Factsheet for Bra006910.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033446.1-P	Field mustard	mitochondrion	72.19	82.22
CDX73652	Canola	mitochondrion	20.55	80.21
KRG92074	Soybean	cytosol, mitochondrion	11.23	74.55
AT3G52200.2	Thale cress	mitochondrion	69.04	70.69
TraesCS7A01G305100.1	Wheat	mitochondrion	35.62	58.82
TraesCS7B01G205500.1	Wheat	mitochondrion	35.34	58.37
VIT_13s0074g00150.t01	Wine grape	mitochondrion	50.55	58.02
Os06t0499900-01	Rice	mitochondrion	36.03	54.34
GSMUA_AchrUn_...	Banana	mitochondrion	36.71	54.14
Solyc11g007720.1.1	Tomato	nucleus, unclear	47.26	53.57
KXG37311	Sorghum	mitochondrion	35.48	53.51
Zm00001d034531_P001	Maize	mitochondrion	35.75	52.94
KRG92075	Soybean	mitochondrion	36.99	52.12
HORVU7Hr1G072650.1	Barley	mitochondrion	36.71	51.15
TraesCS7D01G301900.1	Wheat	golgi	36.71	51.15
KRH34708	Soybean	mitochondrion	47.12	50.89
Bra001531.1-P	Field mustard	mitochondrion, plastid	23.42	36.7
Bra027386.1-P	Field mustard	mitochondrion	23.01	33.6
Bra037976.1-P	Field mustard	mitochondrion	24.38	32.9
Bra028057.1-P	Field mustard	plastid	15.75	25.27
Bra025167.1-P	Field mustard	plastid	16.3	24.95
Bra017345.1-P	Field mustard	plastid	16.3	24.84
Bra035551.1-P	Field mustard	mitochondrion	14.66	24.6
Bra002934.1-P	Field mustard	mitochondrion	15.07	23.61
Bra016809.1-P	Field mustard	mitochondrion, plastid	14.93	22.95
Bra028992.1-P	Field mustard	mitochondrion	14.93	22.06
Bra001220.1-P	Field mustard	mitochondrion	13.15	19.43
Bra040295.1-P	Field mustard	mitochondrion	4.66	13.23

Protein Annotations

InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	Gene3D:2.40.50.100	Gene3D:3.30.559.10	Gene3D:4.10.320.10	MapMan:50.2.3
InterPro:Biotin_lipoyl	EnsemblPlantsGene:Bra006910	EnsemblPlants:Bra006910.1	EnsemblPlants:Bra006910.1-P	InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016746
InterPro:IPR000089	InterPro:IPR004167	InterPro:IPR023213	InterPro:IPR036625	UniProt:M4CRR8	PFAM:PF00198
PFAM:PF00364	PFAM:PF02817	ScanProsite:PS00189	PFscan:PS50968	PFscan:PS51826	InterPro:PSBD
PANTHER:PTHR23151	PANTHER:PTHR23151:SF9	SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777	InterPro:Single_hybrid_motif
UniParc:UPI0002542E22	SEG:seg	:	:	:	:

Description

AT3G52200 (E=3e-174) LTA3 | LTA3; ATP binding / dihydrolipoyllysine-residue acetyltransferase

Coordinates

chrA09:+:26104078..26111907

Molecular Weight (calculated)

79960.2 Da

IEP (calculated)

6.762

GRAVY (calculated)

-0.319

Length

730 amino acids

Sequence
(BLAST)

001: MVLPLLRHAA IARSRTSSLL RARLLAPASG FHTRFSNGLY CLDDKFSSST GVRYVFYSTN LGSTPQMVLT MPALSPTMVE VGDVLCEIET DKATVELESQ
101: EEGYLAKVLV TEGSKDIPGN APIAIMEEDD IQNVSAPGED GRVGKEETSA RQEMKPEEST QQKGSIQTDT SDLPPHVVFE MPALSPTMNQ GNIAKWWKKE
201: GDKIEVGDVI GEIETDKATL EFDSLEEGYL AKILVPEGSK DVAVGKPIAL IISPFSSEVE DAESIEVIKS SSAGGSEVET EKQPPQSDVD KSGGKKAGFT
301: KISPAAKLLI LEHGLEASSI KASGPYGKLL KSDVVAAIAS GKTAKRSVST EKKQPSKDNL SKSSSISRPE SKSSATLSDD YEDFPNIQIR KIIAKRLLES
401: KQKIPHLYLS SDVVLDPLLA FRKELHENHD VKVSVNDIVI KAVAVALRNV RQANAFWDTE KGEIVMLEDV DISIAVATEK TRSDEGNTVR TERRRRRRHV
501: SRRRRIETRE DERSWWVSIL LLKEMTRADG GDTVWSARVI VLGGGFPSVV GFDQWWVSIS GGFRSFLSDG EDDQTQRRRR IGGGGSVAGF IVHRFSPSFV
601: TKSTRRTNAD QKSISVISLE VKELAQKARS GKLAPHEFQG GTFSISNLRM YHVDQLCAII NPPQAGILAV GRGNKVVEAV IGADGVEKPS VVTKMNVTLS
701: ADYRIFDGQV GALFLAELRS NFEYVRRLLL

Best Arabidopsis Sequence Match ( AT3G52200.1 )
(BLAST)

001: MVLPLFRRAA IARTSSLLRA RLFAPASEFH SRFSNGLYHL DDKISSSNGV RSASIDLITR MDDSSPKPIL RFGVQNFSST GPISQTVLAM PALSPTMSHG
101: NVVKWMKKEG DKVEVGDVLC EIETDKATVE FESQEEGFLA KILVTEGSKD IPVNEPIAIM VEEEDDIKNV PATIEGGRDG KEETSAHQVM KPDESTQQKS
201: SIQPDASDLP PHVVLEMPAL SPTMNQGNIA KWWKKEGDKI EVGDVIGEIE TDKATLEFES LEEGYLAKIL IPEGSKDVAV GKPIALIVED AESIEAIKSS
301: SAGSSEVDTV KEVPDSVVDK PTERKAGFTK ISPAAKLLIL EHGLEASSIE ASGPYGTLLK SDVVAAIASG KASKSSASTK KKQPSKETPS KSSSTSKPSV
401: TQSDNNYEDF PNSQIRKIIA KRLLESKQKI PHLYLQSDVV LDPLLAFRKE LQENHGVKVS VNDIVIKAVA VALRNVRQAN AFWDAEKGDI VMCDSVDISI
501: AVATEKGLMT PIIKNADQKS ISAISLEVKE LAQKARSGKL APHEFQGGTF SISNLGMYPV DNFCAIINPP QAGILAVGRG NKVVEPVIGL DGIEKPSVVT
601: KMNVTLSADH RIFDGQVGAS FMSELRSNFE DVRRLLL

Arabidopsis Description

LTA3Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:F4J5T2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.