CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92075	Soybean	mitochondrion	71.75	93.63
KRG92074	Soybean	cytosol, mitochondrion	14.35	88.18
VIT_13s0074g00150.t01	Wine grape	mitochondrion	65.98	70.13
TraesCS7A01G305100.1	Wheat	mitochondrion	42.46	64.93
TraesCS7B01G205500.1	Wheat	mitochondrion	42.16	64.48
GSMUA_AchrUn_...	Banana	mitochondrion	46.6	63.64
Solyc11g007720.1.1	Tomato	nucleus, unclear	59.91	62.89
KXG37311	Sorghum	mitochondrion	44.67	62.4
Os06t0499900-01	Rice	mitochondrion	44.53	62.19
Zm00001d034531_P001	Maize	mitochondrion	44.23	60.65
CDX73652	Canola	mitochondrion	16.72	60.43
Bra033446.1-P	Field mustard	mitochondrion	56.66	59.75
CDX95323	Canola	mitochondrion	56.51	59.59
HORVU7Hr1G072650.1	Barley	mitochondrion	43.49	56.11
TraesCS7D01G301900.1	Wheat	golgi	43.49	56.11
CDY23199	Canola	mitochondrion, plastid	56.51	55.44
AT3G52200.2	Thale cress	mitochondrion	57.1	54.14
Bra006910.1-P	Field mustard	mitochondrion	50.89	47.12
KRH06095	Soybean	mitochondrion	29.73	36.75
KRH47526	Soybean	mitochondrion	29.59	36.56
KRH75381	Soybean	plastid	18.93	29.98
KRG91819	Soybean	endoplasmic reticulum, nucleus	20.12	29.25
KRH34962	Soybean	plastid	20.12	29.0
KRG90801	Soybean	endoplasmic reticulum, nucleus	19.82	26.48
KRH14369	Soybean	nucleus	18.05	26.29
KRH73773	Soybean	mitochondrion	17.75	25.86
KRH02272	Soybean	mitochondrion	17.01	22.33
KRH50815	Soybean	mitochondrion	16.42	21.55

Protein Annotations

EntrezGene:100780758	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.2.1.2	Gene3D:2.40.50.100	Gene3D:3.30.559.10
Gene3D:4.10.320.10	UniProt:A0A0R0I683	EMBL:ACUP02006617	EMBL:ACUP02006618	EMBL:ACUP02006619	InterPro:Biotin_lipoyl
InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf	EnsemblPlantsGene:GLYMA_10G201000	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	InterPro:IPR000089	InterPro:IPR004167	InterPro:IPR023213
InterPro:IPR036625	EnsemblPlants:KRH34708	ProteinID:KRH34708	ProteinID:KRH34708.1	PFAM:PF00198	PFAM:PF00364
PFAM:PF02817	ScanProsite:PS00189	PFscan:PS50968	PFscan:PS51826	InterPro:PSBD	PANTHER:PTHR23151
PANTHER:PTHR23151:SF9	SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777	InterPro:Single_hybrid_motif	UniParc:UPI0006EDDBCE
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:43202432..43217236

Molecular Weight (calculated)

73291.5 Da

IEP (calculated)

6.847

GRAVY (calculated)

-0.267

Length

676 amino acids

Sequence
(BLAST)

001: MALSRLRHPL FSRSLRILSS PARSLSRTSN SSIFTLGGDH HNIIRPAFCS RLTGIHDRSL KSKWTDVKYF SSSDSSHEVL GMPALSPTMT QGNIAKWRKK
101: EGEKIEVGDV LCEIETDKAT LEFESLEEGF LAKILVPEGS KDVPVGQPIA ITVEDENDIQ NVPASVGGET GVEEKKPTLG GVSDERKSES TSSVVNASEL
201: PPHLLLEMPA LSPTMNQGNI AKWRKQEGDK IEVGDILCEI ETDKATLEFE SLEEGYLAKI LAPEGSKEVA VGHSIAITVE DASDIEAIKN SVSSSTNQQK
301: APQRGTKSEV KAQKNNITRI SPAAKLLIAE YGLDAPTLNA TGPYGTLLKG DVLSAIKSGK LSPKPASSKE KALSSQSHQQ VAASQESKSD LKKSDAYEDF
401: PNSQIRKVIA KRLLDSKQNT PHLYLSSDVI LDPLLSLRKG LKEQYDVKVS VNDIIIKVVA AALRNVPEAN AYWNVEKDEV ILNDSIDISI AVATEKGLMT
501: PIIKNADQKT ISAISSEVKE LAAKARAGKL KPHEFQGGTF SISNLGMFPV DKFCAIINPP QACILAVGRG NKVVEPVIGT DGIEKPSIAT KLSLTLSADH
601: RVFDGKVGAY LSSDLSDGMI WHNGTLGSMF IYKSGLALSP QHFIFNFCTR IWPSGWTNNG KFGQISSSMS MLDWIR

Best Arabidopsis Sequence Match ( AT3G52200.1 )
(BLAST)

001: MVLPLFRRAA IARTSSLLRA RLFAPASEFH SRFSNGLYHL DDKISSSNGV RSASIDLITR MDDSSPKPIL RFGVQNFSST GPISQTVLAM PALSPTMSHG
101: NVVKWMKKEG DKVEVGDVLC EIETDKATVE FESQEEGFLA KILVTEGSKD IPVNEPIAIM VEEEDDIKNV PATIEGGRDG KEETSAHQVM KPDESTQQKS
201: SIQPDASDLP PHVVLEMPAL SPTMNQGNIA KWWKKEGDKI EVGDVIGEIE TDKATLEFES LEEGYLAKIL IPEGSKDVAV GKPIALIVED AESIEAIKSS
301: SAGSSEVDTV KEVPDSVVDK PTERKAGFTK ISPAAKLLIL EHGLEASSIE ASGPYGTLLK SDVVAAIASG KASKSSASTK KKQPSKETPS KSSSTSKPSV
401: TQSDNNYEDF PNSQIRKIIA KRLLESKQKI PHLYLQSDVV LDPLLAFRKE LQENHGVKVS VNDIVIKAVA VALRNVRQAN AFWDAEKGDI VMCDSVDISI
501: AVATEKGLMT PIIKNADQKS ISAISLEVKE LAQKARSGKL APHEFQGGTF SISNLGMYPV DNFCAIINPP QAGILAVGRG NKVVEPVIGL DGIEKPSVVT
601: KMNVTLSADH RIFDGQVGAS FMSELRSNFE DVRRLLL

Arabidopsis Description

LTA3Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:F4J5T2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.