Factsheet for HORVU7Hr1G001330.9

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G003770.1	mitochondrion, mitochondrion, mitochondrion
HORVU7Hr1G001330.9	mitochondrion, mitochondrion, mitochondrion

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54220.1	HORVU6Hr1G003770.1	AT1G54220.1	24846799
AT1G54220.1	HORVU7Hr1G001330.9	AT1G54220.1	24846799
AT1G54220.1	HORVU6Hr1G003770.1	AT3G13930.1	24846799
AT1G54220.1	HORVU7Hr1G001330.9	AT3G13930.1	24846799
AT3G13930.1	HORVU6Hr1G003770.1	AT3G13930.1	24846799
AT3G13930.1	HORVU7Hr1G001330.9	AT3G13930.1	24846799

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G011600.1	Wheat	golgi, mitochondrion	89.6	95.56
TraesCS4A01G481800.3	Wheat	mitochondrion, unclear	89.25	95.55
TraesCS7A01G014600.4	Wheat	golgi, mitochondrion	89.08	95.01
Os06t0105400-02	Rice	mitochondrion	78.86	82.73
HORVU6Hr1G003770.1	Barley	cytosol, mitochondrion	69.15	74.72
VIT_11s0016g01870.t01	Wine grape	mitochondrion	58.23	61.43
KRH47526	Soybean	mitochondrion	58.23	61.43
AT3G13930.1	Thale cress	mitochondrion	57.19	61.22
AT1G54220.1	Thale cress	mitochondrion	57.19	61.22
KRH06095	Soybean	mitochondrion	57.89	61.06
Bra001531.1-P	Field mustard	mitochondrion, plastid	49.22	60.94
Bra037976.1-P	Field mustard	mitochondrion	56.85	60.63
VIT_09s0002g01800.t01	Wine grape	mitochondrion	58.23	60.54
CDX82504	Canola	plastid	56.15	60.22
CDY33075	Canola	mitochondrion, plastid	57.54	59.82
Bra027386.1-P	Field mustard	mitochondrion	51.82	59.8
CDY24058	Canola	mitochondrion	56.85	59.1
PGSC0003DMT400048225	Potato	mitochondrion	56.5	59.06
CDX75740	Canola	mitochondrion, plastid	57.37	59.0
CDY55206	Canola	mitochondrion	52.34	58.98
CDX97529	Canola	mitochondrion	57.37	58.9
Solyc07g006790.2.1	Tomato	plastid	56.33	58.77
GSMUA_Achr10P...	Banana	mitochondrion, vacuole	60.49	54.96
HORVU7Hr1G072650.1	Barley	mitochondrion	32.76	36.07
HORVU5Hr1G061140.1	Barley	plastid	22.53	28.08
HORVU5Hr1G112850.3	Barley	plastid	23.57	25.37
HORVU4Hr1G011850.1	Barley	mitochondrion, plastid	20.62	25.0
HORVU2Hr1G012440.1	Barley	cytosol	17.68	23.13
HORVU5Hr1G038090.3	Barley	plastid	16.81	22.51

Protein Annotations

KEGG:00010+2.3.1.12	KEGG:00020+2.3.1.12	KEGG:00620+2.3.1.12	InterPro:2-oxoA_DH_lipoyl-BS	InterPro:2-oxoacid_DH_actylTfrase	MapMan:2.2.1.2
Gene3D:2.40.50.100	Gene3D:3.30.559.10	Gene3D:4.10.320.10	UniProt:A0A287VCQ0	InterPro:Biotin_lipoyl	InterPro:CAT-like_dom_sf
InterPro:E3-bd_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004742	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006090	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0016746	GO:GO:0045254	EnsemblPlantsGene:HORVU7Hr1G001330
EnsemblPlants:HORVU7Hr1G001330.9	InterPro:IPR000089	InterPro:IPR004167	InterPro:IPR023213	InterPro:IPR036625	InterPro:LAT1
PFAM:PF00198	PFAM:PF00364	PFAM:PF02817	ScanProsite:PS00189	PFscan:PS50968	PFscan:PS51826
InterPro:PSBD	PANTHER:PTHR43178	PANTHER:PTHR43178:SF4	SUPFAM:SSF47005	SUPFAM:SSF51230	SUPFAM:SSF52777
InterPro:Single_hybrid_motif	TIGRFAMs:TIGR01349	UniParc:UPI000B482018	SEG:seg	:	:

Description

Acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:A0A287VCQ0]

Coordinates

chrchr7H:-:2944034..2949500

Molecular Weight (calculated)

61947.7 Da

IEP (calculated)

7.960

GRAVY (calculated)

-0.343

Length

577 amino acids

Sequence
(BLAST)

001: TNRPSFILPL GESLSSPLPT DSAAPSPAPA PTMALLLRHS RKLRRVHGVL DWERGSIARH FSASACSAAA KGEAVSSSSV HGEYGKKVGS SSIFQDRQSG
101: KDLHTFKVSS REARGSYSLK RMPIATGVNS LFSCGQVVSA RQFSSGADLP PHEAIGMPSL SPTMTEGNIA RWVKKEGDKV SPGEVLCEVE TDKATVEMEC
201: MEEGYLAKIV CGDGAKEIKV GEIICITVEE EGDIEKFKDY KASSSPSAAA PAESKPQSEP VQPKEEKKEV SKAPEPTATK TEESSQSGDR LFSSPVARKL
301: AEDNNVPLSS LKGTGPDGRI LKADIEDYLS SASKGSKKEA AAAPGLGYVD LPNTQIRKVT ANRLLQSKQT IPHYYLTVDS RVDKLIKLRS ELNPMQDASG
401: GKKISINDLV IKAAALALRK VPACNSSWMN DFIRQYHNVN INVAVQTEHG LFVPVVRDAD KKGLATIADE VKQLALRARD NSLKPEDYEG GTFTVSNLGG
501: PFGIKQFCAI VNPPQSAILA IGSAEKRVVP GVEGQFEVGS FMSATLSCDH RVIDGAMGAE WLKAFKSYLE NPTTMLL

Best Arabidopsis Sequence Match ( AT3G13930.1 )
(BLAST)

001: MASRIINHSK KLKHVSALLR RDHAVAVRCF SNSTHPSLVG REDIFKARLN YSSVERISKC GTGNVTMLSG ISTTSTKLSS PMAGPKLFKE FISSQMRSVR
101: GFSSSSDLPP HQEIGMPSLS PTMTEGNIAR WLKKEGDKVA PGEVLCEVET DKATVEMECM EEGFLAKIVK EEGAKEIQVG EVIAITVEDE DDIQKFKDYT
201: PSSDTGPAAP EAKPAPSLPK EEKVEKPASA PEAKISKPSS APSEDRIFAS PLARKLAEDN NVPLSSIKGT GPEGRIVKAD VEDFLASGSK ETTAKPSKQV
301: DSKVPALDYV DIPHTQIRKV TASRLAFSKQ TIPHYYLTVD TCVDKMMGLR SQLNSFQEAS GGKRISVNDL VIKAAALALR KVPQCNSSWT DEYIRQFKNV
401: NINVAVQTEN GLYVPVVKDA DKKGLSTIGE EVRFLAQKAK ENSLKPEDYE GGTFTVSNLG GPFGIKQFCA VINPPQAAIL AIGSAEKRVV PGTGPDQYNV
501: ASYMSVTLSC DHRVIDGAIG AEWLKAFKGY IETPESMLL

Arabidopsis Description

Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8RWN9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.