Factsheet for Zm00001d016365_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d016365_P002	mitochondrion, mitochondrion, mitochondrion
Zm00001d053580_P002	mitochondrion, mitochondrion, mitochondrion

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54220.1	Zm00001d016365_P002	AT1G54220.1	24846799
AT1G54220.1	Zm00001d053580_P002	AT1G54220.1	24846799
AT1G54220.1	Zm00001d016365_P002	AT3G13930.1	24846799
AT1G54220.1	Zm00001d053580_P002	AT3G13930.1	24846799
AT3G13930.1	Zm00001d016365_P002	AT3G13930.1	24846799
AT3G13930.1	Zm00001d053580_P002	AT3G13930.1	24846799

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04754	Sorghum	mitochondrion	82.66	94.62
Zm00001d053580_P002	Maize	mitochondrion	81.52	91.29
TraesCS6D01G024400.1	Wheat	golgi, mitochondrion	72.77	82.84
TraesCS6A01G022600.2	Wheat	golgi	71.47	81.97
TraesCS6B01G028600.1	Wheat	mitochondrion	70.66	81.95
HORVU6Hr1G003770.1	Barley	cytosol, mitochondrion	70.83	81.84
Os07t0410100-01	Rice	mitochondrion	71.15	81.15
Os02t0105200-01	Rice	mitochondrion	70.99	79.93
AT3G13930.1	Thale cress	mitochondrion	56.08	64.19
Solyc07g006790.2.1	Tomato	plastid	57.21	63.83
Bra001531.1-P	Field mustard	mitochondrion, plastid	48.14	63.73
KRH47526	Soybean	mitochondrion	56.4	63.62
KRH06095	Soybean	mitochondrion	56.4	63.62
Bra027386.1-P	Field mustard	mitochondrion	51.38	63.4
VIT_11s0016g01870.t01	Wine grape	mitochondrion	56.08	63.25
VIT_09s0002g01800.t01	Wine grape	mitochondrion	56.89	63.24
PGSC0003DMT400048225	Potato	mitochondrion	56.56	63.22
CDY55206	Canola	mitochondrion	51.7	62.3
Bra037976.1-P	Field mustard	mitochondrion	54.62	62.29
CDX82504	Canola	plastid	54.13	62.08
AT1G54220.1	Thale cress	mitochondrion	54.13	61.97
CDY33075	Canola	mitochondrion, plastid	55.27	61.44
CDX97529	Canola	mitochondrion	55.92	61.39
CDX75740	Canola	mitochondrion, plastid	55.27	60.78
CDY24058	Canola	mitochondrion	54.62	60.72
GSMUA_Achr10P...	Banana	mitochondrion, vacuole	58.67	57.01
Zm00001d034531_P001	Maize	mitochondrion	31.12	38.95
Zm00001d023606_P005	Maize	plastid	23.82	32.17
Zm00001d032224_P001	Maize	plastid	23.66	31.0
Zm00001d020426_P001	Maize	plastid	21.88	29.74
Zm00001d025258_P009	Maize	mitochondrion	20.91	28.92
Zm00001d050383_P001	Maize	plastid	23.66	27.97
Zm00001d003923_P002	Maize	mitochondrion	20.91	27.27
Zm00001d041839_P001	Maize	plastid	23.66	24.62
Zm00001d040670_P004	Maize	mitochondrion	19.61	23.14

