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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G55070.1 Thale cress mitochondrion 82.76 82.76
Solyc12g005080.1.1 Tomato nucleus 62.5 78.38
VIT_19s0090g00750.t01 Wine grape cytosol 59.91 70.92
Solyc07g064800.2.1 Tomato extracellular, nucleus 70.91 70.3
PGSC0003DMT400057449 Potato mitochondrion 70.47 69.87
PGSC0003DMT400071652 Potato mitochondrion 70.26 69.21
GSMUA_Achr3P18670_001 Banana mitochondrion 67.24 69.03
GSMUA_AchrUn_... Banana mitochondrion 67.24 69.03
Os02t0514700-00 Rice mitochondrion 58.41 68.09
VIT_10s0116g01480.t01 Wine grape mitochondrion 68.75 67.44
Os04t0394200-01 Rice mitochondrion 63.79 67.27
KRH14369 Soybean nucleus 66.81 66.81
TraesCS4D01G070200.1 Wheat mitochondrion 62.93 66.67
KRH73773 Soybean mitochondrion 66.59 66.59
TraesCS4B01G071300.1 Wheat mitochondrion 62.72 66.44
TraesCS4A01G243500.1 Wheat golgi, mitochondrion, unclear 62.5 66.21
TraesCS2D01G039500.2 Wheat mitochondrion 62.93 65.62
TraesCS2A01G041100.1 Wheat golgi, nucleus, unclear 62.72 65.39
Zm00001d025258_P009 Maize mitochondrion 62.5 65.02
TraesCS2B01G053600.1 Wheat mitochondrion 59.7 64.87
OQU93042 Sorghum mitochondrion 64.22 63.81
GSMUA_Achr9P01190_001 Banana cytosol 67.67 63.18
Zm00001d003923_P002 Maize mitochondrion 62.5 61.31
HORVU4Hr1G011850.1 Barley mitochondrion, plastid 62.28 60.71
AT3G13930.1 Thale cress mitochondrion 27.37 23.56
AT1G54220.1 Thale cress mitochondrion 26.29 22.63
AT3G25860.1 Thale cress plastid 20.26 19.58
AT1G34430.1 Thale cress plastid 18.97 18.92
AT3G06850.1 Thale cress mitochondrion, plastid 19.18 18.43
Os01t0314100-01 Rice mitochondrion 20.47 18.16
AT3G52200.2 Thale cress mitochondrion 26.94 17.53
Os01t0314000-01 Rice cytosol 0.86 0.75
Protein Annotations
KEGG:00020+2.3.1.61KEGG:00310+2.3.1.61InterPro:2-oxoA_DH_lipoyl-BSInterPro:2-oxoacid_DH_actylTfraseMapMan:2.3.4.2Gene3D:2.40.50.100
Gene3D:3.30.559.10EntrezGene:828798ProteinID:AEE85267.1ProteinID:AEE85268.1ProteinID:AEE85269.1EMBL:AK317635
ArrayExpress:AT4G26910EnsemblPlantsGene:AT4G26910RefSeq:AT4G26910TAIR:AT4G26910RefSeq:AT4G26910-TAIR-GEnsemblPlants:AT4G26910.1
TAIR:AT4G26910.1EMBL:AY084248EMBL:AY096643Unigene:At.48904EMBL:BT000926InterPro:Biotin_lipoyl
ProteinID:CAB36537.1ProteinID:CAB79546.1InterPro:CAT-like_dom_sfGO:GO:0003674GO:GO:0003824GO:GO:0004149
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0006091GO:GO:0006099GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009056
GO:GO:0009987GO:GO:0016020GO:GO:0016740GO:GO:0016746GO:GO:0033512GO:GO:0045252
InterPro:IPR000089InterPro:IPR023213RefSeq:NP_567761.1RefSeq:NP_849452.1RefSeq:NP_849453.1PFAM:PF00198
PFAM:PF00364PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281ScanProsite:PS00189
PFscan:PS50968PANTHER:PTHR43416PANTHER:PTHR43416:SF5UniProt:Q8H107SUPFAM:SSF51230SUPFAM:SSF52777
InterPro:Single_hybrid_motifInterPro:SucBTIGRFAMs:TIGR01347UniParc:UPI0000162B27SEG:seg:
Description
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8H107]
Coordinates
chr4:-:13519811..13523222
Molecular Weight (calculated)
50062.1 Da
IEP (calculated)
9.631
GRAVY (calculated)
-0.251
Length
464 amino acids
Sequence
(BLAST)
001: MMMRAVIRRA ASNGSSPSLF AKSLQSSRVA ASSPSLLSGS ETGAYLHRGN HAHSFHNLAL PAGNSGISRS ASLVSSTLQR WVRPFSAETG DTVEAVVPHM
101: GESITDGTLA TFLKKPGERV QADEAIAQIE TDKVTIDIAS PASGVIQEFL VNEGDTVEPG TKVAIISKSE DTASQVTPSQ KIPETTDTKP SPPAEDKQKP
201: RVESAPVAEK PKAPSSPPPP KQSAKEPQLP PKERERRVPM TRLRKRVATR LKDSQNTFAL LTTFNEVDMT NLMKLRSQYK DAFYEKHGVK LGLMSGFIKA
301: AVSALQHQPV VNAVIDGDDI IYRDYVDISI AVGTSKGLVV PVIRGADKMN FAEIEKTINS LAKKANEGTI SIDEMAGGSF TVSNGGVYGS LISTPIINPP
401: QSAILGMHSI VSRPMVVGGS VVPRPMMYVA LTYDHRLIDG REAVYFLRRV KDVVEDPQRL LLDI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.