Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 3
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os04t0654700-02 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G25545.1 | Os04t0654700-02 | AT1G22920.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG31546 | Sorghum | cytosol, endoplasmic reticulum, peroxisome | 83.4 | 85.83 |
| TraesCS3A01G143400.1 | Wheat | cytosol | 77.33 | 79.92 |
| TraesCS3B01G161700.1 | Wheat | cytosol | 76.92 | 79.5 |
| TraesCS3D01G144200.1 | Wheat | cytosol | 76.92 | 79.5 |
| HORVU3Hr1G027540.1 | Barley | cytosol | 76.52 | 79.08 |
| Zm00001d039354_P001 | Maize | extracellular | 75.3 | 78.15 |
| KRH71066 | Soybean | cytosol | 38.46 | 37.7 |
| PGSC0003DMT400064666 | Potato | cytosol, plastid | 34.41 | 31.48 |
| Solyc05g010290.1.1 | Tomato | cytosol | 34.41 | 31.48 |
| AT3G25545.1 | Thale cress | cytosol | 32.79 | 30.34 |
| CDY46498 | Canola | nucleus | 32.79 | 30.11 |
| CDX99773 | Canola | cytosol | 32.79 | 30.0 |
| Bra026521.1-P | Field mustard | cytosol | 32.39 | 29.85 |
| VIT_09s0002g08050.t01 | Wine grape | cytosol | 12.96 | 24.81 |
| CDY33125 | Canola | cytosol | 18.22 | 23.81 |
| VIT_01s0010g01100.t01 | Wine grape | cytosol, nucleus, plasma membrane | 33.6 | 21.07 |
Protein Annotations
| EnsemblPlants:Os01t0219000-00 | EnsemblPlantsGene:Os01g0219000 | EntrezGene:4324590 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | PANTHER:PTHR37227 | ProteinID:BAA96201.1 | ProteinID:BAC00545.1 | ProteinID:BAF04330.1 |
| ProteinID:BAS71058.1 | RefSeq:XP_015633710.1 | SEG:seg | UniParc:UPI00000ABC47 | UniProt:Q9LWE3 | MapMan:35.2 |
Description
Conserved hypothetical protein. (Os01t0219000-00)
Coordinates
chr1:+:6523644..6524609
Molecular Weight (calculated)
25381.8 Da
IEP (calculated)
8.512
GRAVY (calculated)
0.104
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDVVTDAPP PSRFSPDDLD NFAAPPPQPT PILVVSPANP SPAPRRLLIL LISPTSLALL PHLPSPPPLH ASLLLPELPL GRSQPPIRVY LHAPSGTLLA
101: AAHGPAPVPA HRARAVARSL VSALQPEEVL VLDAVRSGAY RGRLAADEPV EGKLETRAAR GRGGVGAARG VAALAPPGSV VDGLGAAVLA ECEMRGKAAS
201: MVVTWPEGAR PAEFGVMRRV AAELGVDPAK AAAGRVAGRA ELDALYT
101: AAHGPAPVPA HRARAVARSL VSALQPEEVL VLDAVRSGAY RGRLAADEPV EGKLETRAAR GRGGVGAARG VAALAPPGSV VDGLGAAVLA ECEMRGKAAS
201: MVVTWPEGAR PAEFGVMRRV AAELGVDPAK AAAGRVAGRA ELDALYT
001: MEDVLTENPP PSRFFQEDLN NFVQPPESLP SPFIIFSNPK PELPLRPSLL IIAISSPSLY IFHSLPSKTL LGSLIMPEVP FSGNTMEPSL EDKSCNIYSL
101: SSADDKNLTL LVSVQLPVSP ERSNLVSRLL IAKDIIPERV IILDSIQSRN FRGRLSPDET LAAKLETSAE KKATTHTGLV NLDYFPSGSV IDGLSASLLS
201: RCQLKNIRGT LVISWPEFGP SVIRFAGALL KKIVPSLDVA SVNKDLEKNS SRTGLKKDTW LDSDLYT
101: SSADDKNLTL LVSVQLPVSP ERSNLVSRLL IAKDIIPERV IILDSIQSRN FRGRLSPDET LAAKLETSAE KKATTHTGLV NLDYFPSGSV IDGLSASLLS
201: RCQLKNIRGT LVISWPEFGP SVIRFAGALL KKIVPSLDVA SVNKDLEKNS SRTGLKKDTW LDSDLYT
Arabidopsis Description
AT3g25550/MWL2_17 [Source:UniProtKB/TrEMBL;Acc:Q9LSU9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.