CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50815	Soybean	mitochondrion	93.2	93.2
VIT_05s0077g02080.t01	Wine grape	cytosol	58.45	65.01
Solyc01g066520.2.1	Tomato	plastid	57.48	58.61
PGSC0003DMT400029466	Potato	mitochondrion	57.48	58.61
AT3G06850.1	Thale cress	mitochondrion, plastid	53.79	57.35
CDX74077	Canola	mitochondrion, plastid	52.62	56.69
CDY08029	Canola	mitochondrion	53.01	56.29
HORVU2Hr1G012440.1	Barley	cytosol	47.77	55.78
EES02874	Sorghum	mitochondrion	55.15	54.3
Zm00001d040670_P004	Maize	mitochondrion	54.76	53.92
Bra001220.1-P	Field mustard	mitochondrion	51.46	53.64
GSMUA_Achr10P...	Banana	mitochondrion	55.15	53.48
TraesCS2D01G073400.1	Wheat	mitochondrion	52.62	53.35
TraesCS2A01G074700.1	Wheat	nucleus	52.62	53.03
KRG92074	Soybean	cytosol, mitochondrion	6.02	28.18
KRH34962	Soybean	plastid	20.0	21.96
KRG91819	Soybean	endoplasmic reticulum, nucleus	19.81	21.94
KRG90801	Soybean	endoplasmic reticulum, nucleus	21.36	21.74
KRH75381	Soybean	plastid	17.86	21.55
KRH06095	Soybean	mitochondrion	21.75	20.48
KRH47526	Soybean	mitochondrion	21.75	20.48
KRH14369	Soybean	nucleus	17.67	19.61
KRH73773	Soybean	mitochondrion	17.28	19.18
KRH34708	Soybean	mitochondrion	22.33	17.01
KRG92075	Soybean	mitochondrion	16.5	16.41

Protein Annotations

KEGG:00280+2.3.1.168	KEGG:00640+2.3.1.168	EntrezGene:100778785	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	Gene3D:2.40.50.100
Gene3D:3.30.559.10	Gene3D:4.10.320.10	MapMan:4.2.7.2.2	EMBL:ACUP02010302	InterPro:BCKADH_E2	InterPro:Biotin_lipoyl
InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf	EnsemblPlantsGene:GLYMA_17G028000	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	UniProt:I1MRK4	InterPro:IPR000089	InterPro:IPR004167
InterPro:IPR023213	InterPro:IPR036625	EnsemblPlants:KRH02272	ProteinID:KRH02272	ProteinID:KRH02272.1	PFAM:PF00198
PFAM:PF00364	PFAM:PF02817	ScanProsite:PS00189	PFscan:PS50968	PFscan:PS51826	InterPro:PSBD
PANTHER:PTHR43178	PANTHER:PTHR43178:SF5	MetaCyc:PWY-5046	MetaCyc:PWY-5136	MetaCyc:PWY-6435	MetaCyc:PWY-6863
MetaCyc:PWY-6945	MetaCyc:PWY-6946	MetaCyc:PWY-6948	MetaCyc:PWY-7094	MetaCyc:PWY-7288	MetaCyc:PWY-7337
MetaCyc:PWY-7338	MetaCyc:PWY-7339	MetaCyc:PWY-7340	MetaCyc:PWY-735	MetaCyc:PWY-7606	MetaCyc:PWY-7654
MetaCyc:PWY-7726	SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777	InterPro:Single_hybrid_motif	UniParc:UPI000233E7F5
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:2092940..2097102

Molecular Weight (calculated)

56265.3 Da

IEP (calculated)

7.029

GRAVY (calculated)

-0.159

Length

515 amino acids

Sequence
(BLAST)

001: MLSNRIWQRR ALISARTLFS GSASHSSSSS HAISLRFAKA NAPSSSHVIF NFARVDRYWF STQPALELPA SKIVDVPLAQ TGEGIAECEL LKWYVQEGDY
101: VEDFQPLCEV QSDKATIEIT SRYKGKISNI LYVPGDIVKV GETLLKILVD ESTFPSGIPC DSENAKSPDT DQTLVNESVF TTVIDDSDNG KLIDSDPGKG
201: RQTGVSSTPA VRSLAKQHGI DITEICGTGK DGRILKEDVL NFSVKKGIIK NPSTVLQSDS GEQLQGAEGY NCNVATKSYR PSEDRTLPLR GFQRAMVKSM
301: SLAAKVPHFH YVDEINCDAL VELKTSFQKN NPYPDVKYTF LPILIKSLSM ALSKYPFMNS CFKEDALEVI LKGSHNVGIA MATSHGLVVP NIKNVQSLSI
401: MEITKELARL QQLASNNKLT SEDICGGTIT LSNIGAIGGK FGSPLINLPE VSIIAVGRIQ KVPRFADNGN VYPASLVNVN IGADHRVLDG ATVARFCNEW
501: KQLIENPELL TLHLK

Best Arabidopsis Sequence Match ( AT3G06850.2 )
(BLAST)

001: MIARRIWRSH RFLRPFSSSS VCSPPFRVPE YLSQSSSSPA SRPFFVHPPT LMKWGGGSRS WFSNEAMATD SNSGLIDVPL AQTGEGIAEC ELLKWFVKEG
101: DSVEEFQPLC EVQSDKATIE ITSRFKGKVA LISHSPGDII KVGETLVRLA VEDSQDSLLT TDSSEIVTLG GSKQGTENLL GALSTPAVRN LAKDLGIDIN
201: VITGTGKDGR VLKEDVLRFS DQKGFVTDSV SSEHAVIGGD SVSTKASSNF EDKTVPLRGF SRAMVKTMTM ATSVPHFHFV EEINCDSLVE LKQFFKENNT
301: DSTIKHTFLP TLIKSLSMAL TKYPFVNSCF NAESLEIILK GSHNIGVAMA TEHGLVVPNI KNVQSLSLLE ITKELSRLQH LAANNKLNPE DVTGGTITLS
401: NIGAIGGKFG SPLLNLPEVA IIALGRIEKV PKFSKEGTVY PASIMMVNIA ADHRVLDGAT VARFCCQWKE YVEKPELLML QMR

Arabidopsis Description

BCE2Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Z1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.