Factsheet for Bra001220.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08029	Canola	mitochondrion	92.31	94.02
CDX74077	Canola	mitochondrion, plastid	90.89	93.93
AT3G06850.1	Thale cress	mitochondrion, plastid	78.54	80.33
Bra040295.1-P	Field mustard	mitochondrion	33.2	63.81
VIT_05s0077g02080.t01	Wine grape	cytosol	54.45	58.1
Solyc01g066520.2.1	Tomato	plastid	54.25	53.07
PGSC0003DMT400029466	Potato	mitochondrion	53.64	52.48
KRH02272	Soybean	mitochondrion	53.64	51.46
HORVU2Hr1G012440.1	Barley	cytosol	45.75	51.25
EES02874	Sorghum	mitochondrion	54.05	51.05
KRH50815	Soybean	mitochondrion	52.83	50.68
Zm00001d040670_P004	Maize	mitochondrion	53.24	50.29
TraesCS2D01G073400.1	Wheat	mitochondrion	51.42	50.0
TraesCS2A01G074700.1	Wheat	nucleus	51.21	49.51
GSMUA_Achr10P...	Banana	mitochondrion	51.42	47.83
Bra028057.1-P	Field mustard	plastid	22.06	23.96
Bra025167.1-P	Field mustard	plastid	23.08	23.9
Bra017345.1-P	Field mustard	plastid	23.08	23.8
Bra001531.1-P	Field mustard	mitochondrion, plastid	22.06	23.39
Bra027386.1-P	Field mustard	mitochondrion	23.28	23.0
Bra037976.1-P	Field mustard	mitochondrion	24.9	22.74
Bra035551.1-P	Field mustard	mitochondrion	18.02	20.46
Bra016809.1-P	Field mustard	mitochondrion, plastid	19.64	20.42
Bra002934.1-P	Field mustard	mitochondrion	18.42	19.53
Bra028992.1-P	Field mustard	mitochondrion	18.62	18.62
Bra033446.1-P	Field mustard	mitochondrion	23.28	17.94
Bra006910.1-P	Field mustard	mitochondrion	19.43	13.15

Protein Annotations

KEGG:00280+2.3.1.168	KEGG:00640+2.3.1.168	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	Gene3D:2.40.50.100	Gene3D:3.30.559.10
Gene3D:4.10.320.10	MapMan:4.2.7.2.2	InterPro:BCKADH_E2	InterPro:Biotin_lipoyl	EnsemblPlantsGene:Bra001220	EnsemblPlants:Bra001220.1
EnsemblPlants:Bra001220.1-P	InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006950
GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009605	GO:GO:0009628
GO:GO:0009646	GO:GO:0009744	GO:GO:0009987	GO:GO:0009991	GO:GO:0016407	GO:GO:0016740
GO:GO:0016746	GO:GO:0043617	InterPro:IPR000089	InterPro:IPR004167	InterPro:IPR023213	InterPro:IPR036625
UniProt:M4CAJ1	PFAM:PF00198	PFAM:PF00364	PFAM:PF02817	ScanProsite:PS00189	PFscan:PS50968
PFscan:PS51826	InterPro:PSBD	PANTHER:PTHR43178	PANTHER:PTHR43178:SF5	SUPFAM:SSF47005	SUPFAM:SSF51230
SUPFAM:SSF52777	InterPro:Single_hybrid_motif	UniParc:UPI00025403FE	SEG:seg	:	:

Description

AT3G06850 (E=1e-207) BCE2, LTA1, DIN3 | BCE2; acetyltransferase/ alpha-ketoacid dehydrogenase/ dihydrolipoamide branched chain acyltransferase

Coordinates

chrA03:-:15397233..15399463

Molecular Weight (calculated)

54420.2 Da

IEP (calculated)

8.324

GRAVY (calculated)

-0.051

Length

494 amino acids

Sequence
(BLAST)

001: MIARRIWRSH RFLRPFSSSS VCAPPLLAPY HSQSFASRPF LVPSLSLMKW CGRGGGGGGS RSWYSNEAIS IDSNAGGGFI DVPLAQTGEG IAECELLKWF
101: VKEGDPVEEF QPLCEVQSDK ATIEITSRFK GKVALISHAP GDIIKRLWLS WLEKMLTILF KYPLILQKID ALQVSSDTPK NVEPICSKPK LDTLVGALST
201: PAVRTLAKDL GIDINLVIGS GKDGRVLKED VLQFSSQKQN VTDSAPSENP VIRGDSVSTN FEDQIVPLRG FNRAMVKTMT MATKVPHFHF VEEINCDALV
301: KLKHFFKEHN TDSTVKHTFL PTLIKSLSMA LTKYPYVNGC FNEESLEIIL KGSHNIGVAM ATEHGLVVPN IKNVQSLSLL EITKEMSRLQ HLATNNKLSP
401: EDVTGGTITL SNIGAIGGKF GSPLLNLPEV AIIALGRIEK VPKFKEDGSV YPASTMMVNI AADHRVLDGA TVARFCCQWK EYIEKPELLM LQMR

Best Arabidopsis Sequence Match ( AT3G06850.2 )
(BLAST)

001: MIARRIWRSH RFLRPFSSSS VCSPPFRVPE YLSQSSSSPA SRPFFVHPPT LMKWGGGSRS WFSNEAMATD SNSGLIDVPL AQTGEGIAEC ELLKWFVKEG
101: DSVEEFQPLC EVQSDKATIE ITSRFKGKVA LISHSPGDII KVGETLVRLA VEDSQDSLLT TDSSEIVTLG GSKQGTENLL GALSTPAVRN LAKDLGIDIN
201: VITGTGKDGR VLKEDVLRFS DQKGFVTDSV SSEHAVIGGD SVSTKASSNF EDKTVPLRGF SRAMVKTMTM ATSVPHFHFV EEINCDSLVE LKQFFKENNT
301: DSTIKHTFLP TLIKSLSMAL TKYPFVNSCF NAESLEIILK GSHNIGVAMA TEHGLVVPNI KNVQSLSLLE ITKELSRLQH LAANNKLNPE DVTGGTITLS
401: NIGAIGGKFG SPLLNLPEVA IIALGRIEKV PKFSKEGTVY PASIMMVNIA ADHRVLDGAT VARFCCQWKE YVEKPELLML QMR

Arabidopsis Description

BCE2Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Z1]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.