Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03145 | Canola | plastid | 84.52 | 86.18 |
| CDY12039 | Canola | plastid | 82.37 | 85.11 |
| Bra028057.1-P | Field mustard | plastid | 83.01 | 84.84 |
| KRG91819 | Soybean | endoplasmic reticulum, nucleus | 77.85 | 77.85 |
| VIT_18s0072g01000.t01 | Wine grape | plastid | 79.35 | 77.36 |
| KRH34962 | Soybean | plastid | 77.85 | 77.19 |
| PGSC0003DMT400023831 | Potato | plastid | 73.55 | 73.71 |
| TraesCS5D01G126000.1 | Wheat | cytosol | 64.52 | 73.53 |
| Solyc11g017250.1.1 | Tomato | plastid | 73.33 | 72.86 |
| Zm00001d023606_P005 | Maize | plastid | 69.03 | 70.24 |
| OQU78843 | Sorghum | plastid | 69.03 | 70.09 |
| TraesCS5A01G119600.1 | Wheat | plastid | 68.6 | 69.96 |
| TraesCS5B01G116300.1 | Wheat | golgi, unclear | 68.6 | 69.5 |
| Os12t0182200-01 | Rice | plastid | 69.03 | 68.74 |
| GSMUA_Achr3P17420_001 | Banana | cytosol | 34.62 | 64.66 |
| AT3G25860.1 | Thale cress | plastid | 60.86 | 58.96 |
| Zm00001d041839_P001 | Maize | plastid | 69.03 | 54.13 |
| HORVU5Hr1G038090.3 | Barley | plastid | 47.96 | 51.74 |
| AT3G13930.1 | Thale cress | mitochondrion | 31.61 | 27.27 |
| AT1G54220.1 | Thale cress | mitochondrion | 30.54 | 26.35 |
| AT3G06850.1 | Thale cress | mitochondrion, plastid | 21.94 | 21.12 |
| AT5G55070.1 | Thale cress | mitochondrion | 19.35 | 19.4 |
| AT4G26910.1 | Thale cress | mitochondrion | 18.92 | 18.97 |
| AT3G52200.2 | Thale cress | mitochondrion | 28.39 | 18.51 |
| TraesCS5D01G125900.1 | Wheat | plastid | 2.37 | 3.61 |
Protein Annotations
| InterPro:2-oxoA_DH_lipoyl-BS | InterPro:2-oxoacid_DH_actylTfrase | Gene3D:2.40.50.100 | Gene3D:3.30.559.10 | Gene3D:4.10.320.10 | MapMan:5.1.2.2.2 |
| EntrezGene:840346 | UniProt:A0A178W4F9 | ProteinID:AAF79262.1 | ProteinID:AAG51893.1 | ProteinID:AEE31713.1 | ArrayExpress:AT1G34430 |
| EnsemblPlantsGene:AT1G34430 | RefSeq:AT1G34430 | TAIR:AT1G34430 | RefSeq:AT1G34430-TAIR-G | EnsemblPlants:AT1G34430.1 | TAIR:AT1G34430.1 |
| EMBL:AY084265 | EMBL:AY128294 | Unigene:At.15055 | EMBL:BT001042 | InterPro:Biotin_lipoyl | InterPro:CAT-like_dom_sf |
| ncoils:Coil | InterPro:E3-bd_dom_sf | Symbol:EMB3003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004742 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0006091 | GO:GO:0006096 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0019904 | GO:GO:0022626 | InterPro:IPR000089 | InterPro:IPR004167 | InterPro:IPR023213 |
| InterPro:IPR036625 | RefSeq:NP_174703.1 | ProteinID:OAP12415.1 | PFAM:PF00198 | PFAM:PF00364 | PFAM:PF02817 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00189 | PFscan:PS50968 | PFscan:PS51826 | InterPro:PSBD |
| PANTHER:PTHR23151 | PANTHER:PTHR23151:SF61 | UniProt:Q9C8P0 | SUPFAM:SSF47005 | SUPFAM:SSF51230 | SUPFAM:SSF52777 |
| InterPro:Single_hybrid_motif | UniParc:UPI00000AC6FD | SEG:seg | : | : | : |
Description
EMB3003Dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C8P0]
Coordinates
chr1:-:12587726..12590223
Molecular Weight (calculated)
48309.5 Da
IEP (calculated)
9.299
GRAVY (calculated)
0.131
Length
465 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRLLQTPFL PSVSLPTKTR SSVTGFRVKP RIIPIQAKIR EIFMPALSST MTEGKIVSWV KSEGDKLNKG ESVVVVESDK ADMDVETFYD GYLAAIMVEE
101: GGVAPVGSAI ALLAETEDEI ADAKAKASGG GGGGDSKAPP ASPPTAAVEA PVSVEKKVAA APVSIKAVAA SAVHPASEGG KRIVASPYAK KLAKELKVEL
201: AGLVGSGPMG RIVAKDVEAV AAGGGVQAAV AVKEVVAAPG VELGSVVPFT TMQGAVSRNM VESLGVPTFR VGYTISTDAL DALYKKIKSK GVTMTALLAK
301: ATALALAKHP VVNSSCRDGN SFVYNSSINV AVAVAIDGGL ITPVLQNADK VDIYSLSRKW KELVDKARAK QLQPQEYNTG TFTLSNLGMF GVDRFDAILP
401: PGTGAIMAVG ASQPSVVATK DGRIGMKNQM QVNVTADHRV IYGADLAQFL QTLASIIEDP KDLTF
101: GGVAPVGSAI ALLAETEDEI ADAKAKASGG GGGGDSKAPP ASPPTAAVEA PVSVEKKVAA APVSIKAVAA SAVHPASEGG KRIVASPYAK KLAKELKVEL
201: AGLVGSGPMG RIVAKDVEAV AAGGGVQAAV AVKEVVAAPG VELGSVVPFT TMQGAVSRNM VESLGVPTFR VGYTISTDAL DALYKKIKSK GVTMTALLAK
301: ATALALAKHP VVNSSCRDGN SFVYNSSINV AVAVAIDGGL ITPVLQNADK VDIYSLSRKW KELVDKARAK QLQPQEYNTG TFTLSNLGMF GVDRFDAILP
401: PGTGAIMAVG ASQPSVVATK DGRIGMKNQM QVNVTADHRV IYGADLAQFL QTLASIIEDP KDLTF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.