Factsheet for GSMUA_Achr10P08050_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, vacuole

Predictor Summary:

plastid 2
mitochondrion 5
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...	mitochondrion, mitochondrion, mitochondrion

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54220.1	GSMUA_Achr10P...	AT1G54220.1	24846799
AT1G54220.1	GSMUA_Achr10P...	AT3G13930.1	24846799
AT3G13930.1	GSMUA_Achr10P...	AT3G13930.1	24846799

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0410100-01	Rice	mitochondrion	57.32	67.28
HORVU6Hr1G003770.1	Barley	cytosol, mitochondrion	56.06	66.67
EES04754	Sorghum	mitochondrion	55.91	65.86
TraesCS7D01G011600.1	Wheat	golgi, mitochondrion	56.06	65.8
TraesCS6D01G024400.1	Wheat	golgi, mitochondrion	56.06	65.68
TraesCS4A01G481800.3	Wheat	mitochondrion, unclear	55.59	65.49
TraesCS7A01G014600.4	Wheat	golgi, mitochondrion	55.75	65.43
TraesCS6B01G028600.1	Wheat	mitochondrion	54.8	65.41
Os02t0105200-01	Rice	mitochondrion	56.22	65.15
Os06t0105400-02	Rice	mitochondrion	56.22	64.91
TraesCS6A01G022600.2	Wheat	golgi	54.8	64.68
Zm00001d053580_P002	Maize	mitochondrion	55.59	64.07
VIT_11s0016g01870.t01	Wine grape	mitochondrion	54.8	63.62
KRH06095	Soybean	mitochondrion	54.8	63.62
KRH47526	Soybean	mitochondrion	54.65	63.44
Bra001531.1-P	Field mustard	mitochondrion, plastid	46.46	63.3
Solyc07g006790.2.1	Tomato	plastid	55.12	63.29
AT3G13930.1	Thale cress	mitochondrion	53.7	63.27
VIT_09s0002g01800.t01	Wine grape	mitochondrion	55.28	63.24
PGSC0003DMT400048225	Potato	mitochondrion	54.8	63.04
Bra027386.1-P	Field mustard	mitochondrion	49.29	62.6
AT1G54220.1	Thale cress	mitochondrion	52.91	62.34
CDX82504	Canola	plastid	52.44	61.9
Bra037976.1-P	Field mustard	mitochondrion	52.6	61.74
CDX75740	Canola	mitochondrion, plastid	54.02	61.14
CDY55206	Canola	mitochondrion	49.13	60.94
HORVU7Hr1G001330.9	Barley	plastid	54.96	60.49
CDY33075	Canola	mitochondrion, plastid	52.76	60.36
CDX97529	Canola	mitochondrion	53.23	60.14
CDY24058	Canola	mitochondrion	52.44	60.0
Zm00001d016365_P002	Maize	mitochondrion	57.01	58.67
GSMUA_AchrUn_...	Banana	mitochondrion	30.24	38.79
GSMUA_Achr9P08540_001	Banana	cytosol	12.6	33.47
GSMUA_Achr3P07350_001	Banana	cytosol	20.79	32.43
GSMUA_Achr9P08550_001	Banana	plastid	7.09	32.14
GSMUA_Achr3P17420_001	Banana	cytosol	10.55	26.91
GSMUA_AchrUn_...	Banana	mitochondrion	18.74	26.33
GSMUA_Achr3P18670_001	Banana	mitochondrion	18.43	25.89
GSMUA_Achr9P01190_001	Banana	cytosol	19.53	24.95
GSMUA_Achr10P...	Banana	mitochondrion	18.58	22.22
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	3.15	19.8

