Factsheet for Os07t0410100-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 8

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
mitochondrion: 23027867
extracellular: 25047395
plasma membrane: 27800704

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0105200-01	mitochondrion, mitochondrion, mitochondrion
Os06t0105400-02	mitochondrion, mitochondrion, mitochondrion
Os07t0410100-01	mitochondrion, mitochondrion, mitochondrion

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54220.1	Os02t0105200-01	AT1G54220.1	24846799
AT1G54220.1	Os06t0105400-02	AT1G54220.1	24846799
AT1G54220.1	Os07t0410100-01	AT1G54220.1	24846799
AT1G54220.1	Os02t0105200-01	AT3G13930.1	24846799
AT1G54220.1	Os06t0105400-02	AT3G13930.1	24846799
AT1G54220.1	Os07t0410100-01	AT3G13930.1	24846799
AT3G13930.1	Os02t0105200-01	AT3G13930.1	24846799
AT3G13930.1	Os06t0105400-02	AT3G13930.1	24846799
AT3G13930.1	Os07t0410100-01	AT3G13930.1	24846799

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0105200-01	Rice	mitochondrion	90.02	88.87
TraesCS6D01G024400.1	Wheat	golgi, mitochondrion	85.58	85.42
TraesCS6B01G028600.1	Wheat	mitochondrion	83.18	84.59
HORVU6Hr1G003770.1	Barley	cytosol, mitochondrion	83.36	84.46
TraesCS6A01G022600.2	Wheat	golgi	83.36	83.83
EES04754	Sorghum	mitochondrion	82.99	83.3
Zm00001d053580_P002	Maize	mitochondrion	82.44	80.94
Os06t0105400-02	Rice	mitochondrion	75.79	74.55
Zm00001d016365_P002	Maize	mitochondrion	81.15	71.15
Solyc07g006790.2.1	Tomato	plastid	64.33	62.93
KRH47526	Soybean	mitochondrion	63.4	62.71
KRH06095	Soybean	mitochondrion	63.03	62.34
VIT_09s0002g01800.t01	Wine grape	mitochondrion	63.77	62.16
PGSC0003DMT400048225	Potato	mitochondrion	63.22	61.96
VIT_11s0016g01870.t01	Wine grape	mitochondrion	62.48	61.79
AT3G13930.1	Thale cress	mitochondrion	60.63	60.85
Bra001531.1-P	Field mustard	mitochondrion, plastid	51.94	60.3
AT1G54220.1	Thale cress	mitochondrion	60.07	60.3
Bra027386.1-P	Field mustard	mitochondrion	55.64	60.2
Bra037976.1-P	Field mustard	mitochondrion	59.89	59.89
CDX82504	Canola	plastid	59.52	59.85
CDY55206	Canola	mitochondrion	56.01	59.18
CDX97529	Canola	mitochondrion	61.18	58.9
CDY33075	Canola	mitochondrion, plastid	60.26	58.74
CDX75740	Canola	mitochondrion, plastid	60.63	58.47
CDY24058	Canola	mitochondrion	59.89	58.38
GSMUA_Achr10P...	Banana	mitochondrion, vacuole	67.28	57.32
Os06t0499900-01	Rice	mitochondrion	34.2	38.22
Os04t0394200-01	Rice	mitochondrion	24.21	29.77
Os12t0182200-01	Rice	plastid	25.51	29.55
Os08t0431300-01	Rice	plastid	25.88	29.47
Os02t0514700-00	Rice	mitochondrion	20.52	27.89
Os09t0408600-01	Rice	plastid	24.95	26.95
Os01t0314100-01	Rice	mitochondrion	22.92	23.71
Os01t0314000-01	Rice	cytosol	0.92	0.94

