CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040295.1-P	Field mustard	mitochondrion	100.0	100.0
CDX74077	Canola	mitochondrion, plastid	68.09	36.61
CDY08029	Canola	mitochondrion	66.93	35.46
CDY23198	Canola	mitochondrion	8.56	12.15
Zm00001d023606_P005	Maize	plastid	18.68	10.5
OQU78843	Sorghum	plastid	18.68	10.48
CDY39183	Canola	plastid	19.07	10.38
Os12t0182200-01	Rice	plastid	18.68	10.28
CDY04184	Canola	plastid	19.07	10.23
HORVU5Hr1G038090.3	Barley	plastid	17.12	10.21
CDY13593	Canola	plastid	18.68	10.06
CDX83563	Canola	plastid	18.29	9.87
TraesCS5B01G116300.1	Wheat	golgi, unclear	17.51	9.8
TraesCS5A01G119600.1	Wheat	plastid	16.73	9.43
Solyc11g017250.1.1	Tomato	plastid	17.12	9.4
TraesCS5D01G126000.1	Wheat	cytosol	14.79	9.31
PGSC0003DMT400023831	Potato	plastid	16.73	9.27
CDY03145	Canola	plastid	15.18	8.55
CDY12039	Canola	plastid	14.4	8.22
CDX82504	Canola	plastid	17.12	8.18
Zm00001d041839_P001	Maize	plastid	18.68	8.09
CDY24058	Canola	mitochondrion	17.12	7.93
CDY33075	Canola	mitochondrion, plastid	17.12	7.93
CDX75740	Canola	mitochondrion, plastid	17.12	7.84
CDX97529	Canola	mitochondrion	17.12	7.83
CDY55206	Canola	mitochondrion	14.4	7.23
CDY17300	Canola	mitochondrion	12.06	6.65
CDY19918	Canola	mitochondrion	11.67	6.47
CDY20790	Canola	mitochondrion	11.67	6.45
CDY06613	Canola	mitochondrion	11.67	6.44
CDX95323	Canola	mitochondrion	15.56	6.24
CDY31217	Canola	mitochondrion, plastid	11.67	6.24
CDY21016	Canola	mitochondrion, plastid	11.28	6.09
CDY23199	Canola	mitochondrion, plastid	15.95	5.95
CDY12012	Canola	plastid	12.06	5.94
CDY36727	Canola	plastid	12.06	5.79
CDX73652	Canola	mitochondrion	1.56	2.14
CDY69187	Canola	cytosol, nucleus	0.39	0.16
CDY17299	Canola	cytosol, plastid	0.39	0.15
TraesCS5D01G125900.1	Wheat	plastid	0.0	0.0

Protein Annotations

KEGG:00062+2.3.1.16	KEGG:00071+2.3.1.16	KEGG:00280+2.3.1.168	KEGG:00280+2.3.1.168+2.3.1.16	KEGG:00281+2.3.1.16	KEGG:00362+2.3.1.16
KEGG:00592+2.3.1.16	KEGG:00640+2.3.1.168	KEGG:00642+2.3.1.16	MapMan:35.1	Gene3D:4.10.320.10	GO:A0A078H8X1
UniProt:A0A078H8X1	InterPro:BCKADH_E2	EnsemblPlants:CDY34925	ProteinID:CDY34925	ProteinID:CDY34925.1	InterPro:E3-bd_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016746
EnsemblPlantsGene:GSBRNA2T00057501001	InterPro:IPR004167	InterPro:IPR036625	PFAM:PF02817	PFscan:PS51826	InterPro:PSBD
PANTHER:PTHR43178	PANTHER:PTHR43178:SF5	MetaCyc:PWY-5046	MetaCyc:PWY-5136	MetaCyc:PWY-6435	MetaCyc:PWY-6863
MetaCyc:PWY-6945	MetaCyc:PWY-6946	MetaCyc:PWY-6948	MetaCyc:PWY-7094	MetaCyc:PWY-7288	MetaCyc:PWY-7337
MetaCyc:PWY-7338	MetaCyc:PWY-7339	MetaCyc:PWY-7340	MetaCyc:PWY-735	MetaCyc:PWY-7606	MetaCyc:PWY-7654
MetaCyc:PWY-7726	SUPFAM:SSF47005	UniParc:UPI0002544AFA	:	:	:

Description

BnaA01g32560DBnaA01g32560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8X1]

Coordinates

chrLK032343:+:197303..198603

Molecular Weight (calculated)

27940.6 Da

IEP (calculated)

10.784

GRAVY (calculated)

-0.135

Length

257 amino acids

Sequence
(BLAST)

001: MTMIARRILR SHRFLRPFIS SSVCSPPFRA PEYHSQSVAS PFLVHSLSLM KWCGGGGSRS WFSNEAMAID SNAAGGFIDV PLGAGTNWGR EILWKSFRHS
101: VKFRAIKQFI EITSRFKGKV ALISHAPGDI IKVGETLVKL AVEDAQDALL VSSDSSKSKT DNLVGALSTP SVRNLAKDLG IDINAVTGSG KDGRVLKEDV
201: LRFGGQKGNI TDSVTRGDSV STTASNFEDQ IVPLRGFNRA MVKTMTMGHK STTFSFR

Best Arabidopsis Sequence Match ( AT3G06850.2 )
(BLAST)

001: MIARRIWRSH RFLRPFSSSS VCSPPFRVPE YLSQSSSSPA SRPFFVHPPT LMKWGGGSRS WFSNEAMATD SNSGLIDVPL AQTGEGIAEC ELLKWFVKEG
101: DSVEEFQPLC EVQSDKATIE ITSRFKGKVA LISHSPGDII KVGETLVRLA VEDSQDSLLT TDSSEIVTLG GSKQGTENLL GALSTPAVRN LAKDLGIDIN
201: VITGTGKDGR VLKEDVLRFS DQKGFVTDSV SSEHAVIGGD SVSTKASSNF EDKTVPLRGF SRAMVKTMTM ATSVPHFHFV EEINCDSLVE LKQFFKENNT
301: DSTIKHTFLP TLIKSLSMAL TKYPFVNSCF NAESLEIILK GSHNIGVAMA TEHGLVVPNI KNVQSLSLLE ITKELSRLQH LAANNKLNPE DVTGGTITLS
401: NIGAIGGKFG SPLLNLPEVA IIALGRIEKV PKFSKEGTVY PASIMMVNIA ADHRVLDGAT VARFCCQWKE YVEKPELLML QMR

Arabidopsis Description

BCE2Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Z1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.