Factsheet for GSMUA_Achr10P11960_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P18670_001	Banana	mitochondrion	69.31	15.49
GSMUA_AchrUn_...	Banana	mitochondrion	66.34	14.82
Os02t0514700-00	Rice	mitochondrion	57.43	14.57
TraesCS2B01G053600.1	Wheat	mitochondrion	58.42	13.82
TraesCS2D01G039500.2	Wheat	mitochondrion	59.41	13.48
TraesCS2A01G041100.1	Wheat	golgi, nucleus, unclear	59.41	13.48
TraesCS4D01G070200.1	Wheat	mitochondrion	58.42	13.47
TraesCS4B01G071300.1	Wheat	mitochondrion	58.42	13.47
TraesCS4A01G243500.1	Wheat	golgi, mitochondrion, unclear	58.42	13.47
Os04t0394200-01	Rice	mitochondrion	58.42	13.41
GSMUA_Achr9P01190_001	Banana	cytosol	65.35	13.28
Zm00001d025258_P009	Maize	mitochondrion	57.43	13.0
OQU93042	Sorghum	mitochondrion	58.42	12.63
HORVU4Hr1G011850.1	Barley	mitochondrion, plastid	58.42	12.39
Zm00001d003923_P002	Maize	mitochondrion	56.44	12.05
GSMUA_Achr9P08540_001	Banana	cytosol	13.86	5.86
GSMUA_AchrUn_...	Banana	mitochondrion	22.77	4.65
GSMUA_Achr3P17420_001	Banana	cytosol	7.92	3.21
GSMUA_Achr10P...	Banana	mitochondrion, vacuole	19.8	3.15
GSMUA_Achr10P...	Banana	mitochondrion	15.84	3.01
GSMUA_Achr3P07350_001	Banana	cytosol	11.88	2.95
Os01t0314100-01	Rice	mitochondrion	13.86	2.68
GSMUA_Achr9P08550_001	Banana	plastid	0.99	0.71
Os01t0314000-01	Rice	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr10P11960_001	EnsemblPlants:GSMUA_Achr10T11960_001	EnsemblPlantsGene:GSMUA_Achr10G11960_001	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	InterPro:2-oxoacid_DH_actylTfrase	InterPro:CAT-like_dom_sf
InterPro:IPR023213	PANTHER:PTHR43416	PANTHER:PTHR43416:SF5	PFAM:PF00198	SEG:seg	SUPFAM:SSF52777
UniParc:UPI000295D594	UniProt:M0RHH2	MapMan:35.2	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G11960_001]

Coordinates

chr10:+:21168498..21169525

Molecular Weight (calculated)

11405.8 Da

IEP (calculated)

4.408

GRAVY (calculated)

0.114

Length

101 amino acids

Sequence
(BLAST)

001: MFEGFSELIA TLTTFNELDQ TKCTNLLRSE YKDAFAEKHG MKLGLMSGFV KVTVSGLQNQ PIIDSVIDRD DIVYRDYIDI SIAVGTQKVY IWFELSGMLI
101: G

Best Arabidopsis Sequence Match ( AT4G26910.2 )
(BLAST)

001: MMMRAVIRRA ASNGSSPSLF AKSLQSSRVA ASSPSLLSGS ETGAYLHRGN HAHSFHNLAL PGNSGISRSA SLVSSTLQRW VRPFSAETGD TVEAVVPHMG
101: ESITDGTLAT FLKKPGERVQ ADEAIAQIET DKVTIDIASP ASGVIQEFLV NEGDTVEPGT KVAIISKSED TASQVTPSQK IPETTDTKPS PPAEDKQKPR
201: VESAPVAEKP KAPSSPPPPK QSAKEPQLPP KERERRVPMT RLRKRVATRL KDSQNTFALL TTFNEVDMTN LMKLRSQYKD AFYEKHGVKL GLMSGFIKAA
301: VSALQHQPVV NAVIDGDDII YRDYVDISIA VGTSKGLVVP VIRGADKMNF AEIEKTINSL AKKANEGTIS IDEMAGGSFT VSNGGVYGSL ISTPIINPPQ
401: SAILGMHSIV SRPMVVGGSV VPRPMMYVAL TYDHRLIDGR EAVYFLRRVK DVVEDPQRLL LDI

Arabidopsis Description

Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8H107]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.