Factsheet for Os08t0431300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plastid: 17189339
nucleus: 19621931
plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0219000-00
Os08t0129900-00
Os12t0182200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G25860.1	Os12t0182200-01	AT1G34430.1	21798944
AT3G25860.1	Os08t0129900-00	AT1G79070.1	21798944
AT3G25860.1	Os01t0219000-00	AT3G25545.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15031	Sorghum	plastid	85.89	85.89
Zm00001d032224_P001	Maize	plastid	84.0	84.71
TraesCS5B01G489600.1	Wheat	golgi	84.42	84.42
TraesCS5A01G476700.1	Wheat	plastid	84.21	84.39
TraesCS5D01G490000.1	Wheat	golgi, plastid, unclear	83.79	83.97
GSMUA_Achr3P07350_001	Banana	cytosol	66.11	77.15
Zm00001d050383_P001	Maize	plastid	84.63	77.01
HORVU5Hr1G112850.3	Barley	plastid	80.63	71.46
CDX83563	Canola	plastid	68.0	67.86
VIT_01s0011g03380.t01	Wine grape	plastid	69.68	67.83
Solyc05g009530.2.1	Tomato	plastid	65.47	67.76
Os09t0408600-01	Rice	plastid	71.37	67.66
CDY13593	Canola	plastid	67.58	67.3
Bra025167.1-P	Field mustard	plastid	67.58	67.3
PGSC0003DMT400033754	Potato	plastid	64.63	66.74
AT3G25860.1	Thale cress	plastid	67.37	66.67
Bra017345.1-P	Field mustard	plastid	66.95	66.39
CDY39183	Canola	plastid	65.89	66.31
KRH75381	Soybean	plastid	59.58	66.28
CDY04184	Canola	plastid	66.74	66.18
Os12t0182200-01	Rice	plastid	65.05	66.17
KRG90801	Soybean	endoplasmic reticulum, nucleus	68.0	63.83
Os02t0105200-01	Rice	mitochondrion	30.74	26.64
Os07t0410100-01	Rice	mitochondrion	29.47	25.88
Os06t0499900-01	Rice	mitochondrion	26.32	25.83
Os06t0105400-02	Rice	mitochondrion	29.05	25.09
Os02t0514700-00	Rice	mitochondrion	17.89	21.36
Os04t0394200-01	Rice	mitochondrion	19.37	20.91
Os01t0314100-01	Rice	mitochondrion	21.89	19.89
Os01t0314000-01	Rice	cytosol	0.63	0.57

Protein Annotations

InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	Gene3D:2.40.50.100	Gene3D:3.30.559.10	Gene3D:4.10.320.10	EntrezGene:4345640
MapMan:5.1.2.2.2	ProteinID:BAC99341.1	ProteinID:BAD01179.1	ProteinID:BAF23776.1	ProteinID:BAT05556.1	InterPro:Biotin_lipoyl
InterPro:CAT-like_dom_sf	ncoils:Coil	InterPro:E3-bd_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	InterPro:IPR000089	InterPro:IPR004167	InterPro:IPR023213
InterPro:IPR036625	EnsemblPlantsGene:Os08g0431300	EnsemblPlants:Os08t0431300-01	PFAM:PF00198	PFAM:PF00364	PFAM:PF02817
ScanProsite:PS00189	PFscan:PS50968	PFscan:PS51826	InterPro:PSBD	PANTHER:PTHR23151	PANTHER:PTHR23151:SF67
UniProt:Q6ZKB1	SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777	InterPro:Single_hybrid_motif	UniParc:UPI00001D8CA6
RefSeq:XP_015650015.1	SEG:seg	:	:	:	:

Description

Similar to Dihydrolipoamide S-acetyltransferase. (Os08t0431300-01)

Coordinates

chr8:-:20858831..20862257

Molecular Weight (calculated)

48835.2 Da

IEP (calculated)

8.860

GRAVY (calculated)

0.168

Length

475 amino acids

Sequence
(BLAST)

001: MATTPAPVSL SAAASTVPAR LLVGRGAAAA PVARRRARMV VVRAKIREIF MPALSSTMTE GKIVSWSAAE GDRVAKGDAV VVVESDKADM DVETFHDGIV
101: AAVLVPAGES APVGAPIALL AESEDDLQAA LAKAQELSKA HPQQAPPPSD AAAPPPPPPP PAAAPAAPAP VAAGTKGIAT PQAKKLAKQH RVDLAKVAGT
201: GPFGRITPAD VEAAAGIEPK PKVVPAASAA PVPLSAPAIG AVPQAAELPP VPGATVVPFT GMQAAVSKNM VESLAVPAFR VGYPIVTDKL DELYEKVKSK
301: GVTMTVLLAK AAAMALAQHP VVNASCRDGK SFTYNTNINI AVAVAIDGGL ITPVLEDADK LDIYLLSQKW KELVKKARAK QLQPNEYSSG TFTLSNLGMF
401: GVDRFDAILP PGQGGIMAVG ASKPTVVADK DGFFSVKSKM LVNVTADHRI VYGADLAAFL QTFAKIIEDP ESLTL

Best Arabidopsis Sequence Match ( AT3G25860.1 )
(BLAST)

001: MAVSSSSFLS TASLTNSKSN ISFASSVSPS LRSVVFRSTT PATSHRRSMT VRSKIREIFM PALSSTMTEG KIVSWIKTEG EKLAKGESVV VVESDKADMD
101: VETFYDGYLA AIVVGEGETA PVGAAIGLLA ETEAEIEEAK SKAASKSSSS VAEAVVPSPP PVTSSPAPAI AQPAPVTAVS DGPRKTVATP YAKKLAKQHK
201: VDIESVAGTG PFGRITASDV ETAAGIAPSK SSIAPPPPPP PPVTAKATTT NLPPLLPDSS IVPFTAMQSA VSKNMIESLS VPTFRVGYPV NTDALDALYE
301: KVKPKGVTMT ALLAKAAGMA LAQHPVVNAS CKDGKSFSYN SSINIAVAVA INGGLITPVL QDADKLDLYL LSQKWKELVG KARSKQLQPH EYNSGTFTLS
401: NLGMFGVDRF DAILPPGQGA IMAVGASKPT VVADKDGFFS VKNTMLVNVT ADHRIVYGAD LAAFLQTFAK IIENPDSLTL

Arabidopsis Description

LTA2Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SQI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.