CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002934.1-P	Field mustard	mitochondrion	100.0	100.0
CDY19918	Canola	mitochondrion	95.92	96.34
CDY20790	Canola	mitochondrion	95.06	95.27
CDY06613	Canola	mitochondrion	94.85	94.85
AT5G55070.1	Thale cress	mitochondrion	92.49	92.89
CDY12012	Canola	plastid	92.49	82.57
CDY36727	Canola	plastid	93.35	81.31
Solyc12g005080.1.1	Tomato	nucleus	62.66	78.92
VIT_19s0090g00750.t01	Wine grape	cytosol	60.3	71.68
VIT_10s0116g01480.t01	Wine grape	mitochondrion	72.32	71.25
Solyc07g064800.2.1	Tomato	extracellular, nucleus	71.46	71.15
PGSC0003DMT400071652	Potato	mitochondrion	71.67	70.91
PGSC0003DMT400057449	Potato	mitochondrion	70.6	70.3
Os04t0394200-01	Rice	mitochondrion	66.09	70.0
GSMUA_Achr3P18670_001	Banana	mitochondrion	67.6	69.69
Os02t0514700-00	Rice	mitochondrion	59.44	69.6
TraesCS4D01G070200.1	Wheat	mitochondrion	65.24	69.41
TraesCS4B01G071300.1	Wheat	mitochondrion	65.24	69.41
KRH14369	Soybean	nucleus	68.88	69.18
TraesCS4A01G243500.1	Wheat	golgi, mitochondrion, unclear	65.02	69.18
GSMUA_AchrUn_...	Banana	mitochondrion	66.95	69.03
TraesCS2D01G039500.2	Wheat	mitochondrion	65.67	68.76
KRH73773	Soybean	mitochondrion	68.45	68.75
TraesCS2A01G041100.1	Wheat	golgi, nucleus, unclear	65.45	68.54
TraesCS2B01G053600.1	Wheat	mitochondrion	62.66	68.38
Zm00001d025258_P009	Maize	mitochondrion	64.81	67.71
CDY31217	Canola	mitochondrion, plastid	69.74	67.57
CDY21016	Canola	mitochondrion, plastid	68.67	67.23
OQU93042	Sorghum	mitochondrion	65.67	65.52
GSMUA_Achr9P01190_001	Banana	cytosol	68.24	63.98
Zm00001d003923_P002	Maize	mitochondrion	64.81	63.85
HORVU4Hr1G011850.1	Barley	mitochondrion, plastid	64.81	63.45
CDX73652	Canola	mitochondrion	12.45	31.02
CDY55206	Canola	mitochondrion	25.54	23.24
CDX82504	Canola	plastid	26.61	23.05
CDX75740	Canola	mitochondrion, plastid	27.47	22.82
CDX97529	Canola	mitochondrion	27.25	22.6
CDY33075	Canola	mitochondrion, plastid	26.61	22.34
CDY24058	Canola	mitochondrion	26.39	22.16
CDY23198	Canola	mitochondrion	8.15	20.99
CDX83563	Canola	plastid	20.6	20.17
CDY13593	Canola	plastid	20.6	20.13
CDY03145	Canola	plastid	19.53	19.96
CDX95323	Canola	mitochondrion	27.04	19.66
CDY04184	Canola	plastid	20.17	19.62
CDY39183	Canola	plastid	19.74	19.49
CDY12039	Canola	plastid	18.67	19.33
CDX74077	Canola	mitochondrion, plastid	19.74	19.25
CDY08029	Canola	mitochondrion	19.96	19.18
CDY23199	Canola	mitochondrion, plastid	26.82	18.14
Os01t0314100-01	Rice	mitochondrion	19.96	17.78
CDY34925	Canola	mitochondrion	6.65	12.06
CDY69187	Canola	cytosol, nucleus	3.22	2.38
CDY17299	Canola	cytosol, plastid	3.22	2.26
Os01t0314000-01	Rice	cytosol	0.86	0.75

