Factsheet for Bra017345.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra026521.1-P
Bra028057.1-P
Bra035089.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G25860.1	Bra028057.1-P	AT1G34430.1	21798944
AT3G25860.1	Bra035089.1-P	AT1G79070.1	21798944
AT3G25860.1	Bra026521.1-P	AT3G25545.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04184	Canola	plastid	98.96	98.96
CDY39183	Canola	plastid	97.29	98.73
Bra025167.1-P	Field mustard	plastid	93.53	93.92
AT3G25860.1	Thale cress	plastid	91.86	91.67
GSMUA_Achr3P07350_001	Banana	cytosol	64.51	75.92
VIT_01s0011g03380.t01	Wine grape	plastid	76.2	74.8
Solyc05g009530.2.1	Tomato	plastid	71.19	74.29
PGSC0003DMT400033754	Potato	plastid	69.94	72.83
KRH75381	Soybean	plastid	64.51	72.37
KRG90801	Soybean	endoplasmic reticulum, nucleus	73.28	69.37
HORVU5Hr1G061140.1	Barley	plastid	65.34	67.6
TraesCS5D01G212800.1	Wheat	plastid	65.14	67.39
TraesCS3B01G372900.1	Wheat	plastid	63.67	67.18
TraesCS5B01G489600.1	Wheat	golgi	66.6	67.16
TraesCS5A01G476700.1	Wheat	plastid	66.39	67.09
Os08t0431300-01	Rice	plastid	66.39	66.95
Zm00001d032224_P001	Maize	plastid	65.55	66.67
TraesCS5D01G490000.1	Wheat	golgi, plastid, unclear	65.76	66.46
EES15031	Sorghum	plastid	65.76	66.32
TraesCS5B01G204800.1	Wheat	plastid	64.09	66.31
OQU89472	Sorghum	plastid	62.63	65.36
Zm00001d020426_P001	Maize	plastid	61.17	64.54
Bra028057.1-P	Field mustard	plastid	59.92	63.08
Os09t0408600-01	Rice	plastid	64.93	62.08
TraesCS5A01G206600.2	Wheat	plastid	58.04	59.91
Zm00001d050383_P001	Maize	plastid	64.72	59.39
HORVU5Hr1G112850.3	Barley	plastid	63.88	57.09
Bra001531.1-P	Field mustard	mitochondrion, plastid	28.39	29.18
Bra027386.1-P	Field mustard	mitochondrion	29.65	28.4
Bra037976.1-P	Field mustard	mitochondrion	31.52	27.91
Bra001220.1-P	Field mustard	mitochondrion	23.8	23.08
Bra035551.1-P	Field mustard	mitochondrion	19.21	21.15
Bra033446.1-P	Field mustard	mitochondrion	28.18	21.06
Bra002934.1-P	Field mustard	mitochondrion	19.62	20.17
Bra028992.1-P	Field mustard	mitochondrion	20.25	19.64
Bra016809.1-P	Field mustard	mitochondrion, plastid	19.0	19.16
Bra040295.1-P	Field mustard	mitochondrion	10.23	19.07
Bra006910.1-P	Field mustard	mitochondrion	24.84	16.3

Protein Annotations

InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	Gene3D:2.40.50.100	Gene3D:3.30.559.10	Gene3D:4.10.320.10	MapMan:5.1.2.2.2
InterPro:Biotin_lipoyl	EnsemblPlantsGene:Bra017345	EnsemblPlants:Bra017345.1	EnsemblPlants:Bra017345.1-P	InterPro:CAT-like_dom_sf	ncoils:Coil
InterPro:E3-bd_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740
GO:GO:0016746	InterPro:IPR000089	InterPro:IPR004167	InterPro:IPR023213	InterPro:IPR036625	UniProt:M4DLG4
PFAM:PF00198	PFAM:PF00364	PFAM:PF02817	ScanProsite:PS00189	PFscan:PS50968	PFscan:PS51826
InterPro:PSBD	PANTHER:PTHR23151	PANTHER:PTHR23151:SF75	SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777
InterPro:Single_hybrid_motif	UniParc:UPI00025421D0	SEG:seg	:	:	:

Description

AT3G25860 (E=8e-180) LTA2, PLE2 | LTA2; dihydrolipoyllysine-residue acetyltransferase

Coordinates

chrA09:-:14415713..14417597

Molecular Weight (calculated)

49755.7 Da

IEP (calculated)

9.502

GRAVY (calculated)

0.016

Length

479 amino acids

Sequence
(BLAST)

001: MAASSSFLST ASLSNPKSTI SFASSVSPAP IPSLRRVVFR SPSSHRRVMT VRSKIREIFM PALSSTMTEG KIVSWIKTEG EKLAKGESVV VVESDKADMD
101: VETFYDGYLA AIVVGEGETA PVGAAIGLLA ETEAEIEEAK NKAASKPSSS AVVPSPPPAT SSPAPAIAQP SPAAAASDGP RKTVATPHAK KLAKQHKVDI
201: GSVAGTGPFG RITASDVEAA AGIAPTVTPP PPPPPPAAAP TPTAKATTTS SPPLLPDASI VPFTAMQSAV SKNMIESLSV PTFRVGYPVN TDALDALYEK
301: VKPKGVTMTA LLAKAAGMAL AQHPVVNASC KDGKSFSYNS NINVAVAVAI NGGLITPVLQ DADKLDLYLL SQKWKELVGK ARNKQLQPHE YNSGTFTLSN
401: LGMFGVDRFD AILPPGQGAI MAVGASKPTV VADKDGFFSV KNKMLVNVTA DHRIVYGADL AAFLQTFAKI VENPDSLTL

Best Arabidopsis Sequence Match ( AT3G25860.1 )
(BLAST)

001: MAVSSSSFLS TASLTNSKSN ISFASSVSPS LRSVVFRSTT PATSHRRSMT VRSKIREIFM PALSSTMTEG KIVSWIKTEG EKLAKGESVV VVESDKADMD
101: VETFYDGYLA AIVVGEGETA PVGAAIGLLA ETEAEIEEAK SKAASKSSSS VAEAVVPSPP PVTSSPAPAI AQPAPVTAVS DGPRKTVATP YAKKLAKQHK
201: VDIESVAGTG PFGRITASDV ETAAGIAPSK SSIAPPPPPP PPVTAKATTT NLPPLLPDSS IVPFTAMQSA VSKNMIESLS VPTFRVGYPV NTDALDALYE
301: KVKPKGVTMT ALLAKAAGMA LAQHPVVNAS CKDGKSFSYN SSINIAVAVA INGGLITPVL QDADKLDLYL LSQKWKELVG KARSKQLQPH EYNSGTFTLS
401: NLGMFGVDRF DAILPPGQGA IMAVGASKPT VVADKDGFFS VKNTMLVNVT ADHRIVYGAD LAAFLQTFAK IIENPDSLTL

Arabidopsis Description

LTA2Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SQI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.