CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08029	Canola	mitochondrion	96.23	94.85
Bra001220.1-P	Field mustard	mitochondrion	93.93	90.89
AT3G06850.1	Thale cress	mitochondrion, plastid	82.64	81.78
CDY34925	Canola	mitochondrion	36.61	68.09
VIT_05s0077g02080.t01	Wine grape	cytosol	57.11	58.96
Solyc01g066520.2.1	Tomato	plastid	57.74	54.65
PGSC0003DMT400029466	Potato	mitochondrion	56.9	53.86
KRH02272	Soybean	mitochondrion	56.69	52.62
EES02874	Sorghum	mitochondrion	57.53	52.58
KRH50815	Soybean	mitochondrion	56.49	52.43
HORVU2Hr1G012440.1	Barley	cytosol	48.33	52.38
Zm00001d040670_P004	Maize	mitochondrion	56.49	51.63
TraesCS2D01G073400.1	Wheat	mitochondrion	54.39	51.18
TraesCS2A01G074700.1	Wheat	nucleus	54.18	50.68
GSMUA_Achr10P...	Banana	mitochondrion	55.23	49.72
CDX73652	Canola	mitochondrion	10.46	26.74
CDY12039	Canola	plastid	23.01	24.44
CDY03145	Canola	plastid	23.01	24.12
CDY13593	Canola	plastid	23.85	23.9
CDX83563	Canola	plastid	23.64	23.74
CDX82504	Canola	plastid	26.57	23.61
CDY39183	Canola	plastid	23.22	23.52
CDY55206	Canola	mitochondrion	25.1	23.44
CDY04184	Canola	plastid	23.43	23.38
CDY33075	Canola	mitochondrion, plastid	26.57	22.88
CDX97529	Canola	mitochondrion	26.78	22.78
CDX75740	Canola	mitochondrion, plastid	26.57	22.64
CDY24058	Canola	mitochondrion	26.15	22.52
CDY21016	Canola	mitochondrion, plastid	21.13	21.22
CDY31217	Canola	mitochondrion, plastid	21.34	21.21
CDY23198	Canola	mitochondrion	7.74	20.44
CDY20790	Canola	mitochondrion	19.25	19.78
CDY06613	Canola	mitochondrion	19.25	19.74
CDY17300	Canola	mitochondrion	19.25	19.74
CDY19918	Canola	mitochondrion	19.04	19.61
CDX95323	Canola	mitochondrion	23.64	17.63
CDY12012	Canola	plastid	19.25	17.62
CDY36727	Canola	plastid	19.67	17.57
CDY23199	Canola	mitochondrion, plastid	24.27	16.84
CDY69187	Canola	cytosol, nucleus	0.21	0.16
CDY17299	Canola	cytosol, plastid	0.21	0.15

Protein Annotations

KEGG:00062+2.3.1.16	KEGG:00071+2.3.1.16	KEGG:00280+2.3.1.168	KEGG:00280+2.3.1.168+2.3.1.16	KEGG:00281+2.3.1.16	KEGG:00362+2.3.1.16
KEGG:00592+2.3.1.16	KEGG:00640+2.3.1.168	KEGG:00642+2.3.1.16	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	Gene3D:2.40.50.100
Gene3D:3.30.559.10	Gene3D:4.10.320.10	MapMan:4.2.7.2.2	GO:A0A078CB66	InterPro:BCKADH_E2	InterPro:Biotin_lipoyl
InterPro:CAT-like_dom_sf	EnsemblPlants:CDX74077	ProteinID:CDX74077	ProteinID:CDX74077.1	InterPro:E3-bd_dom_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	EnsemblPlantsGene:GSBRNA2T00111827001
InterPro:IPR000089	InterPro:IPR004167	InterPro:IPR023213	InterPro:IPR036625	PFAM:PF00198	PFAM:PF00364
PFAM:PF02817	ScanProsite:PS00189	PFscan:PS50968	PFscan:PS51826	InterPro:PSBD	PANTHER:PTHR43178
PANTHER:PTHR43178:SF5	MetaCyc:PWY-5046	MetaCyc:PWY-5136	MetaCyc:PWY-6435	MetaCyc:PWY-6863	MetaCyc:PWY-6945
MetaCyc:PWY-6946	MetaCyc:PWY-6948	MetaCyc:PWY-7094	MetaCyc:PWY-7288	MetaCyc:PWY-7337	MetaCyc:PWY-7338
MetaCyc:PWY-7339	MetaCyc:PWY-7340	MetaCyc:PWY-735	MetaCyc:PWY-7606	MetaCyc:PWY-7654	MetaCyc:PWY-7726
SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777	InterPro:Single_hybrid_motif	UniParc:UPI0004EF1764	SEG:seg

Description

BnaA03g29700D

Coordinates

chrLK031800:+:1203219..1205760

Molecular Weight (calculated)

52145.1 Da

IEP (calculated)

6.789

GRAVY (calculated)

-0.058

Length

478 amino acids

Sequence
(BLAST)

001: MIARRIWRSH RFLRPFSSSS ACAPPLLAPY HSQSFASPTS RPFLVPSLSV MKWSGGGGSR SLFSNEAMSI DSNAGGGFID VPLAQTGEGI AECELLKWFV
101: KEGDPVEEFQ PLCEVQSDKA TIEITSRFKG KVALISHAPG DIIKVGETLV KLAVEDANDA LQVSSDTPEN VEPICSKPKL DSLVGALSTP AVRTLAKDLG
201: IDINLVIGSG KDGRVLKEDV LRFGGQKENV TEDPVIRGDS VSTNFEDQIV PLRGFNRAMV KTMTMATKVP HFHFVEEINC DALVKLKHFF KEHNTDSTVK
301: HTFLPTLIKS LSMALTKYPY VNGCFNEESL EIVLKGSHNI GVAMATEHGL VVPNIKNVQS LSLLEITKEM SRLQHLATNN KLSPEDVTGG TITLSNIGAI
401: GGKFGSPLLN LPEVAIIALG RIEKVPKFKE DGSVYPASTM MVNIAADHRV LDGATVARFC CQWKEYIEKP ELLMLQMR

Best Arabidopsis Sequence Match ( AT3G06850.2 )
(BLAST)

001: MIARRIWRSH RFLRPFSSSS VCSPPFRVPE YLSQSSSSPA SRPFFVHPPT LMKWGGGSRS WFSNEAMATD SNSGLIDVPL AQTGEGIAEC ELLKWFVKEG
101: DSVEEFQPLC EVQSDKATIE ITSRFKGKVA LISHSPGDII KVGETLVRLA VEDSQDSLLT TDSSEIVTLG GSKQGTENLL GALSTPAVRN LAKDLGIDIN
201: VITGTGKDGR VLKEDVLRFS DQKGFVTDSV SSEHAVIGGD SVSTKASSNF EDKTVPLRGF SRAMVKTMTM ATSVPHFHFV EEINCDSLVE LKQFFKENNT
301: DSTIKHTFLP TLIKSLSMAL TKYPFVNSCF NAESLEIILK GSHNIGVAMA TEHGLVVPNI KNVQSLSLLE ITKELSRLQH LAANNKLNPE DVTGGTITLS
401: NIGAIGGKFG SPLLNLPEVA IIALGRIEKV PKFSKEGTVY PASIMMVNIA ADHRVLDGAT VARFCCQWKE YVEKPELLML QMR

Arabidopsis Description

BCE2Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Z1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.