMLINRVPS AVTGLNGSLS CGRVASARSF
101: SSSADLPPHQ EIGMPSLSPT MTEGNIAKWI KKEGDKVSPG EVLCEVETDK ATVEMECMEE GYLAKIVQGD GAKEIKVGEV ICVTVEEEGD IEKFKDYKPS
201: AADAPAAPSE SKATPEPAAP KVEEKVPAKA PEPKAPKAEK ASRSGDRIFS SPLARKLAED NNVQLSSVKG TGPDGRILKA DIEDYLAKGG KSESFAASGL
301: DYTDIPNAQI RKVTANRLLA SKQTIPHYYL TVDTRVDKLI KLRGELNPLQ EASGGKKISI NDLVIKAAAL ALRKVPECNS SWMNDFIRQY HNVNINVAVQ
401: TEHGLFVPVV RDADKKGLGT IGEEVKQLAQ RARDNSLKPQ DYEGGTFTVS NLGGPFGIKQ FCAIINPPQS AILAIGSAEK RVIPGSVDGQ YEFGSYMSVT
501: MSCDHRVIDG AIGAEFLKAF KGYIENPTTM LL
Best Arabidopsis Sequence Match ( AT1G54220.1 )
(BLAST)
001: MAYASRIINH SKKLKDVSTL LRRENAATIR YYSNTNRAPL NREDTFNSRL GYPPLERISI CSTSTLPVSI IFSTTRSNLS SAMGRPIFGK EFSCLMQSAR
101: GFSSGSDLPP HQEIGMPSLS PTMTEGNIAR WLKKEGDKVA PGEVLCEVET DKATVEMECM EEGYLAKIVK AEGSKEIQVG EVIAITVEDE EDIGKFKDYT
201: PSSTADAAPT KAEPTPAPPK EEKVKQPSSP PEPKASKPST PPTGDRVFAS PLARKLAEDN NVPLSDIEGT GPEGRIVKAD IDEYLASSGK GATAKPSKST
301: DSKAPALDYV DIPHSQIRKV TASRLAFSKQ TIPHYYLTVD TCVDKLMALR SQLNSFKEAS GGKRISVNDL VVKAAALALR KVPQCNSSWT DDYIRQFKNV
401: NINVAVQTEN GLYVPVVKDA DRKGLSTIGE EVRLLAQKAK ENSLKPEDYE GGTFTVSNLG GPFGIKQFCA VVNPPQAAIL AVGSAEKRVV PGNGPDQFNF
501: ASYMPVTLSC DHRVVDGAIG AEWLKAFKGY IENPKSMLL
Arabidopsis Description
Acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:A0A178W5Y1]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.