Factsheet for Zm00001d053580_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d016365_P002	mitochondrion, mitochondrion, mitochondrion
Zm00001d053580_P002	mitochondrion, mitochondrion, mitochondrion

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54220.1	Zm00001d016365_P002	AT1G54220.1	24846799
AT1G54220.1	Zm00001d053580_P002	AT1G54220.1	24846799
AT1G54220.1	Zm00001d016365_P002	AT3G13930.1	24846799
AT1G54220.1	Zm00001d053580_P002	AT3G13930.1	24846799
AT3G13930.1	Zm00001d016365_P002	AT3G13930.1	24846799
AT3G13930.1	Zm00001d053580_P002	AT3G13930.1	24846799

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04754	Sorghum	mitochondrion	92.92	94.99
TraesCS6D01G024400.1	Wheat	golgi, mitochondrion	82.21	83.58
TraesCS6B01G028600.1	Wheat	mitochondrion	80.04	82.89
HORVU6Hr1G003770.1	Barley	cytosol, mitochondrion	80.04	82.58
Os07t0410100-01	Rice	mitochondrion	80.94	82.44
TraesCS6A01G022600.2	Wheat	golgi	80.4	82.34
Zm00001d016365_P002	Maize	mitochondrion	91.29	81.52
Os02t0105200-01	Rice	mitochondrion	80.4	80.84
Solyc07g006790.2.1	Tomato	plastid	63.52	63.29
AT3G13930.1	Thale cress	mitochondrion	61.71	63.08
VIT_11s0016g01870.t01	Wine grape	mitochondrion	62.07	62.52
PGSC0003DMT400048225	Potato	mitochondrion	62.61	62.5
Bra001531.1-P	Field mustard	mitochondrion, plastid	52.63	62.23
KRH47526	Soybean	mitochondrion	61.52	61.97
Bra037976.1-P	Field mustard	mitochondrion	60.8	61.92
KRH06095	Soybean	mitochondrion	61.34	61.79
VIT_09s0002g01800.t01	Wine grape	mitochondrion	62.07	61.62
Bra027386.1-P	Field mustard	mitochondrion	55.54	61.2
AT1G54220.1	Thale cress	mitochondrion	59.71	61.04
CDX82504	Canola	plastid	59.17	60.59
CDY33075	Canola	mitochondrion, plastid	60.98	60.54
CDY24058	Canola	mitochondrion	60.8	60.36
CDY55206	Canola	mitochondrion	55.72	59.96
CDX97529	Canola	mitochondrion	60.62	59.43
CDX75740	Canola	mitochondrion, plastid	60.25	59.18
GSMUA_Achr10P...	Banana	mitochondrion, vacuole	64.07	55.59
Zm00001d034531_P001	Maize	mitochondrion	34.66	38.74
Zm00001d023606_P005	Maize	plastid	26.5	31.95
Zm00001d032224_P001	Maize	plastid	25.95	30.36
Zm00001d020426_P001	Maize	plastid	24.32	29.52
Zm00001d025258_P009	Maize	mitochondrion	23.23	28.7
Zm00001d050383_P001	Maize	plastid	25.95	27.39
Zm00001d003923_P002	Maize	mitochondrion	22.87	26.64
Zm00001d041839_P001	Maize	plastid	26.68	24.79
Zm00001d040670_P004	Maize	mitochondrion	21.78	22.94

Protein Annotations

KEGG:00010+2.3.1.12	KEGG:00020+2.3.1.12	KEGG:00620+2.3.1.12	InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.2.1.2	Gene3D:2.40.50.100
Gene3D:3.30.559.10	Gene3D:4.10.320.10	UniProt:A0A1D6QQD9	ProteinID:AQK59746.1	InterPro:Biotin_lipoyl	InterPro:CAT-like_dom_sf
InterPro:E3-bd_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004742	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006090	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0016746	GO:GO:0045254	InterPro:IPR000089
InterPro:IPR004167	InterPro:IPR023213	InterPro:IPR036625	InterPro:LAT1	PFAM:PF00198	PFAM:PF00364
PFAM:PF02817	PFscan:PS50968	PFscan:PS51826	InterPro:PSBD	PANTHER:PTHR43178	PANTHER:PTHR43178:SF4
SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777	InterPro:Single_hybrid_motif	TIGRFAMs:TIGR01349	UniParc:UPI0008456C76
EnsemblPlantsGene:Zm00001d053580	EnsemblPlants:Zm00001d053580_P002	EnsemblPlants:Zm00001d053580_T002	SEG:seg	:	:

Description

Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex mitochondrial

Coordinates

chr4:-:235225983..235235156

Molecular Weight (calculated)

59699.2 Da

IEP (calculated)

8.001

GRAVY (calculated)

-0.333

Length

551 amino acids

Sequence
(BLAST)

001: MSATQLLRRS RKLQSLHNAV GCEKFFLFRH FSSGSGSFIA KENGVGKRTR GTRFSQHYQP TKELEPFSLG VNGNCSWRRA SNSLTPSAAS WLNGSFSCGQ
101: VVSARTFSNS ADLPPHQEIG MPSLSPTMTE GNIAKWLKKE GDKVSPGEVL CEVETNQITF ELISGGQDKA TVEMECMEEG YLAKIIHGDG AKEIKVGEVI
201: AITVEEEGDI EKFKDYKPSS SAEPVAPAES KAQPEPSQPK VEEKKLTQAP EVKAPKIEEA SQSGDRIFAS PLARKLAEDN NVPLSSVKGT GPDGRILKAD
301: IEDYLAKGGL REAFAAPGLG YVDIPNAQIR KVTANRLLAS KQTIPHYYLT VDARVDKLVK LRGELNPLQD ASGGKKISIN DLVIKAAALA LRKVPQCNSS
401: WMNDFIRQYH NVNINVAVQT EHGLFVPVIR DADKKGLGTI AEEVKQLAQK ARDNSLKPAD YEGGTFTISN LGGPFGIKQF CAIINPPQSA ILAIGSAEKR
501: VIPGSADGLY EFGSFMSATL SCDHRVIDGA IGAEFLKAFK GYIENPTSML L

Best Arabidopsis Sequence Match ( AT3G13930.1 )
(BLAST)

001: MASRIINHSK KLKHVSALLR RDHAVAVRCF SNSTHPSLVG REDIFKARLN YSSVERISKC GTGNVTMLSG ISTTSTKLSS PMAGPKLFKE FISSQMRSVR
101: GFSSSSDLPP HQEIGMPSLS PTMTEGNIAR WLKKEGDKVA PGEVLCEVET DKATVEMECM EEGFLAKIVK EEGAKEIQVG EVIAITVEDE DDIQKFKDYT
201: PSSDTGPAAP EAKPAPSLPK EEKVEKPASA PEAKISKPSS APSEDRIFAS PLARKLAEDN NVPLSSIKGT GPEGRIVKAD VEDFLASGSK ETTAKPSKQV
301: DSKVPALDYV DIPHTQIRKV TASRLAFSKQ TIPHYYLTVD TCVDKMMGLR SQLNSFQEAS GGKRISVNDL VIKAAALALR KVPQCNSSWT DEYIRQFKNV
401: NINVAVQTEN GLYVPVVKDA DKKGLSTIGE EVRFLAQKAK ENSLKPEDYE GGTFTVSNLG GPFGIKQFCA VINPPQAAIL AIGSAEKRVV PGTGPDQYNV
501: ASYMSVTLSC DHRVIDGAIG AEWLKAFKGY IETPESMLL

Arabidopsis Description

Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8RWN9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.