Protein Annotations

KEGG:00020+2.3.1.61	KEGG:00310+2.3.1.61	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.3.4.2	Gene3D:2.40.50.100
Gene3D:3.30.559.10	GO:A0A078FRZ0	UniProt:A0A078FRZ0	InterPro:Biotin_lipoyl	InterPro:CAT-like_dom_sf	EnsemblPlants:CDY17300
ProteinID:CDY17300	ProteinID:CDY17300.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004149	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0016746	GO:GO:0045252	EnsemblPlantsGene:GSBRNA2T00095389001
InterPro:IPR000089	InterPro:IPR023213	PFAM:PF00198	PFAM:PF00364	ScanProsite:PS00189	PFscan:PS50968
PANTHER:PTHR43416	PANTHER:PTHR43416:SF5	MetaCyc:PWY-5084	SUPFAM:SSF51230	SUPFAM:SSF52777	InterPro:Single_hybrid_motif
InterPro:SucB	TIGRFAMs:TIGR01347	UniPathway:UPA00868	UniParc:UPI000254429D	SEG:seg	:

Description

BnaA10g09340DBnaA10g09340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FRZ0]

Coordinates

chrLK032072:+:140202..143739

Molecular Weight (calculated)

50253.4 Da

IEP (calculated)

9.594

GRAVY (calculated)

-0.238

Length

466 amino acids

Sequence
(BLAST)

001: MMLRAVIRRA STRGGSSASS GLGKSLQSSR VAASSQSFHS LSATQTLVPR GSHARSCFHH RSCPGCSECS RTVLASFQGT TLQRWVRPFS SDSGDVVEAV
101: VPHMGESITD GTLANFLKKP GDRVEADEAI AQIETDKVTI DIASPASGVI QEFLVKEGDT VEPGNKVAII SKSADAVSHV APSEKIPEKA TPKPSPPTEE
201: PKVESTKAAE KPKASPPPPP PSKQSAKEPQ LPPKDRERRV PMTRLRKRVA TRLKDSQNTF ALLTTFNEVD MTNLMKLRSQ YKDAFFEKHG VKLGLMSGFI
301: KAAVSALQAQ PVVNAVIDGD DIIYRDYVDI SIAVGTSKGL VVPVIRGADQ MNFADIEKTI NSLAKKANEG TISIDEMAGG SFTVSNGGVY GSLISTPIIN
401: PPQSAILGMH SIVQRPMVVG GSVVPRPMMY VALTYDHRLI DGREAVYFLR RIKDVVEDPQ RLLLDI

Best Arabidopsis Sequence Match ( AT5G55070.1 )
(BLAST)

001: MMLRAVFRRA SIRGSSSASG LGKSLQSSRV AVSAQFHSVS ATETLVPRGN HAHSFHHRSC PGCPDCSRTI INGYQGTALQ RWVRPFSSDS GDVVEAVVPH
101: MGESITDGTL AAFLKKPGDR VEADEAIAQI ETDKVTIDIA SPASGVIQEF LVKEGDTVEP GNKVARISTS ADAVSHVAPS EKAPEKPAPK PSPPAEKPKV
201: ESTKVAEKPK APSPPPPPPS KQSAKEPQLP PKDRERRVPM TRLRKRVATR LKDSQNTFAL LTTFNEVDMT NLMKLRSQYK DAFLEKHGVK LGLMSGFIKA
301: AVSALQHQPV VNAVIDGDDI IYRDYVDISI AVGTSKGLVV PVIRDADKMN FADIEKTING LAKKATEGTI SIDEMAGGSF TVSNGGVYGS LISTPIINPP
401: QSAILGMHSI VQRPMVVGGS VVPRPMMYVA LTYDHRLIDG REAVYFLRRI KDVVEDPQRL LLDI

Arabidopsis Description

Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLQ4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.