Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026521.1-P | Field mustard | cytosol | 82.4 | 82.09 |
| CDY46498 | Canola | nucleus | 82.02 | 81.41 |
| CDX99773 | Canola | cytosol | 81.65 | 80.74 |
| CDY33125 | Canola | cytosol | 56.18 | 79.37 |
| PGSC0003DMT400064666 | Potato | cytosol, plastid | 58.8 | 58.15 |
| Solyc05g010290.1.1 | Tomato | cytosol | 57.3 | 56.67 |
| VIT_09s0002g08050.t01 | Wine grape | cytosol | 23.97 | 49.61 |
| KRH71066 | Soybean | cytosol | 43.82 | 46.43 |
| VIT_01s0010g01100.t01 | Wine grape | cytosol, nucleus, plasma membrane | 58.05 | 39.34 |
| Os01t0219000-00 | Rice | peroxisome | 30.34 | 32.79 |
| TraesCS3B01G161700.1 | Wheat | cytosol | 28.84 | 32.22 |
| TraesCS3A01G143400.1 | Wheat | cytosol | 28.46 | 31.8 |
| HORVU3Hr1G027540.1 | Barley | cytosol | 28.09 | 31.38 |
| Zm00001d039354_P001 | Maize | extracellular | 27.72 | 31.09 |
| TraesCS3D01G144200.1 | Wheat | cytosol | 27.72 | 30.96 |
| KXG31546 | Sorghum | cytosol, endoplasmic reticulum, peroxisome | 27.72 | 30.83 |
Protein Annotations
| MapMan:35.2 | EntrezGene:822141 | ProteinID:AEE77024.1 | ArrayExpress:AT3G25545 | EnsemblPlantsGene:AT3G25545 | RefSeq:AT3G25545 |
| TAIR:AT3G25545 | RefSeq:AT3G25545-TAIR-G | EnsemblPlants:AT3G25545.1 | TAIR:AT3G25545.1 | EMBL:AY058108 | EMBL:AY090313 |
| Unigene:At.22640 | ProteinID:BAB01324.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0008150 | RefSeq:NP_566770.1 | PFAM:PF09754 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR37227 |
| InterPro:Proteasome_assmbl_chaperone_2 | UniProt:Q9LSU9 | UniParc:UPI00000A1459 | SEG:seg | : | : |
Description
AT3g25550/MWL2_17 [Source:UniProtKB/TrEMBL;Acc:Q9LSU9]
Coordinates
chr3:+:9276845..9278691
Molecular Weight (calculated)
29391.4 Da
IEP (calculated)
5.414
GRAVY (calculated)
-0.064
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDVLTENPP PSRFFQEDLN NFVQPPESLP SPFIIFSNPK PELPLRPSLL IIAISSPSLY IFHSLPSKTL LGSLIMPEVP FSGNTMEPSL EDKSCNIYSL
101: SSADDKNLTL LVSVQLPVSP ERSNLVSRLL IAKDIIPERV IILDSIQSRN FRGRLSPDET LAAKLETSAE KKATTHTGLV NLDYFPSGSV IDGLSASLLS
201: RCQLKNIRGT LVISWPEFGP SVIRFAGALL KKIVPSLDVA SVNKDLEKNS SRTGLKKDTW LDSDLYT
101: SSADDKNLTL LVSVQLPVSP ERSNLVSRLL IAKDIIPERV IILDSIQSRN FRGRLSPDET LAAKLETSAE KKATTHTGLV NLDYFPSGSV IDGLSASLLS
201: RCQLKNIRGT LVISWPEFGP SVIRFAGALL KKIVPSLDVA SVNKDLEKNS SRTGLKKDTW LDSDLYT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.