Factsheet for TraesCS2D01G073400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G074700.1	Wheat	nucleus	94.49	93.93
HORVU2Hr1G012440.1	Barley	cytosol	75.98	87.53
EES02874	Sorghum	mitochondrion	75.59	73.42
Zm00001d040670_P004	Maize	mitochondrion	74.02	71.89
VIT_05s0077g02080.t01	Wine grape	cytosol	55.31	60.69
GSMUA_Achr10P...	Banana	mitochondrion	58.46	55.93
AT3G06850.1	Thale cress	mitochondrion, plastid	51.77	54.45
CDX74077	Canola	mitochondrion, plastid	51.18	54.39
CDY08029	Canola	mitochondrion	51.18	53.61
PGSC0003DMT400029466	Potato	mitochondrion	52.56	52.87
KRH02272	Soybean	mitochondrion	53.35	52.62
Solyc01g066520.2.1	Tomato	plastid	51.97	52.28
KRH50815	Soybean	mitochondrion	52.17	51.46
Bra001220.1-P	Field mustard	mitochondrion	50.0	51.42
TraesCS5D01G490000.1	Wheat	golgi, plastid, unclear	21.85	23.42
TraesCS5D01G126000.1	Wheat	cytosol	18.7	23.28
TraesCS5D01G212800.1	Wheat	plastid	20.87	22.89
TraesCS6D01G024400.1	Wheat	golgi, mitochondrion	23.23	21.77
TraesCS7D01G011600.1	Wheat	golgi, mitochondrion	22.24	20.89
TraesCS4D01G070200.1	Wheat	mitochondrion	17.32	20.09
TraesCS7D01G301900.1	Wheat	golgi	20.67	20.04
TraesCS2D01G039500.2	Wheat	mitochondrion	16.73	19.1
TraesCS5D01G125900.1	Wheat	plastid	1.97	3.28

Protein Annotations

KEGG:00280+2.3.1.168	KEGG:00640+2.3.1.168	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	Gene3D:2.40.50.100	Gene3D:3.30.559.10
Gene3D:4.10.320.10	MapMan:4.2.7.2.2	InterPro:BCKADH_E2	InterPro:Biotin_lipoyl	InterPro:CAT-like_dom_sf	InterPro:E3-bd_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006950	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009605	GO:GO:0009628	GO:GO:0009646	GO:GO:0009744	GO:GO:0009987
GO:GO:0009991	GO:GO:0016407	GO:GO:0016740	GO:GO:0016746	GO:GO:0043617	InterPro:IPR000089
InterPro:IPR004167	InterPro:IPR023213	InterPro:IPR036625	PFAM:PF00198	PFAM:PF00364	PFAM:PF02817
ScanProsite:PS00189	PFscan:PS50968	PFscan:PS51826	InterPro:PSBD	PANTHER:PTHR43178	PANTHER:PTHR43178:SF5
SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777	InterPro:Single_hybrid_motif	EnsemblPlantsGene:TraesCS2D01G073400	EnsemblPlants:TraesCS2D01G073400.1
TIGR:cd06849	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:30745877..30748901

Molecular Weight (calculated)

55188.4 Da

IEP (calculated)

8.232

GRAVY (calculated)

-0.195

Length

508 amino acids

Sequence
(BLAST)

001: MAWRRLAARS RRCPVPPAPR PPAPRPPPPA GPAAATPPLR RLLLPLSPRR FAAAAASSPA RLFHAAAVRW GSRSLASDAS AAREPSAELV EVPLAQTGEG
101: IAECELLRWF VSEGDQVDEF QQLCEVQSDK ATIEITSRFK GTVHQIQFAP GDIVKVGETL LKMIVNDSQV VPHDSLASSP DIPLGVDTST SPSSQGNAPR
201: GSLSTPAVRH LVKQYGLNID DIQGTGRDGR VLKEDVLNYA ASKGLLQEPP SAMEENVGKV ELPEGGKPLL DPQFYEDKRI PLRGYQRSMV KSMSLAAKVP
301: HFHYLEEINC DALVKLKASF QKENKDHDVK HTFLPFLIKS LSVALSKYPL LNSSFIEEAN EVTLKGSHNI GVAMATAQGL VVPSIKKVQS LSILEITKEL
401: SRLHEMALQN RLSTNDITGG TITLSNIGAI GGKFGSPVLN LPEVAIIALG RIQKLPRFDD EENVYPSSTI NVTVGADHRV VDGATVARFC NEWKSLVEKP
501: ELLLLHMR

Best Arabidopsis Sequence Match ( AT3G06850.2 )
(BLAST)

001: MIARRIWRSH RFLRPFSSSS VCSPPFRVPE YLSQSSSSPA SRPFFVHPPT LMKWGGGSRS WFSNEAMATD SNSGLIDVPL AQTGEGIAEC ELLKWFVKEG
101: DSVEEFQPLC EVQSDKATIE ITSRFKGKVA LISHSPGDII KVGETLVRLA VEDSQDSLLT TDSSEIVTLG GSKQGTENLL GALSTPAVRN LAKDLGIDIN
201: VITGTGKDGR VLKEDVLRFS DQKGFVTDSV SSEHAVIGGD SVSTKASSNF EDKTVPLRGF SRAMVKTMTM ATSVPHFHFV EEINCDSLVE LKQFFKENNT
301: DSTIKHTFLP TLIKSLSMAL TKYPFVNSCF NAESLEIILK GSHNIGVAMA TEHGLVVPNI KNVQSLSLLE ITKELSRLQH LAANNKLNPE DVTGGTITLS
401: NIGAIGGKFG SPLLNLPEVA IIALGRIEKV PKFSKEGTVY PASIMMVNIA ADHRVLDGAT VARFCCQWKE YVEKPELLML QMR

Arabidopsis Description

BCE2Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Z1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.