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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 4
  • cytosol 1
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion, plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035551.1-P Field mustard mitochondrion 86.85 92.64
CDY17300 Canola mitochondrion 92.89 92.49
Bra002934.1-P Field mustard mitochondrion 92.89 92.49
CDY20790 Canola mitochondrion 91.81 91.61
CDY19918 Canola mitochondrion 91.38 91.38
CDY06613 Canola mitochondrion 90.95 90.56
Bra028992.1-P Field mustard mitochondrion 91.59 86.03
AT4G26910.1 Thale cress mitochondrion 82.76 82.76
CDY12012 Canola plastid 91.81 81.61
CDY36727 Canola plastid 92.46 80.19
Solyc12g005080.1.1 Tomato nucleus 63.58 79.73
VIT_19s0090g00750.t01 Wine grape cytosol 60.78 71.94
PGSC0003DMT400071652 Potato mitochondrion 72.63 71.55
Solyc07g064800.2.1 Tomato extracellular, nucleus 71.34 70.73
PGSC0003DMT400057449 Potato mitochondrion 70.69 70.09
VIT_10s0116g01480.t01 Wine grape mitochondrion 71.34 69.98
Os04t0394200-01 Rice mitochondrion 65.95 69.55
Os02t0514700-00 Rice mitochondrion 59.48 69.35
TraesCS4D01G070200.1 Wheat mitochondrion 65.3 69.18
TraesCS4B01G071300.1 Wheat mitochondrion 65.09 68.95
GSMUA_Achr3P18670_001 Banana mitochondrion 67.03 68.81
TraesCS2D01G039500.2 Wheat mitochondrion 65.95 68.76
KRH14369 Soybean nucleus 68.75 68.75
TraesCS4A01G243500.1 Wheat golgi, mitochondrion, unclear 64.87 68.72
TraesCS2A01G041100.1 Wheat golgi, nucleus, unclear 65.73 68.54
TraesCS2B01G053600.1 Wheat mitochondrion 62.72 68.15
GSMUA_AchrUn_... Banana mitochondrion 66.38 68.14
KRH73773 Soybean mitochondrion 68.1 68.1
Zm00001d025258_P009 Maize mitochondrion 64.66 67.26
OQU93042 Sorghum mitochondrion 65.95 65.52
Zm00001d003923_P002 Maize mitochondrion 64.66 63.42
GSMUA_Achr9P01190_001 Banana cytosol 67.67 63.18
HORVU4Hr1G011850.1 Barley mitochondrion, plastid 64.66 63.03
AT3G13930.1 Thale cress mitochondrion 27.16 23.38
AT1G54220.1 Thale cress mitochondrion 26.29 22.63
AT3G25860.1 Thale cress plastid 20.26 19.58
AT1G34430.1 Thale cress plastid 19.4 19.35
AT3G06850.1 Thale cress mitochondrion, plastid 19.61 18.84
Os01t0314100-01 Rice mitochondrion 20.04 17.78
AT3G52200.2 Thale cress mitochondrion 26.72 17.39
Os01t0314000-01 Rice cytosol 0.86 0.75
Protein Annotations
KEGG:00020+2.3.1.61KEGG:00310+2.3.1.61InterPro:2-oxoA_DH_lipoyl-BSInterPro:2-oxoacid_DH_actylTfraseMapMan:2.3.4.2Gene3D:2.40.50.100
Gene3D:3.30.559.10EntrezGene:835598ProteinID:AED96577.1EMBL:AJ223803ProteinID:ANM68999.1ArrayExpress:AT5G55070
EnsemblPlantsGene:AT5G55070RefSeq:AT5G55070TAIR:AT5G55070RefSeq:AT5G55070-TAIR-GEnsemblPlants:AT5G55070.1TAIR:AT5G55070.1
EMBL:AY042897EMBL:AY128726Unigene:At.20476ProteinID:BAB08576.1InterPro:Biotin_lipoylInterPro:CAT-like_dom_sf
GO:GO:0003674GO:GO:0003824GO:GO:0004149GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005829GO:GO:0005840GO:GO:0006091
GO:GO:0006099GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0008270
GO:GO:0009056GO:GO:0009987GO:GO:0016740GO:GO:0016746GO:GO:0022626GO:GO:0033512
GO:GO:0045252InterPro:IPR000089InterPro:IPR023213RefSeq:NP_001330709.1RefSeq:NP_200318.1PFAM:PF00198
PFAM:PF00364PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230
PO:PO:0000293PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001170
PO:PO:0001185PO:PO:0004507PO:PO:0005052PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195
PO:PO:0025281ScanProsite:PS00189PFscan:PS50968PANTHER:PTHR43416PANTHER:PTHR43416:SF5UniProt:Q9FLQ4
SUPFAM:SSF51230SUPFAM:SSF52777InterPro:Single_hybrid_motifInterPro:SucBTIGRFAMs:TIGR01347UniParc:UPI00000AB9FD
SEG:seg:::::
Description
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLQ4]
Coordinates
chr5:+:22347211..22350827
Molecular Weight (calculated)
50136.4 Da
IEP (calculated)
9.669
GRAVY (calculated)
-0.251
Length
464 amino acids
Sequence
(BLAST)
001: MMLRAVFRRA SIRGSSSASG LGKSLQSSRV AVSAQFHSVS ATETLVPRGN HAHSFHHRSC PGCPDCSRTI INGYQGTALQ RWVRPFSSDS GDVVEAVVPH
101: MGESITDGTL AAFLKKPGDR VEADEAIAQI ETDKVTIDIA SPASGVIQEF LVKEGDTVEP GNKVARISTS ADAVSHVAPS EKAPEKPAPK PSPPAEKPKV
201: ESTKVAEKPK APSPPPPPPS KQSAKEPQLP PKDRERRVPM TRLRKRVATR LKDSQNTFAL LTTFNEVDMT NLMKLRSQYK DAFLEKHGVK LGLMSGFIKA
301: AVSALQHQPV VNAVIDGDDI IYRDYVDISI AVGTSKGLVV PVIRDADKMN FADIEKTING LAKKATEGTI SIDEMAGGSF TVSNGGVYGS LISTPIINPP
401: QSAILGMHSI VQRPMVVGGS VVPRPMMYVA LTYDHRLIDG REAVYFLRRI KDVVEDPQRL LLDI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.