Factsheet for TraesCS1B01G192400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G038060.2	Barley	cytosol	63.74	97.35
TraesCS1A01G190300.1	Wheat	cytosol	96.04	96.04
TraesCS1B01G235400.1	Wheat	cytosol	75.62	95.17
HORVU1Hr1G049910.1	Barley	cytosol	95.42	94.72
TraesCS1B01G235300.1	Wheat	cytosol	93.19	94.12
TraesCS1B01G235500.1	Wheat	cytosol	92.57	93.5
TraesCS4B01G268200.1	Wheat	cytosol	92.95	91.92
TraesCS4B01G268400.1	Wheat	golgi	92.33	91.76
EER92840	Sorghum	cytosol	91.21	90.99
Os03t0151800-02	Rice	cytosol, extracellular, nucleus, plasma membrane, plastid	91.09	90.98
EER94171	Sorghum	cytosol	91.09	90.86
Zm00001d014124_P001	Maize	cytosol, plasma membrane	90.97	90.63
Zm00001d032859_P006	Maize	plasma membrane	90.84	90.62
TraesCS3B01G154400.1	Wheat	cytosol	81.44	83.5
TraesCS3B01G172100.1	Wheat	cytosol	80.94	82.78
TraesCS1B01G259200.1	Wheat	cytosol	80.82	82.76
TraesCS3B01G171200.1	Wheat	cytosol	80.69	82.74
TraesCS1B01G419200.1	Wheat	cytosol	80.69	82.64
TraesCS3B01G172000.1	Wheat	cytosol	79.95	82.4
TraesCS3B01G171400.1	Wheat	cytosol	74.13	82.39
GSMUA_Achr3P00260_001	Banana	cytosol	49.75	82.38
TraesCS3B01G171300.1	Wheat	cytosol	72.28	80.11
TraesCS5B01G323100.1	Wheat	cytosol	57.3	79.69
TraesCS2B01G373100.1	Wheat	cytosol	29.21	41.48
TraesCS7B01G280400.1	Wheat	cytosol, unclear	16.58	33.5
TraesCS6B01G188500.1	Wheat	cytosol	16.46	33.25
TraesCS3B01G487900.1	Wheat	mitochondrion	30.57	33.15
TraesCS7B01G468900.1	Wheat	cytosol	16.21	32.91
TraesCS7B01G060900.1	Wheat	golgi	16.96	32.16
TraesCS6B01G376500.1	Wheat	golgi	16.96	32.16
TraesCS2B01G100400.1	Wheat	cytosol, plastid	16.09	31.33
TraesCS2B01G499600.1	Wheat	cytosol	15.97	30.94
TraesCS7B01G036400.1	Wheat	cytosol	15.47	29.27
TraesCS3B01G457100.1	Wheat	cytosol, golgi	15.72	29.26
TraesCS2B01G494200.1	Wheat	cytosol	16.34	28.95
TraesCS6B01G207100.1	Wheat	cytosol	14.85	28.71
TraesCS4B01G189200.1	Wheat	cytosol	15.84	28.44
TraesCS7B01G254400.1	Wheat	cytosol	14.85	28.37
TraesCS2B01G493900.1	Wheat	cytosol	15.84	28.26
TraesCS2B01G105700.1	Wheat	cytosol	15.59	28.06
TraesCS1B01G089700.1	Wheat	cytosol, plastid	33.66	27.73
TraesCS4B01G108300.1	Wheat	plastid	33.91	27.4
TraesCS2B01G480000.3	Wheat	mitochondrion	26.73	23.15
TraesCS5B01G299200.1	Wheat	mitochondrion	22.9	16.91
TraesCS7B01G174800.1	Wheat	cytosol	21.53	16.89

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.4.2.1	Gene3D:2.40.40.20	Gene3D:3.10.330.10	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:AAA_ATPase_CDC48	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:Asp_de-COase-like_dom_sf	InterPro:CDC48_domain_2-like_sf	InterPro:CDC4_N-term_subdom
InterPro:Cdc48_dom2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02359	PFAM:PF02933	ScanProsite:PS00674
PANTHER:PTHR23077	PANTHER:PTHR23077:SF122	SMART:SM00382	SMART:SM01072	SMART:SM01073	SUPFAM:SSF50692
SUPFAM:SSF52540	SUPFAM:SSF54585	TIGRFAMs:TIGR01243	EnsemblPlantsGene:TraesCS1B01G192400	EnsemblPlants:TraesCS1B01G192400.1	TIGR:cd00009
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:344367312..344372206

