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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027386.1-P Field mustard mitochondrion 83.49 90.0
CDY55206 Canola mitochondrion 83.3 87.7
CDX82504 Canola plastid 86.46 86.62
CDX97529 Canola mitochondrion 89.98 86.3
CDX75740 Canola mitochondrion, plastid 88.87 85.38
Bra001531.1-P Field mustard mitochondrion, plastid 73.65 85.19
AT1G54220.1 Thale cress mitochondrion 80.15 80.15
KRH06095 Soybean mitochondrion 68.65 67.64
VIT_09s0002g01800.t01 Wine grape mitochondrion 69.57 67.57
KRH47526 Soybean mitochondrion 68.46 67.46
VIT_11s0016g01870.t01 Wine grape mitochondrion 67.72 66.73
PGSC0003DMT400048225 Potato mitochondrion 67.72 66.12
Solyc07g006790.2.1 Tomato plastid 67.72 66.0
EES04754 Sorghum mitochondrion 64.01 64.01
TraesCS6B01G028600.1 Wheat mitochondrion 63.08 63.91
HORVU6Hr1G003770.1 Barley cytosol, mitochondrion 63.27 63.86
TraesCS6D01G024400.1 Wheat golgi, mitochondrion 64.01 63.65
TraesCS6A01G022600.2 Wheat golgi 63.27 63.38
TraesCS7D01G011600.1 Wheat golgi, mitochondrion 62.15 61.92
TraesCS4A01G481800.3 Wheat mitochondrion, unclear 61.78 61.78
Zm00001d053580_P002 Maize mitochondrion 63.08 61.71
Os06t0105400-02 Rice mitochondrion 62.89 61.64
TraesCS7A01G014600.4 Wheat golgi, mitochondrion 61.6 61.37
Os02t0105200-01 Rice mitochondrion 61.97 60.95
Os07t0410100-01 Rice mitochondrion 60.85 60.63
HORVU7Hr1G001330.9 Barley plastid 61.22 57.19
Zm00001d016365_P002 Maize mitochondrion 64.19 56.08
GSMUA_Achr10P... Banana mitochondrion, vacuole 63.27 53.7
AT1G34430.1 Thale cress plastid 27.27 31.61
AT3G25860.1 Thale cress plastid 27.27 30.62
AT3G52200.2 Thale cress mitochondrion 36.36 27.49
AT4G26910.1 Thale cress mitochondrion 23.56 27.37
AT5G55070.1 Thale cress mitochondrion 23.38 27.16
AT3G06850.1 Thale cress mitochondrion, plastid 23.75 26.5
Protein Annotations
KEGG:00010+2.3.1.12KEGG:00020+2.3.1.12KEGG:00620+2.3.1.12InterPro:2-oxoA_DH_lipoyl-BSInterPro:2-oxoacid_DH_actylTfraseMapMan:2.2.1.2
Gene3D:2.40.50.100Gene3D:3.30.559.10Gene3D:4.10.320.10EntrezGene:820606ProteinID:AEE75442.1EMBL:AF367302
ArrayExpress:AT3G13930EnsemblPlantsGene:AT3G13930RefSeq:AT3G13930TAIR:AT3G13930RefSeq:AT3G13930-TAIR-GEnsemblPlants:AT3G13930.1
TAIR:AT3G13930.1EMBL:AY091691EMBL:AY092968Unigene:At.21338ProteinID:BAB02323.1EMBL:BT000444
EMBL:BT000702EMBL:BT001223InterPro:Biotin_lipoylInterPro:CAT-like_dom_sfInterPro:E3-bd_dom_sfGO:GO:0003674
GO:GO:0003824GO:GO:0004742GO:GO:0005488GO:GO:0005507GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005759GO:GO:0005975GO:GO:0006090
GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009058GO:GO:0009507GO:GO:0009536GO:GO:0009941GO:GO:0009987GO:GO:0016740
GO:GO:0016746GO:GO:0045254InterPro:IPR000089InterPro:IPR004167InterPro:IPR023213InterPro:IPR036625
InterPro:LAT1RefSeq:NP_566470.1PFAM:PF00198PFAM:PF00364PFAM:PF02817PO:PO:0000005
PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025281ScanProsite:PS00189PFscan:PS50968PFscan:PS51826InterPro:PSBDPANTHER:PTHR43178
PANTHER:PTHR43178:SF1UniProt:Q8RWN9SUPFAM:SSF47005SUPFAM:SSF51230SUPFAM:SSF52777InterPro:Single_hybrid_motif
TIGRFAMs:TIGR01349UniParc:UPI00000ABFF3::::
Description
Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8RWN9]
Coordinates
chr3:+:4595767..4600469
Molecular Weight (calculated)
58470.8 Da
IEP (calculated)
7.754
GRAVY (calculated)
-0.337
Length
539 amino acids
Sequence
(BLAST)
001: MASRIINHSK KLKHVSALLR RDHAVAVRCF SNSTHPSLVG REDIFKARLN YSSVERISKC GTGNVTMLSG ISTTSTKLSS PMAGPKLFKE FISSQMRSVR
101: GFSSSSDLPP HQEIGMPSLS PTMTEGNIAR WLKKEGDKVA PGEVLCEVET DKATVEMECM EEGFLAKIVK EEGAKEIQVG EVIAITVEDE DDIQKFKDYT
201: PSSDTGPAAP EAKPAPSLPK EEKVEKPASA PEAKISKPSS APSEDRIFAS PLARKLAEDN NVPLSSIKGT GPEGRIVKAD VEDFLASGSK ETTAKPSKQV
301: DSKVPALDYV DIPHTQIRKV TASRLAFSKQ TIPHYYLTVD TCVDKMMGLR SQLNSFQEAS GGKRISVNDL VIKAAALALR KVPQCNSSWT DEYIRQFKNV
401: NINVAVQTEN GLYVPVVKDA DKKGLSTIGE EVRFLAQKAK ENSLKPEDYE GGTFTVSNLG GPFGIKQFCA VINPPQAAIL AIGSAEKRVV PGTGPDQYNV
501: ASYMSVTLSC DHRVIDGAIG AEWLKAFKGY IETPESMLL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.