Protein Annotations

KEGG:00010+2.3.1.12	KEGG:00020+2.3.1.12	KEGG:00620+2.3.1.12	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.2.1.2
Gene3D:2.40.50.100	Gene3D:3.30.559.10	Gene3D:4.10.320.10	EntrezGene:4343003	EMBL:AK070846	ProteinID:BAC81178.1
ProteinID:BAD31326.1	ProteinID:BAF21359.1	ProteinID:BAT01122.1	InterPro:Biotin_lipoyl	InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004742	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006090	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016740	GO:GO:0016746	GO:GO:0045254	InterPro:IPR000089	InterPro:IPR004167
InterPro:IPR023213	InterPro:IPR036625	InterPro:LAT1	EnsemblPlantsGene:Os07g0410100	EnsemblPlants:Os07t0410100-01	PFAM:PF00198
PFAM:PF00364	PFAM:PF02817	ScanProsite:PS00189	PFscan:PS50968	PFscan:PS51826	InterPro:PSBD
PANTHER:PTHR43178	PANTHER:PTHR43178:SF4	UniProt:Q7XAL3	SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777
InterPro:Single_hybrid_motif	TIGRFAMs:TIGR01349	UniParc:UPI00001B61E7	RefSeq:XP_015647685.1	SEG:seg	:

Description

Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12). (Os07t0410100-01)

Coordinates

chr7:-:12811710..12819394

Molecular Weight (calculated)

58775.2 Da

IEP (calculated)

8.591

GRAVY (calculated)

-0.426

Length

541 amino acids

Sequence
(BLAST)

001: MSAAHLLRHS RKLRSLHNAL DCERSGLVRY FSTASGSFPT KGNGAEKRIG GARFPQRKQP GKELETSKLS LGLNGSYTCR RSPNNFIPNT ITGLNGSLSC
101: GQIASARSFS SSADLPPHQE IGMPSLSPTM TEGNIARWLK KEGDKVSPGE VLCEVETDKA TVEMECMEEG YLAKIIHGDG SKEIKVGEII AVTVEEEGDI
201: KKFKDYKPST LAAPVAPSEL KAQSEPTEPK VEEREPSKAS ELKAPRTEEP SRSGDRIFSS PLARKLAEDN NVPLSSVKGT GPDGRILKAD IEDYLAKGCR
301: KEALAAPGLS YTDVPNAQIR KVTANRLLSS KQTIPHYYLT VDTRVDNLIK LRGELNPLQE SSGGKKISIN DLVIKAAALA LRKVPQCNSS WMNDFIRQYH
401: NVNINVAVQT EHGLFVPVIR DADKKGLGMI AEEVKQLAQR ARDNSLKPDD YEGGTFTISN LGGPFGIKQF CAIINPPQSA ILAIGSAERR VIPGSANGQY
501: EFGSFMSATM SCDHRVIDGA IGAEFLKAFK GYIENPTSML L

Best Arabidopsis Sequence Match ( AT1G54220.2 )
(BLAST)

001: MAYASRIINH SKKLKDVSTL LRRENAATIR YYSNTNRAPL NREDTFNSRL GYPPLERISI CSTSTLPVSI IFSTTRSNLS SAMGRPIFGK EFSCLMQSAR
101: GFSSGSDLPP HQEIGMPSLS PTMTEGNIAR WLKKEGDKVA PGEVLCEVET DKATVEMECM EEGYLAKIVK AEGSKEIQVG EVIAITVEDE EDIGKFKDYT
201: PSSTADAAPT KAEPTPAPPK EEKVKQPSSP PEPKASKPST PPTGDRVFAS PLARKLAEDN NVPLSDIEGT GPEGRIVKAD IDEYLASSGK GATAKPSKST
301: DSKAPALDYV DIPHSQIRKV TASRLAFSKQ TIPHYYLTVD TCVDKLMALR SQLNSFKEAS GGKRISVNDL VVKAAALALR KVPQCNSSWT DDYIRQFKNV
401: NINVAVQTEN GLYVPVVKDA DRKGLSTIGE EVRLLAQKAK ENSLKPEDYE GGTFTVSNLG GPFGIKQFCA VVNPPQAAIL AVGSAEKRVV PGNGPDQFNF
501: ASYMPVTLSC DHRVVDGAIG AEWLKAFKGY IENPKSMLL

Arabidopsis Description

Acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:A0A178W5Y1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.