Factsheet for Bra035551.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20790	Canola	mitochondrion	98.62	92.26
CDY06613	Canola	mitochondrion	98.62	92.06
Bra002934.1-P	Field mustard	mitochondrion	95.86	89.48
AT5G55070.1	Thale cress	mitochondrion	92.64	86.85
Bra028992.1-P	Field mustard	mitochondrion	94.25	83.0
Solyc12g005080.1.1	Tomato	nucleus	67.13	78.92
Solyc07g064800.2.1	Tomato	extracellular, nucleus	74.71	69.44
VIT_19s0090g00750.t01	Wine grape	cytosol	62.3	69.13
PGSC0003DMT400071652	Potato	mitochondrion	74.48	68.79
PGSC0003DMT400057449	Potato	mitochondrion	73.79	68.59
Os02t0514700-00	Rice	mitochondrion	62.3	68.09
Os04t0394200-01	Rice	mitochondrion	68.51	67.73
VIT_10s0116g01480.t01	Wine grape	mitochondrion	73.33	67.44
TraesCS4B01G071300.1	Wheat	mitochondrion	67.82	67.35
TraesCS4D01G070200.1	Wheat	mitochondrion	67.82	67.35
GSMUA_AchrUn_...	Banana	mitochondrion	69.89	67.26
TraesCS4A01G243500.1	Wheat	golgi, mitochondrion, unclear	67.59	67.12
GSMUA_Achr3P18670_001	Banana	mitochondrion	69.66	67.04
KRH14369	Soybean	nucleus	71.26	66.81
KRH73773	Soybean	mitochondrion	70.8	66.38
TraesCS2D01G039500.2	Wheat	mitochondrion	67.59	66.07
TraesCS2A01G041100.1	Wheat	golgi, nucleus, unclear	67.36	65.84
Zm00001d025258_P009	Maize	mitochondrion	67.36	65.7
TraesCS2B01G053600.1	Wheat	mitochondrion	64.14	65.34
Bra016809.1-P	Field mustard	mitochondrion, plastid	70.34	64.42
OQU93042	Sorghum	mitochondrion	68.28	63.6
Zm00001d003923_P002	Maize	mitochondrion	67.13	61.73
HORVU4Hr1G011850.1	Barley	mitochondrion, plastid	67.36	61.55
GSMUA_Achr9P01190_001	Banana	cytosol	70.11	61.37
Bra001531.1-P	Field mustard	mitochondrion, plastid	25.52	23.82
Bra027386.1-P	Field mustard	mitochondrion	26.44	23.0
Bra037976.1-P	Field mustard	mitochondrion	27.13	21.81
Bra017345.1-P	Field mustard	plastid	21.15	19.21
Bra028057.1-P	Field mustard	plastid	20.0	19.12
Bra025167.1-P	Field mustard	plastid	20.92	19.08
Bra033446.1-P	Field mustard	mitochondrion	27.59	18.72
Bra001220.1-P	Field mustard	mitochondrion	20.46	18.02
Os01t0314100-01	Rice	mitochondrion	20.23	16.83
Bra006910.1-P	Field mustard	mitochondrion	24.6	14.66
Bra040295.1-P	Field mustard	mitochondrion	5.98	10.12
Os01t0314000-01	Rice	cytosol	0.92	0.75

Protein Annotations

KEGG:00020+2.3.1.61	KEGG:00310+2.3.1.61	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.3.4.2	Gene3D:2.40.50.100
Gene3D:3.30.559.10	InterPro:Biotin_lipoyl	EnsemblPlantsGene:Bra035551	EnsemblPlants:Bra035551.1	EnsemblPlants:Bra035551.1-P	InterPro:CAT-like_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004149	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016740	GO:GO:0016746	GO:GO:0045252	InterPro:IPR000089	InterPro:IPR023213	UniProt:M4F3A1
PFAM:PF00198	PFAM:PF00364	ScanProsite:PS00189	PFscan:PS50968	PANTHER:PTHR43416	PANTHER:PTHR43416:SF5
SUPFAM:SSF51230	SUPFAM:SSF52777	InterPro:Single_hybrid_motif	InterPro:SucB	TIGRFAMs:TIGR01347	UniParc:UPI0002546673
SEG:seg	:	:	:	:	:

Description

AT5G55070 (E=2e-185) | 2-oxoacid dehydrogenase family protein

Coordinates

chrA02:-:7577192..7580008

Molecular Weight (calculated)

46653.2 Da

IEP (calculated)

9.581

GRAVY (calculated)

-0.192

Length

435 amino acids

Sequence
(BLAST)

001: MMLRAVIRRA STRGGGSSAS GLGKSLQSSR VAASTQSFHS LSATQTLVPR GTDARSFHHR SCPGDVVEAV VPHMGESITD GTLANFLKKP GDRVEADEAI
101: AQIETDKVTI DIASPASGVI QEFLVKEGDT VEPGNKVAII STSADAVSHV APSEKVAEKP AAKPSPPTEA PKVESTKVAE KPKAPSPPPP TKQSAKEPQL
201: PPKDRERRVP MTRLRKRVAT RLKDSQNTFA LLTTFNEVDM TNLMKLRSQY KDAFFEKHGV KLGLMSGFIK AAVSALQAQP VVNAVIDGDD IIYRDYVDIS
301: IAVGTSKGLV VPVIRGADQM NCADIEKTIN SLAKKANEGA ISIDEMAGGS FTVSNGGVYG SLISTPIINP PQSAILGMHS IVQRPMVVGG SVVPRPMMYV
401: ALTYDHRLID GREAVYFLRR IKDVVEDPQR LLLDI

Best Arabidopsis Sequence Match ( AT5G55070.1 )
(BLAST)

001: MMLRAVFRRA SIRGSSSASG LGKSLQSSRV AVSAQFHSVS ATETLVPRGN HAHSFHHRSC PGCPDCSRTI INGYQGTALQ RWVRPFSSDS GDVVEAVVPH
101: MGESITDGTL AAFLKKPGDR VEADEAIAQI ETDKVTIDIA SPASGVIQEF LVKEGDTVEP GNKVARISTS ADAVSHVAPS EKAPEKPAPK PSPPAEKPKV
201: ESTKVAEKPK APSPPPPPPS KQSAKEPQLP PKDRERRVPM TRLRKRVATR LKDSQNTFAL LTTFNEVDMT NLMKLRSQYK DAFLEKHGVK LGLMSGFIKA
301: AVSALQHQPV VNAVIDGDDI IYRDYVDISI AVGTSKGLVV PVIRDADKMN FADIEKTING LAKKATEGTI SIDEMAGGSF TVSNGGVYGS LISTPIINPP
401: QSAILGMHSI VQRPMVVGGS VVPRPMMYVA LTYDHRLIDG REAVYFLRRI KDVVEDPQRL LLDI

Arabidopsis Description

Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLQ4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.