Protein Annotations

KEGG:00010+2.3.1.12	KEGG:00020+2.3.1.12	KEGG:00620+2.3.1.12	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.2.1.2
Gene3D:2.40.50.100	Gene3D:3.30.559.10	Gene3D:4.10.320.10	EntrezGene:541781	UniProt:A0A1D6H6Z1	ProteinID:AQK70553.1
InterPro:Biotin_lipoyl	InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004742
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
GO:GO:0006090	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0016746
GO:GO:0045254	InterPro:IPR000089	InterPro:IPR004167	InterPro:IPR023213	InterPro:IPR036625	InterPro:LAT1
PFAM:PF00198	PFAM:PF00364	PFAM:PF02817	ScanProsite:PS00189	PFscan:PS50968	PFscan:PS51826
InterPro:PSBD	PANTHER:PTHR43178	PANTHER:PTHR43178:SF4	SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777
InterPro:Single_hybrid_motif	TIGRFAMs:TIGR01349	UniParc:UPI00084459B4	EnsemblPlantsGene:Zm00001d016365	EnsemblPlants:Zm00001d016365_P002	EnsemblPlants:Zm00001d016365_T002
SEG:seg	:	:	:	:	:

Description

dihydrolipoamide S-acetyltransferase1 dihydrolipoamide S-acetyltransferase1

Coordinates

chr5:-:159330634..159338014

Molecular Weight (calculated)

66610.9 Da

IEP (calculated)

7.480

GRAVY (calculated)

-0.149

Length

617 amino acids

Sequence
(BLAST)

001: MSAAQLLRHS RKLRSLQNPV GCENFSFVRH FSSGSGSFIA RENVLIHCMP FIVAIENVMP LVMSGIGKRT RGTRFSQHNQ PAKQLETFSA GVNGSCTWRI
101: ASNSLTPSAA SWLSGSFSCG QVVSARPFSS SAAKILACLH CIGKFEYLLI LGVVSASFLF PTLNALIPLA KAWFYAFCNN ISHTVPDLPP HQEIGMPSLS
201: PTMTEGNIAK WLKKEGDKVS PGEVLCEVET DKATVEMECM EEGYLAKIIH GDGAKEIKVG EVIAITVEEE GDIEKLKDYK PSSSAEPVAP AEPKAEPEPS
301: QPKAEEKKPT QAPEAKTPKI EEASQSGDRI FASPLARKLA EDNNVPLSSV KGTGPDGRIL KADIEDYLAS VAKGGLRESF ADPGLGYVDI PNAQIRKVTA
401: NRLLASKQTI PHYYLTVDAR VDKLVQLRGE LNPLQDASGG KKISINDLVI KAAALALRKV PQCNSSWMND FIRQYHNVNI NVAVQTEHGL FVPVIRDADK
501: KGLGAIAEEV KQLAQKARDN SLKPADYEGG TFTVSNLGGP FGIKQFCAII NPPQSAILAI GSAEKRVIPG SADGQFEFGS FMSATLSCDH RVIDGAIGAE
601: FLKAFKGYIE NPTSMLL

Best Arabidopsis Sequence Match ( AT1G54220.2 )
(BLAST)

001: MAYASRIINH SKKLKDVSTL LRRENAATIR YYSNTNRAPL NREDTFNSRL GYPPLERISI CSTSTLPVSI IFSTTRSNLS SAMGRPIFGK EFSCLMQSAR
101: GFSSGSDLPP HQEIGMPSLS PTMTEGNIAR WLKKEGDKVA PGEVLCEVET DKATVEMECM EEGYLAKIVK AEGSKEIQVG EVIAITVEDE EDIGKFKDYT
201: PSSTADAAPT KAEPTPAPPK EEKVKQPSSP PEPKASKPST PPTGDRVFAS PLARKLAEDN NVPLSDIEGT GPEGRIVKAD IDEYLASSGK GATAKPSKST
301: DSKAPALDYV DIPHSQIRKV TASRLAFSKQ TIPHYYLTVD TCVDKLMALR SQLNSFKEAS GGKRISVNDL VVKAAALALR KVPQCNSSWT DDYIRQFKNV
401: NINVAVQTEN GLYVPVVKDA DRKGLSTIGE EVRLLAQKAK ENSLKPEDYE GGTFTVSNLG GPFGIKQFCA VVNPPQAAIL AVGSAEKRVV PGNGPDQFNF
501: ASYMPVTLSC DHRVVDGAIG AEWLKAFKGY IENPKSMLL

Arabidopsis Description

Acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:A0A178W5Y1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.