CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92074	Soybean	cytosol, mitochondrion	44.38	75.45
TraesCS7B01G205500.1	Wheat	mitochondrion	60.96	25.79
TraesCS7A01G305100.1	Wheat	mitochondrion	60.96	25.79
CDX95323	Canola	mitochondrion	84.49	24.65
GSMUA_AchrUn_...	Banana	mitochondrion	63.1	23.84
Os06t0499900-01	Rice	mitochondrion	60.96	23.55
KXG37311	Sorghum	mitochondrion	60.96	23.55
Zm00001d034531_P001	Maize	mitochondrion	60.96	23.12
CDY23199	Canola	mitochondrion, plastid	83.96	22.79
HORVU7Hr1G072650.1	Barley	mitochondrion	62.57	22.33
TraesCS7D01G301900.1	Wheat	golgi	62.57	22.33
AT3G52200.2	Thale cress	mitochondrion	82.35	21.6
Bra006910.1-P	Field mustard	mitochondrion	80.21	20.55
VIT_13s0074g00150.t01	Wine grape	mitochondrion	66.84	19.65
Solyc11g007720.1.1	Tomato	nucleus, unclear	66.31	19.25
KRH34708	Soybean	mitochondrion	60.43	16.72
CDY23198	Canola	mitochondrion	14.44	14.92
CDY55206	Canola	mitochondrion	38.5	14.06
CDX83563	Canola	plastid	34.76	13.66
CDY13593	Canola	plastid	34.76	13.63
CDY39183	Canola	plastid	34.22	13.56
CDY12039	Canola	plastid	32.62	13.56
CDX82504	Canola	plastid	38.5	13.38
CDY03145	Canola	plastid	32.62	13.38
CDY04184	Canola	plastid	34.22	13.36
CDX97529	Canola	mitochondrion	39.57	13.17
CDY33075	Canola	mitochondrion, plastid	39.04	13.15
CDX75740	Canola	mitochondrion, plastid	39.04	13.01
CDY24058	Canola	mitochondrion	38.5	12.97
CDY21016	Canola	mitochondrion, plastid	32.09	12.61
CDY31217	Canola	mitochondrion, plastid	32.09	12.47
CDY20790	Canola	mitochondrion	31.02	12.47
CDY06613	Canola	mitochondrion	31.02	12.45
CDY17300	Canola	mitochondrion	31.02	12.45
CDY19918	Canola	mitochondrion	29.95	12.07
CDY12012	Canola	plastid	31.02	11.11
CDY36727	Canola	plastid	31.02	10.84
CDX74077	Canola	mitochondrion, plastid	26.74	10.46
CDY08029	Canola	mitochondrion	26.74	10.31
KRG92075	Soybean	mitochondrion	19.25	6.95
CDY34925	Canola	mitochondrion	2.14	1.56
CDY69187	Canola	cytosol, nucleus	1.6	0.48
CDY17299	Canola	cytosol, plastid	1.6	0.45

Protein Annotations

InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.2.1.2	Gene3D:3.30.559.10	GO:A0A078C9W9	InterPro:CAT-like_dom_sf	EnsemblPlants:CDX73652
ProteinID:CDX73652	ProteinID:CDX73652.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016746	EnsemblPlantsGene:GSBRNA2T00109232001	InterPro:IPR023213	PFAM:PF00198	PANTHER:PTHR23151
PANTHER:PTHR23151:SF9	SUPFAM:SSF52777	UniParc:UPI0004EF23B9	:	:	:

Description

BnaC08g23510D

Coordinates

chrLK031799:-:1966237..1968732

Molecular Weight (calculated)

20449.3 Da

IEP (calculated)

10.475

GRAVY (calculated)

0.093

Length

187 amino acids

Sequence
(BLAST)

001: MVLPLLRHAA IARTSSRSCL RLPHSKTMLM LSGMLRKEKL LCWRDVDISI AVATEKGLMT PIIRNADQKS IRGIHLFLTE LAQKARSGKL APHEFQGGTF
101: SISNLGMYPV DQFCAIINPP QAGILAVGRG NKVVEALIGA DGVEKPSVVT KMNVTLSADH RIFDGQVGAS FLAESRSNFE DVRRLLL

Best Arabidopsis Sequence Match ( AT3G52200.1 )
(BLAST)

001: MVLPLFRRAA IARTSSLLRA RLFAPASEFH SRFSNGLYHL DDKISSSNGV RSASIDLITR MDDSSPKPIL RFGVQNFSST GPISQTVLAM PALSPTMSHG
101: NVVKWMKKEG DKVEVGDVLC EIETDKATVE FESQEEGFLA KILVTEGSKD IPVNEPIAIM VEEEDDIKNV PATIEGGRDG KEETSAHQVM KPDESTQQKS
201: SIQPDASDLP PHVVLEMPAL SPTMNQGNIA KWWKKEGDKI EVGDVIGEIE TDKATLEFES LEEGYLAKIL IPEGSKDVAV GKPIALIVED AESIEAIKSS
301: SAGSSEVDTV KEVPDSVVDK PTERKAGFTK ISPAAKLLIL EHGLEASSIE ASGPYGTLLK SDVVAAIASG KASKSSASTK KKQPSKETPS KSSSTSKPSV
401: TQSDNNYEDF PNSQIRKIIA KRLLESKQKI PHLYLQSDVV LDPLLAFRKE LQENHGVKVS VNDIVIKAVA VALRNVRQAN AFWDAEKGDI VMCDSVDISI
501: AVATEKGLMT PIIKNADQKS ISAISLEVKE LAQKARSGKL APHEFQGGTF SISNLGMYPV DNFCAIINPP QAGILAVGRG NKVVEPVIGL DGIEKPSVVT
601: KMNVTLSADH RIFDGQVGAS FMSELRSNFE DVRRLLL

Arabidopsis Description

LTA3Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:F4J5T2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.