Factsheet for TraesCS7D01G301900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G305100.1	Wheat	mitochondrion	83.78	99.32
TraesCS7B01G205500.1	Wheat	mitochondrion	83.02	98.42
HORVU7Hr1G072650.1	Barley	mitochondrion	96.95	96.95
KXG37311	Sorghum	mitochondrion	74.05	80.17
Zm00001d034531_P001	Maize	mitochondrion	74.05	78.7
Os06t0499900-01	Rice	mitochondrion	72.33	78.31
KRG92074	Soybean	cytosol, mitochondrion	16.22	77.27
GSMUA_AchrUn_...	Banana	mitochondrion	59.73	63.23
CDX73652	Canola	mitochondrion	22.33	62.57
VIT_13s0074g00150.t01	Wine grape	mitochondrion	62.4	51.42
Solyc11g007720.1.1	Tomato	nucleus, unclear	58.21	47.36
CDX95323	Canola	mitochondrion	56.87	46.49
Bra033446.1-P	Field mustard	mitochondrion	56.87	46.49
KRH34708	Soybean	mitochondrion	56.11	43.49
CDY23199	Canola	mitochondrion, plastid	56.87	43.25
AT3G52200.2	Thale cress	mitochondrion	56.87	41.8
KRG92075	Soybean	mitochondrion	40.84	41.31
Bra006910.1-P	Field mustard	mitochondrion	51.15	36.71
TraesCS6D01G024400.1	Wheat	golgi, mitochondrion	36.64	35.42
TraesCS7D01G011600.1	Wheat	golgi, mitochondrion	35.69	34.57
TraesCS5D01G126000.1	Wheat	cytosol	22.71	29.17
TraesCS5D01G490000.1	Wheat	golgi, plastid, unclear	25.38	28.06
TraesCS4D01G070200.1	Wheat	mitochondrion	22.33	26.71
TraesCS2D01G039500.2	Wheat	mitochondrion	22.33	26.29
TraesCS5D01G212800.1	Wheat	plastid	23.09	26.13
TraesCS2D01G073400.1	Wheat	mitochondrion	20.04	20.67
TraesCS5D01G125900.1	Wheat	plastid	1.15	1.97

Protein Annotations

KEGG:00010+2.3.1.12	KEGG:00020+2.3.1.12	KEGG:00620+2.3.1.12	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.2.1.2
Gene3D:2.40.50.100	Gene3D:3.30.559.10	Gene3D:4.10.320.10	InterPro:Biotin_lipoyl	InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004742	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006090	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
GO:GO:0016746	GO:GO:0045254	InterPro:IPR000089	InterPro:IPR004167	InterPro:IPR023213	InterPro:IPR036625
InterPro:LAT1	PFAM:PF00198	PFAM:PF00364	PFAM:PF02817	ScanProsite:PS00189	PFscan:PS50968
PFscan:PS51826	InterPro:PSBD	PANTHER:PTHR23151	PANTHER:PTHR23151:SF9	SUPFAM:SSF47005	SUPFAM:SSF51230
SUPFAM:SSF52777	InterPro:Single_hybrid_motif	TIGRFAMs:TIGR01349	EnsemblPlantsGene:TraesCS7D01G301900	EnsemblPlants:TraesCS7D01G301900.1	TIGR:cd06849

Description

No Description!

Coordinates

chr7D:+:382115567..382121542

Molecular Weight (calculated)

56336.6 Da

IEP (calculated)

7.684

GRAVY (calculated)

-0.242

Length

524 amino acids

Sequence
(BLAST)

001: MLLRTRRCLP AALSRAAVHP RVSPALPSPG APRQHGPVAV ANQRSALEPR SGPIDWVRSS TMARANPATL FPASTGGHYR VGMQARWFSS AGLPPHMVIG
101: MPALSPTMNQ GNITKWRKQE GDKIEVGDVI CEIETDKATL EFETLEEGYL AKILVPEGSK DVQVGQPIYV TVEESDDIEK IPADTSFGGD HKEDESSGSA
201: AQTVEVDAAE QSPVMSRISP AAKMLIKEHG LNASLLKASG PRGTLLKGDV LAALKSGTAL SSAKEKTAPA APSPQPARDS QVHSQTTSPK SGTFEDITNT
301: QIRKVIAKRL LESKQTTPHL YLSKDVILDP LLAFRNELKE QHGVKVSVND IVIKAVALAL RNVPEANAYW DNLKEEAQKC DSVDISIAVA TEKGLMTPII
401: RNADQKTISA ISSEVKQLAE KARAGKLAPN EFQGGTFSIS NLGMYPVDHF CAIINPPQAG ILAVGRGNKV VEPVMDNDGT EKAAVVTKMM LTLSADHRIF
501: DGQVGGKFFT ELALNFSDIR RLLL

Best Arabidopsis Sequence Match ( AT3G52200.1 )
(BLAST)

001: MVLPLFRRAA IARTSSLLRA RLFAPASEFH SRFSNGLYHL DDKISSSNGV RSASIDLITR MDDSSPKPIL RFGVQNFSST GPISQTVLAM PALSPTMSHG
101: NVVKWMKKEG DKVEVGDVLC EIETDKATVE FESQEEGFLA KILVTEGSKD IPVNEPIAIM VEEEDDIKNV PATIEGGRDG KEETSAHQVM KPDESTQQKS
201: SIQPDASDLP PHVVLEMPAL SPTMNQGNIA KWWKKEGDKI EVGDVIGEIE TDKATLEFES LEEGYLAKIL IPEGSKDVAV GKPIALIVED AESIEAIKSS
301: SAGSSEVDTV KEVPDSVVDK PTERKAGFTK ISPAAKLLIL EHGLEASSIE ASGPYGTLLK SDVVAAIASG KASKSSASTK KKQPSKETPS KSSSTSKPSV
401: TQSDNNYEDF PNSQIRKIIA KRLLESKQKI PHLYLQSDVV LDPLLAFRKE LQENHGVKVS VNDIVIKAVA VALRNVRQAN AFWDAEKGDI VMCDSVDISI
501: AVATEKGLMT PIIKNADQKS ISAISLEVKE LAQKARSGKL APHEFQGGTF SISNLGMYPV DNFCAIINPP QAGILAVGRG NKVVEPVIGL DGIEKPSVVT
601: KMNVTLSADH RIFDGQVGAS FMSELRSNFE DVRRLLL

Arabidopsis Description

LTA3Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:F4J5T2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.