Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 1
- peroxisome 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KXG27287 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G25545.1 | KXG27287 | AT1G22920.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039354_P001 | Maize | extracellular | 85.83 | 86.55 |
| Os01t0219000-00 | Rice | peroxisome | 85.83 | 83.4 |
| TraesCS3A01G143400.1 | Wheat | cytosol | 78.75 | 79.08 |
| TraesCS3D01G144200.1 | Wheat | cytosol | 78.33 | 78.66 |
| HORVU3Hr1G027540.1 | Barley | cytosol | 77.92 | 78.24 |
| TraesCS3B01G161700.1 | Wheat | cytosol | 77.5 | 77.82 |
| KRH71066 | Soybean | cytosol | 37.92 | 36.11 |
| Solyc05g010290.1.1 | Tomato | cytosol | 33.75 | 30.0 |
| PGSC0003DMT400064666 | Potato | cytosol, plastid | 33.33 | 29.63 |
| CDX99773 | Canola | cytosol | 31.25 | 27.78 |
| AT3G25545.1 | Thale cress | cytosol | 30.83 | 27.72 |
| Bra026521.1-P | Field mustard | cytosol | 30.83 | 27.61 |
| CDY46498 | Canola | nucleus | 30.83 | 27.51 |
| VIT_09s0002g08050.t01 | Wine grape | cytosol | 13.33 | 24.81 |
| CDY33125 | Canola | cytosol | 17.5 | 22.22 |
| VIT_01s0010g01100.t01 | Wine grape | cytosol, nucleus, plasma membrane | 33.75 | 20.56 |
Protein Annotations
| EnsemblPlants:KXG31546 | EnsemblPlantsGene:SORBI_3003G016400 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | PANTHER:PTHR37227 | ProteinID:KXG31546 | ProteinID:KXG31546.1 | SEG:seg | UniParc:UPI00081ABD89 |
| UniProt:A0A1B6Q0U2 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:1470257..1471710
Molecular Weight (calculated)
24802.0 Da
IEP (calculated)
7.811
GRAVY (calculated)
0.140
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDVITDVPP PSRFSPDDLD NFAAPPAQPT PILVVSPNPS PPTPRLLIVF ISPTSLALLA SPPPLHASLL LPDLPLHPHS HAPIRVYLHP SGALLAAAHG
101: AVPAHRARAA AKALVSRLQP EEVLVLDAVR SGSYRGRLAA DEPVEGKLET RAARARGGVG AARAVAALAP PGSVVDGLGA AVLAECEIRG KAASMVVTWP
201: AGARPAEFVV TRRVAEEIGV DTGKAAARVS GRPELDALYT
101: AVPAHRARAA AKALVSRLQP EEVLVLDAVR SGSYRGRLAA DEPVEGKLET RAARARGGVG AARAVAALAP PGSVVDGLGA AVLAECEIRG KAASMVVTWP
201: AGARPAEFVV TRRVAEEIGV DTGKAAARVS GRPELDALYT
001: MEDVLTENPP PSRFFQEDLN NFVQPPESLP SPFIIFSNPK PELPLRPSLL IIAISSPSLY IFHSLPSKTL LGSLIMPEVP FSGNTMEPSL EDKSCNIYSL
101: SSADDKNLTL LVSVQLPVSP ERSNLVSRLL IAKDIIPERV IILDSIQSRN FRGRLSPDET LAAKLETSAE KKATTHTGLV NLDYFPSGSV IDGLSASLLS
201: RCQLKNIRGT LVISWPEFGP SVIRFAGALL KKIVPSLDVA SVNKDLEKNS SRTGLKKDTW LDSDLYT
101: SSADDKNLTL LVSVQLPVSP ERSNLVSRLL IAKDIIPERV IILDSIQSRN FRGRLSPDET LAAKLETSAE KKATTHTGLV NLDYFPSGSV IDGLSASLLS
201: RCQLKNIRGT LVISWPEFGP SVIRFAGALL KKIVPSLDVA SVNKDLEKNS SRTGLKKDTW LDSDLYT
Arabidopsis Description
AT3g25550/MWL2_17 [Source:UniProtKB/TrEMBL;Acc:Q9LSU9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.