Factsheet for Bra027386.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001531.1-P	mitochondrion
Bra027386.1-P	mitochondrion

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13930.1	Bra001531.1-P	AT3G13930.1	24846799
AT3G13930.1	Bra027386.1-P	AT3G13930.1	24846799

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55206	Canola	mitochondrion	95.0	92.77
CDX97529	Canola	mitochondrion	98.0	87.19
Bra001531.1-P	Field mustard	mitochondrion, plastid	78.4	84.12
AT3G13930.1	Thale cress	mitochondrion	90.0	83.49
Bra037976.1-P	Field mustard	mitochondrion	78.2	72.27
VIT_11s0016g01870.t01	Wine grape	mitochondrion	68.8	62.89
VIT_09s0002g01800.t01	Wine grape	mitochondrion	69.8	62.88
KRH47526	Soybean	mitochondrion	68.2	62.34
KRH06095	Soybean	mitochondrion	68.2	62.34
PGSC0003DMT400048225	Potato	mitochondrion	67.2	60.87
Solyc07g006790.2.1	Tomato	plastid	67.2	60.76
EES04754	Sorghum	mitochondrion	62.2	57.7
HORVU6Hr1G003770.1	Barley	cytosol, mitochondrion	61.2	57.3
TraesCS6D01G024400.1	Wheat	golgi, mitochondrion	62.0	57.2
TraesCS6B01G028600.1	Wheat	mitochondrion	60.8	57.14
TraesCS6A01G022600.2	Wheat	golgi	61.2	56.88
TraesCS7D01G011600.1	Wheat	golgi, mitochondrion	60.6	56.01
TraesCS4A01G481800.3	Wheat	mitochondrion, unclear	60.2	55.84
TraesCS7A01G014600.4	Wheat	golgi, mitochondrion	60.2	55.64
Os07t0410100-01	Rice	mitochondrion	60.2	55.64
Os06t0105400-02	Rice	mitochondrion	61.2	55.64
Zm00001d053580_P002	Maize	mitochondrion	61.2	55.54
Os02t0105200-01	Rice	mitochondrion	60.2	54.93
HORVU7Hr1G001330.9	Barley	plastid	59.8	51.82
Zm00001d016365_P002	Maize	mitochondrion	63.4	51.38
GSMUA_Achr10P...	Banana	mitochondrion, vacuole	62.6	49.29
Bra028057.1-P	Field mustard	plastid	28.6	31.43
Bra025167.1-P	Field mustard	plastid	28.4	29.77
Bra017345.1-P	Field mustard	plastid	28.4	29.65
Bra033446.1-P	Field mustard	mitochondrion	38.0	29.64
Bra035551.1-P	Field mustard	mitochondrion	23.0	26.44
Bra002934.1-P	Field mustard	mitochondrion	23.0	24.68
Bra016809.1-P	Field mustard	mitochondrion, plastid	23.0	24.21
Bra028992.1-P	Field mustard	mitochondrion	23.0	23.28
Bra001220.1-P	Field mustard	mitochondrion	23.0	23.28
Bra006910.1-P	Field mustard	mitochondrion	33.6	23.01
Bra040295.1-P	Field mustard	mitochondrion	7.2	14.01

Protein Annotations

KEGG:00010+2.3.1.12	KEGG:00020+2.3.1.12	KEGG:00620+2.3.1.12	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.2.1.2
Gene3D:2.40.50.100	Gene3D:3.30.559.10	Gene3D:4.10.320.10	InterPro:Biotin_lipoyl	EnsemblPlantsGene:Bra027386	EnsemblPlants:Bra027386.1
EnsemblPlants:Bra027386.1-P	InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004742
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
GO:GO:0006090	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0016746
GO:GO:0045254	InterPro:IPR000089	InterPro:IPR004167	InterPro:IPR023213	InterPro:IPR036625	InterPro:LAT1
UniProt:M4EF24	PFAM:PF00198	PFAM:PF00364	PFAM:PF02817	ScanProsite:PS00189	PFscan:PS50968
PFscan:PS51826	InterPro:PSBD	PANTHER:PTHR43178	PANTHER:PTHR43178:SF1	SUPFAM:SSF47005	SUPFAM:SSF51230
SUPFAM:SSF52777	InterPro:Single_hybrid_motif	TIGRFAMs:TIGR01349	UniParc:UPI0002547EC1	SEG:seg	:

Description

AT3G13930 (E=5e-120) | dihydrolipoamide S-acetyltransferase, putative

Coordinates

chrA05:-:20645279..20648844

Molecular Weight (calculated)

54398.9 Da

IEP (calculated)

8.241

GRAVY (calculated)

-0.392

Length

500 amino acids

Sequence
(BLAST)

001: MVYASRIISH SKKLKHVSTL LRREHAVAVR GFSNTTQPSL TGREDMLKTR LNYSPAERIS KCSASNVPIP SGISAMRTKP MTGPTFFREY ISSQMRSGNI
101: ARWLKKEGDK VAPGEVLCEV ETDKATVEME CMEEGYLAKI VKEEGAKEIQ VGEVIAITVE EEEDIQKFKD YTPSSGTPPA PEEKPAPSPP KEEKVEKPAS
201: APEAKTSKPS SAPSEDRIFA SPLAKKLAED SNVPLSSIKG TGPEGRIVKA DVEEFLASRG KETTAKPSKP TDSKVPALDY VTASRLAFSK QTIPHYYLTV
301: DTCVDKLMGL RSQLNSFQEA SGGKRISVND LVIKAAALAL RKVPQCNSSW TDEYIRQFSN VNINVAVQTE NGLYVPVVKD ADKKGLSKIG EEVRFLAQKA
401: KENSLKPEDY EGGTFTVSNL GGPFGIKQFC AVINPPQAAI LAIGSAEKRV VAGSGPDQFN VASYMSVTLS CDHRVIDGAI GAEWLKAFKG YIETPESMLL

Best Arabidopsis Sequence Match ( AT3G13930.1 )
(BLAST)

001: MASRIINHSK KLKHVSALLR RDHAVAVRCF SNSTHPSLVG REDIFKARLN YSSVERISKC GTGNVTMLSG ISTTSTKLSS PMAGPKLFKE FISSQMRSVR
101: GFSSSSDLPP HQEIGMPSLS PTMTEGNIAR WLKKEGDKVA PGEVLCEVET DKATVEMECM EEGFLAKIVK EEGAKEIQVG EVIAITVEDE DDIQKFKDYT
201: PSSDTGPAAP EAKPAPSLPK EEKVEKPASA PEAKISKPSS APSEDRIFAS PLARKLAEDN NVPLSSIKGT GPEGRIVKAD VEDFLASGSK ETTAKPSKQV
301: DSKVPALDYV DIPHTQIRKV TASRLAFSKQ TIPHYYLTVD TCVDKMMGLR SQLNSFQEAS GGKRISVNDL VIKAAALALR KVPQCNSSWT DEYIRQFKNV
401: NINVAVQTEN GLYVPVVKDA DKKGLSTIGE EVRFLAQKAK ENSLKPEDYE GGTFTVSNLG GPFGIKQFCA VINPPQAAIL AIGSAEKRVV PGTGPDQYNV
501: ASYMSVTLSC DHRVIDGAIG AEWLKAFKGY IETPESMLL

Arabidopsis Description

Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8RWN9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.