Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13593 | Canola | plastid | 91.88 | 92.45 |
| Bra025167.1-P | Field mustard | plastid | 91.67 | 92.24 |
| CDX83563 | Canola | plastid | 91.46 | 92.23 |
| Bra017345.1-P | Field mustard | plastid | 91.67 | 91.86 |
| CDY04184 | Canola | plastid | 91.46 | 91.65 |
| CDY39183 | Canola | plastid | 89.79 | 91.31 |
| GSMUA_Achr3P07350_001 | Banana | cytosol | 65.0 | 76.66 |
| Solyc05g009530.2.1 | Tomato | plastid | 72.71 | 76.03 |
| VIT_01s0011g03380.t01 | Wine grape | plastid | 75.83 | 74.59 |
| PGSC0003DMT400033754 | Potato | plastid | 71.46 | 74.57 |
| KRH75381 | Soybean | plastid | 63.75 | 71.66 |
| KRG90801 | Soybean | endoplasmic reticulum, nucleus | 73.33 | 69.57 |
| TraesCS5A01G476700.1 | Wheat | plastid | 67.71 | 68.57 |
| TraesCS5B01G489600.1 | Wheat | golgi | 67.5 | 68.21 |
| TraesCS5D01G490000.1 | Wheat | golgi, plastid, unclear | 67.29 | 68.14 |
| Os08t0431300-01 | Rice | plastid | 66.67 | 67.37 |
| TraesCS3B01G372900.1 | Wheat | plastid | 63.12 | 66.74 |
| HORVU5Hr1G061140.1 | Barley | plastid | 64.38 | 66.74 |
| EES15031 | Sorghum | plastid | 66.04 | 66.74 |
| Zm00001d032224_P001 | Maize | plastid | 65.42 | 66.67 |
| TraesCS5D01G212800.1 | Wheat | plastid | 64.17 | 66.52 |
| TraesCS5B01G204800.1 | Wheat | plastid | 63.75 | 66.09 |
| OQU89472 | Sorghum | plastid | 62.29 | 65.14 |
| Zm00001d020426_P001 | Maize | plastid | 60.83 | 64.32 |
| Os09t0408600-01 | Rice | plastid | 64.17 | 61.48 |
| AT1G34430.1 | Thale cress | plastid | 58.96 | 60.86 |
| TraesCS5A01G206600.2 | Wheat | plastid | 57.92 | 59.91 |
| Zm00001d050383_P001 | Maize | plastid | 65.0 | 59.77 |
| HORVU5Hr1G112850.3 | Barley | plastid | 64.79 | 58.02 |
| AT1G54220.1 | Thale cress | mitochondrion | 31.46 | 28.01 |
| AT3G13930.1 | Thale cress | mitochondrion | 30.62 | 27.27 |
| AT3G06850.1 | Thale cress | mitochondrion, plastid | 23.33 | 23.19 |
| AT5G55070.1 | Thale cress | mitochondrion | 19.58 | 20.26 |
| AT4G26910.1 | Thale cress | mitochondrion | 19.58 | 20.26 |
| AT3G52200.2 | Thale cress | mitochondrion | 27.92 | 18.79 |
Protein Annotations
| InterPro:2-oxoA_DH_lipoyl-BS | InterPro:2-oxoacid_DH_actylTfrase | Gene3D:2.40.50.100 | Gene3D:3.30.559.10 | Gene3D:4.10.320.10 | MapMan:5.1.2.2.2 |
| EntrezGene:822181 | ProteinID:AEE77080.1 | EMBL:AF066079 | ArrayExpress:AT3G25860 | EnsemblPlantsGene:AT3G25860 | RefSeq:AT3G25860 |
| TAIR:AT3G25860 | RefSeq:AT3G25860-TAIR-G | EnsemblPlants:AT3G25860.1 | TAIR:AT3G25860.1 | EMBL:AY037262 | ProteinID:BAB01047.1 |
| EMBL:BT002343 | InterPro:Biotin_lipoyl | InterPro:CAT-like_dom_sf | ncoils:Coil | InterPro:E3-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004742 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0005975 | GO:GO:0006086 | GO:GO:0006091 | GO:GO:0006096 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009507 |
| GO:GO:0009534 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 | GO:GO:0009941 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0022626 | InterPro:IPR000089 | InterPro:IPR004167 |
| InterPro:IPR023213 | InterPro:IPR036625 | Symbol:LTA2 | RefSeq:NP_189215.1 | PFAM:PF00198 | PFAM:PF00364 |
| PFAM:PF02817 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00189 | PFscan:PS50968 |
| PFscan:PS51826 | InterPro:PSBD | PANTHER:PTHR23151 | PANTHER:PTHR23151:SF75 | UniProt:Q9SQI8 | SUPFAM:SSF47005 |
| SUPFAM:SSF51230 | SUPFAM:SSF52777 | InterPro:Single_hybrid_motif | UniParc:UPI00000ABF42 | SEG:seg | : |
Description
LTA2Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SQI8]
Coordinates
chr3:+:9460433..9463013
Molecular Weight (calculated)
50083.0 Da
IEP (calculated)
8.796
GRAVY (calculated)
0.045
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSSSSFLS TASLTNSKSN ISFASSVSPS LRSVVFRSTT PATSHRRSMT VRSKIREIFM PALSSTMTEG KIVSWIKTEG EKLAKGESVV VVESDKADMD
101: VETFYDGYLA AIVVGEGETA PVGAAIGLLA ETEAEIEEAK SKAASKSSSS VAEAVVPSPP PVTSSPAPAI AQPAPVTAVS DGPRKTVATP YAKKLAKQHK
201: VDIESVAGTG PFGRITASDV ETAAGIAPSK SSIAPPPPPP PPVTAKATTT NLPPLLPDSS IVPFTAMQSA VSKNMIESLS VPTFRVGYPV NTDALDALYE
301: KVKPKGVTMT ALLAKAAGMA LAQHPVVNAS CKDGKSFSYN SSINIAVAVA INGGLITPVL QDADKLDLYL LSQKWKELVG KARSKQLQPH EYNSGTFTLS
401: NLGMFGVDRF DAILPPGQGA IMAVGASKPT VVADKDGFFS VKNTMLVNVT ADHRIVYGAD LAAFLQTFAK IIENPDSLTL
101: VETFYDGYLA AIVVGEGETA PVGAAIGLLA ETEAEIEEAK SKAASKSSSS VAEAVVPSPP PVTSSPAPAI AQPAPVTAVS DGPRKTVATP YAKKLAKQHK
201: VDIESVAGTG PFGRITASDV ETAAGIAPSK SSIAPPPPPP PPVTAKATTT NLPPLLPDSS IVPFTAMQSA VSKNMIESLS VPTFRVGYPV NTDALDALYE
301: KVKPKGVTMT ALLAKAAGMA LAQHPVVNAS CKDGKSFSYN SSINIAVAVA INGGLITPVL QDADKLDLYL LSQKWKELVG KARSKQLQPH EYNSGTFTLS
401: NLGMFGVDRF DAILPPGQGA IMAVGASKPT VVADKDGFFS VKNTMLVNVT ADHRIVYGAD LAAFLQTFAK IIENPDSLTL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.