Protein Annotations

KEGG:00010+2.3.1.12	KEGG:00020+2.3.1.12	KEGG:00620+2.3.1.12	Gene3D:1.10.560.10	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase
MapMan:2.2.1.2	Gene3D:2.40.50.100	Gene3D:3.30.559.10	Gene3D:4.10.320.10	InterPro:Biotin_lipoyl	InterPro:CAT-like_dom_sf
InterPro:E3-bd_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004742	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006090	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0016746	GO:GO:0045254	InterPro:GROEL-like_equatorial_sf
EnsemblPlantsGene:GSMUA_Achr10G08050_001	EnsemblPlants:GSMUA_Achr10P08050_001	EnsemblPlants:GSMUA_Achr10T08050_001	InterPro:IPR000089	InterPro:IPR004167	InterPro:IPR023213
InterPro:IPR027413	InterPro:IPR036625	InterPro:LAT1	UniProt:M0RGD1	PFAM:PF00198	PFAM:PF00364
PFAM:PF02817	PFAM:PF15054	ScanProsite:PS00189	PFscan:PS50968	PFscan:PS51826	InterPro:PSBD
PANTHER:PTHR43178	PANTHER:PTHR43178:SF4	SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777	InterPro:STMP1
InterPro:Single_hybrid_motif	TIGRFAMs:TIGR01349	UniParc:UPI000295B972	SEG:seg	:	:

Description

Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr10G08050_001]

Coordinates

chr10:+:18068338..18086604

Molecular Weight (calculated)

68938.6 Da

IEP (calculated)

8.681

GRAVY (calculated)

-0.235

Length

635 amino acids

Sequence
(BLAST)

001: MAIIRRSLSF LLGAACGVYV AQNYSVPNLR KLAGTAMSHF ATKPLLFLFL SVAGPFFPPS YKPSSSPLPS SRLPGAVRDF IPDILTASSC GGGGDQIRSV
101: MTLAFQIIRH SRKIGSRLGR CRNYAAKDIR FGVEARASML QGVENLDDAV KVTIGPKAFC SESVRTNCYQ KATTRTTLAG MNFYHALSCV PVATRRHFST
201: NSELPPHETI GMPSLSPTMT EGNIARWLKK EGDKVLPGEV LCEVETDKAT VEMECMEEGY IAKIIHGDGS KDLKVGEAIA IIVEEEGDIE KFKDYSVSKS
301: SAPTEVKTPS EPSQSKKEEE TPAKAAEPNA SKTEEVSHSE DRIFSSPLAR KLAEDNNVSL SSLKGTGPDG RIVKADVVDY LASREKDVSA QSKAKGPAAV
401: QGLDYVDLPN SQIRKVTASR LLLSKQTIPH YYLTVDTRVD KLMELRSKLN AIQETSGGKR ISINDLVIKA AALALRKVPQ CNSSWTNDFI RQYNNVNINV
501: AVQTDNGLFV PVIRDADKKG LSIIAEEVKN LAQKAKENSL KPENYEGGTF TVSNLGGPFG VKQFCAIINP PQSAILAVGS AERRVLPGGA PDQFEFGSFM
601: SVTLSCDHRV IDGAIGAQWL KAFKGYIENP HSMLL

Best Arabidopsis Sequence Match ( AT1G54220.2 )
(BLAST)

001: MAYASRIINH SKKLKDVSTL LRRENAATIR YYSNTNRAPL NREDTFNSRL GYPPLERISI CSTSTLPVSI IFSTTRSNLS SAMGRPIFGK EFSCLMQSAR
101: GFSSGSDLPP HQEIGMPSLS PTMTEGNIAR WLKKEGDKVA PGEVLCEVET DKATVEMECM EEGYLAKIVK AEGSKEIQVG EVIAITVEDE EDIGKFKDYT
201: PSSTADAAPT KAEPTPAPPK EEKVKQPSSP PEPKASKPST PPTGDRVFAS PLARKLAEDN NVPLSDIEGT GPEGRIVKAD IDEYLASSGK GATAKPSKST
301: DSKAPALDYV DIPHSQIRKV TASRLAFSKQ TIPHYYLTVD TCVDKLMALR SQLNSFKEAS GGKRISVNDL VVKAAALALR KVPQCNSSWT DDYIRQFKNV
401: NINVAVQTEN GLYVPVVKDA DRKGLSTIGE EVRLLAQKAK ENSLKPEDYE GGTFTVSNLG GPFGIKQFCA VVNPPQAAIL AVGSAEKRVV PGNGPDQFNF
501: ASYMPVTLSC DHRVVDGAIG AEWLKAFKGY IENPKSMLL

Arabidopsis Description

Acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:A0A178W5Y1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.