Factsheet for HORVU4Hr1G011850.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G069310.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26910.1	HORVU6Hr1G069310.1	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G243500.1	Wheat	golgi, mitochondrion, unclear	91.39	99.32
TraesCS4B01G071300.1	Wheat	mitochondrion	90.97	98.86
TraesCS4D01G070200.1	Wheat	mitochondrion	90.76	98.63
Os02t0514700-00	Rice	mitochondrion	68.07	81.41
Solyc12g005080.1.1	Tomato	nucleus	58.61	75.41
VIT_19s0090g00750.t01	Wine grape	cytosol	56.93	69.13
Bra035551.1-P	Field mustard	mitochondrion	61.55	67.36
PGSC0003DMT400071652	Potato	mitochondrion	65.55	66.24
Solyc07g064800.2.1	Tomato	extracellular, nucleus	64.08	65.17
VIT_10s0116g01480.t01	Wine grape	mitochondrion	64.71	65.12
KRH14369	Soybean	nucleus	63.24	64.87
Bra002934.1-P	Field mustard	mitochondrion	63.45	64.81
CDY17300	Canola	mitochondrion	63.45	64.81
PGSC0003DMT400057449	Potato	mitochondrion	63.66	64.74
AT5G55070.1	Thale cress	mitochondrion	63.03	64.66
CDY19918	Canola	mitochondrion	62.82	64.44
KRH73773	Soybean	mitochondrion	62.82	64.44
CDY06613	Canola	mitochondrion	62.82	64.16
CDY20790	Canola	mitochondrion	62.6	64.09
AT4G26910.1	Thale cress	mitochondrion	60.71	62.28
Bra028992.1-P	Field mustard	mitochondrion	62.82	60.53
CDY21016	Canola	mitochondrion, plastid	60.08	60.08
Bra016809.1-P	Field mustard	mitochondrion, plastid	59.87	60.0
CDY31217	Canola	mitochondrion, plastid	60.08	59.46
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	12.39	58.42
CDY12012	Canola	plastid	63.66	58.05
CDY36727	Canola	plastid	63.66	56.64
HORVU7Hr1G072650.1	Barley	mitochondrion	24.79	22.52
HORVU6Hr1G003770.1	Barley	cytosol, mitochondrion	25.0	22.28
HORVU7Hr1G001330.9	Barley	plastid	25.0	20.62
HORVU5Hr1G061140.1	Barley	plastid	19.12	19.65
HORVU2Hr1G012440.1	Barley	cytosol	16.39	17.69
HORVU5Hr1G112850.3	Barley	plastid	19.12	16.98
HORVU5Hr1G038090.3	Barley	plastid	11.34	12.53

Protein Annotations

KEGG:00020+2.3.1.61	KEGG:00310+2.3.1.61	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.3.4.2	Gene3D:2.40.50.100
Gene3D:3.30.559.10	UniProt:A0A287N8F8	InterPro:Biotin_lipoyl	InterPro:CAT-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004149	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091
GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0016746
GO:GO:0045252	EnsemblPlantsGene:HORVU4Hr1G011850	EnsemblPlants:HORVU4Hr1G011850.1	InterPro:IPR000089	InterPro:IPR023213	PFAM:PF00198
PFAM:PF00364	ScanProsite:PS00189	PFscan:PS50968	PANTHER:PTHR43416	PANTHER:PTHR43416:SF5	SUPFAM:SSF51230
SUPFAM:SSF52777	InterPro:Single_hybrid_motif	InterPro:SucB	TIGRFAMs:TIGR01347	UniParc:UPI000B4773FB	SEG:seg

Description

No Description!

Coordinates

chrchr4H:-:37600154..37605851

Molecular Weight (calculated)

52153.0 Da

IEP (calculated)

9.677

GRAVY (calculated)

-0.297

Length

476 amino acids

Sequence
(BLAST)

001: RPVHHPSPTP RRGRIPFPSL PPPPTSSPSQ IPHTPLPRMA SRLASRLLLR RPAAVLSLLQ SSRHARHFST QLLEGAPRLP KPTCERYFLR NASPYQIWSR
101: SFASENGDLV EAVVPFMGES VTDGTLANFL KKPGDRVEAD EAIAQIETDK VTIDVSSPEA GVIEKFIASE GDTVTPGTKI AVISKSAAPS EAHVAPSEET
201: SQKETPPPPP PEKPKVEQKS PKVESVKTQA SKLASPSEPQ LPPKERERRV SMPRLRKRIA NRLKDSQNTF ALLTTFNEVD MTNLMKLRTD YKDEFVKKHG
301: VKLGLMSCFV KAAVSALQNQ PIVNAVIDGD DIIYRDYIDV SVAVGTSKGL VVPVIRDTEG MNFADIEKGI NSLAKKATEG ALSIDEMAGG TFTISNGGVY
401: GSLISTPIIN PPQSAILGMH SIVQRPVVVD GDILARPMMY LALTYDHRLI DGREAVLFLR RIKDVVEDPR RLLLDI

Best Arabidopsis Sequence Match ( AT5G55070.1 )
(BLAST)

001: MMLRAVFRRA SIRGSSSASG LGKSLQSSRV AVSAQFHSVS ATETLVPRGN HAHSFHHRSC PGCPDCSRTI INGYQGTALQ RWVRPFSSDS GDVVEAVVPH
101: MGESITDGTL AAFLKKPGDR VEADEAIAQI ETDKVTIDIA SPASGVIQEF LVKEGDTVEP GNKVARISTS ADAVSHVAPS EKAPEKPAPK PSPPAEKPKV
201: ESTKVAEKPK APSPPPPPPS KQSAKEPQLP PKDRERRVPM TRLRKRVATR LKDSQNTFAL LTTFNEVDMT NLMKLRSQYK DAFLEKHGVK LGLMSGFIKA
301: AVSALQHQPV VNAVIDGDDI IYRDYVDISI AVGTSKGLVV PVIRDADKMN FADIEKTING LAKKATEGTI SIDEMAGGSF TVSNGGVYGS LISTPIINPP
401: QSAILGMHSI VQRPMVVGGS VVPRPMMYVA LTYDHRLIDG REAVYFLRRI KDVVEDPQRL LLDI

Arabidopsis Description

Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLQ4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.