Molecular Weight (calculated)

89708.1 Da

IEP (calculated)

4.871

GRAVY (calculated)

-0.345

Length

808 amino acids

Sequence
(BLAST)

001: MAIHSEPSSS DASGKKDYSM AILARKKSPN RLVVDEATGD ENSAVALHPD TMDRLQLFCG DTVLLKGKKR KDTICIMLPD DTCDKTKIRM NKVVRKNLRV
101: RLGDVVSVHQ CPDVKFGNRV HILPVDDTVE GITGSMFDAF LKPYFLEAYR PVRKGDLFLV RGGMTSVEFK VIETDPAEYC IVAPDTEIFY DGEPVRREDE
201: EKLDDVGYDD VGGVRKQMAQ IRELVELPLR HPQLFKSIGV KPPKGILLYG PPGTGKTLIA RAVANETSAF FFLINGPEIM SKLAGESESN LRKAFEEAEK
301: NAPAIIFIDE IDSIAPKREK TNGEVERRIV SQLLTLMDGL KSRAHVIVMG ATNRPNSIDP ALRRFGRFDQ EIDIGVPDEV GRLEVLRIHT KNMKLAEDVE
401: LEHVSRDTHG YVGADLAALC TEAALQCIRE KMDVIDLEDD TIDAEILNSM AVTNDHFKIA LGTSNPSALR ETVVEVPNVS WEDIGGLEGV KRELQETVQY
501: PVEHPEKFEK FGMSPSKGVL FYGPPGCGKT LLAKAIANEC QANFISIKGP ELLTMWFGES EANVREIFDK ARGSAPCVLF FDELDSIATQ RGNSVGDAGG
601: AADRVLNQLL TEMDGMNAKK TVFIIGATNR PDIIDPALLR PGRLDQLIYI PLPDVESRLQ IFRACLRKSP VAKDVDLNAL AKYTQGFSGA DITEICQRAC
701: KYAIRENIEK DMEKERRRKE NPEAMEEDDV DEVAEIKAAH FEESMRYARR SVSDADIRKY QAFAQTLQQS RGFGSEFRFP DQPMAGATAA TDPFASAARA
801: AEDDDLYS

Best Arabidopsis Sequence Match ( AT5G03340.1 )
(BLAST)

001: MSNEPESSDS KTKKDFSTAI LERKKSPNRL VVDEAINDDN SVVSLHPTTM EKLQLFRGDT ILIKGKKRKD TVCIALADET CEEPKIRMNK VVRSNLRVRL
101: GDVISVHQCP DVKYGKRVHI LPVDDTVEGV TGNLFDAYLK PYFLEAYRPV RKGDLFLVRG GMRSVEFKVI ETDPAEYCVV APDTEIFCEG EPVKREDEER
201: LDEVGYDDVG GVRKQMAQIR ELVELPLRHP QLFKSIGVKP PKGILLYGPP GSGKTLIARA VANETGAFFF CINGPEIMSK LAGESESNLR KAFEEAEKNA
301: PSIIFIDEID SIAPKREKTN GEVERRIVSQ LLTLMDGLKS RAHVIVMGAT NRPNSIDPAL RRFGRFDREI DIGVPDEIGR LEVLRIHTKN MKLAEDVDLE
401: RISKDTHGYV GADLAALCTE AALQCIREKM DVIDLEDDSI DAEILNSMAV SNEHFHTALG NSNPSALRET VVEVPNVSWE DIGGLENVKR ELQETVQYPV
501: EHPEKFEKFG MSPSKGVLFY GPPGCGKTLL AKAIANECQA NFISVKGPEL LTMWFGESEA NVREIFDKAR QSAPCVLFFD ELDSIATQRG NSAGDAGGAA
601: DRVLNQLLTE MDGMNAKKTV FIIGATNRPD IIDSALLRPG RLDQLIYIPL PDEDSRLNIF KACLRKSPVA KDVDVTALAK YTQGFSGADI TEICQRACKY
701: AIRENIEKDI ENERRRSQNP EAMEEDMVDD EVSEIRAAHF EESMKYARRS VSDADIRKYQ AFAQTLQQSR GFGSEFRFDS TAGVGRTTGV AAADPFATSA
801: AAADDDDLYS

Arabidopsis Description

CDC48ECell division control protein 48 homolog E [Source:UniProtKB/Swiss-Prot;Acc:Q9LZF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.