Factsheet for HORVU0Hr1G038060.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G069560.1	Barley	cytosol	27.79	69.34
HORVU1Hr1G049910.1	Barley	cytosol	99.62	64.74
TraesCS1B01G192400.1	Wheat	cytosol	97.35	63.74
TraesCS1A01G190300.1	Wheat	cytosol	96.03	62.87
HORVU1Hr1G060370.1	Barley	cytosol	95.09	62.33
HORVU1Hr1G060340.2	Barley	cytosol	95.09	61.87
HORVU4Hr1G071960.2	Barley	cytosol	93.76	60.71
HORVU4Hr1G072010.4	Barley	cytosol	93.38	60.61
Zm00001d014124_P001	Maize	cytosol, plasma membrane	92.63	60.42
EER94171	Sorghum	cytosol	92.44	60.37
EER92840	Sorghum	cytosol	92.44	60.37
Os03t0151800-02	Rice	cytosol, extracellular, nucleus, plasma membrane, plastid	92.25	60.32
Zm00001d032859_P006	Maize	plasma membrane	92.25	60.25
HORVU0Hr1G006340.1	Barley	cytosol	85.07	57.11
HORVU3Hr1G029450.1	Barley	cytosol	85.07	55.69
HORVU3Hr1G029440.1	Barley	cytosol	85.07	55.28
GSMUA_Achr3P00260_001	Banana	cytosol	43.67	47.34
HORVU6Hr1G053620.1	Barley	cytosol	31.57	46.52
HORVU2Hr1G011690.1	Barley	cytosol	67.3	43.2
HORVU3Hr1G067470.2	Barley	cytosol	16.82	39.21
HORVU2Hr1G086170.2	Barley	cytosol	38.37	35.68
HORVU2Hr1G107280.1	Barley	cytosol	22.68	32.43
HORVU6Hr1G087650.1	Barley	cytosol, plasma membrane	22.68	31.25
HORVU6Hr1G049800.1	Barley	cytosol	3.21	30.36
HORVU6Hr1G032570.5	Barley	cytosol	23.44	30.32
HORVU7Hr1G119300.13	Barley	cytosol	22.68	29.85
HORVU6Hr1G083150.1	Barley	cytosol	23.82	29.58
HORVU2Hr1G014000.1	Barley	cytosol	22.87	29.51
HORVU7Hr1G090380.3	Barley	cytosol	23.63	28.67
HORVU0Hr1G013350.2	Barley	cytosol	16.45	28.25
HORVU7Hr1G032070.1	Barley	cytosol	23.63	28.15
HORVU7Hr1G084550.2	Barley	cytosol	21.55	26.95
HORVU2Hr1G014770.2	Barley	cytosol, plastid	21.36	25.62
HORVU7Hr1G002880.2	Barley	plastid	38.75	25.59
HORVU4Hr1G055060.1	Barley	cytosol	21.74	25.56
HORVU6Hr1G036990.7	Barley	cytosol	21.36	24.46
HORVU4Hr1G016200.10	Barley	cytosol, plastid	40.08	21.07
HORVU1Hr1G015310.16	Barley	cytosol, plastid	39.7	20.9
HORVU3Hr1G095530.3	Barley	mitochondrion, plastid	8.51	17.93
HORVU2Hr1G104530.9	Barley	cytosol	30.81	17.85
HORVU1Hr1G091080.1	Barley	mitochondrion, plastid	8.32	17.53
HORVU7Hr1G058410.7	Barley	cytosol, peroxisome	27.6	13.19
HORVU5Hr1G078590.8	Barley	plastid	27.98	13.1
HORVU3Hr1G029660.1	Barley	cytosol, peroxisome	0.57	8.82

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.4.2.1	Gene3D:3.40.50.300	UniProt:A0A287EC65	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:HORVU0Hr1G038060
EnsemblPlants:HORVU0Hr1G038060.2	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF09336	ScanProsite:PS00674	PANTHER:PTHR23077
PANTHER:PTHR23077:SF122	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000B4693DB	InterPro:Vps4_C	SEG:seg

Description

No Description!

Coordinates

chrchrUn:-:239851835..239854279

Molecular Weight (calculated)

58632.5 Da

IEP (calculated)

4.567

GRAVY (calculated)

-0.370

Length

529 amino acids

Sequence
(BLAST)

001: MSKLAGESES NLSKAFEEAE KNAPAIIFID EIDSIAPKRD KTNGEVERRI VSQLLTLMDG LKSRAHVIVM GATNRPNSID PALRRFGRFD REIDIGVPDE
101: VGRLEVLRIH TKNMKLAEDV ELEHVSRDTH GYVGADLAAL CTEAALQCIR EKMDVIDLED DTIDAEILNS MAVTNDHFNI ALGTSNPSAL RETVVEVPNV
201: SWEDIGGLET VKKELQETVQ YPVEHPEKFE KFGMSPSKGV LFYGPPGCGK TLLAKAIANE CQANFISIKG PELLTMWFGE SEANVREIFD KARGSAPCVL
301: FFDELDSIAT QRGNSVGDAG GAADRVLNQL LTEMDGMNAK KTVFIIGATN RPDIIDPALL RPGRLDQLIY IPLPDVESRL QIFRACLRKS PVAKDVDLNA
401: LAKYTQGFSG ADITEICQRA CKYAIRENIE KDMEKERRRK ENPEAMEEDE MDEIAEIKAS HFEESMRYAR RSVSDADIRK YQAFAQTLQQ SRGFGSQFRF
501: PDQPVAGATT ATDPFASAAV AAEDDDLYS

Best Arabidopsis Sequence Match ( AT3G01610.1 )
(BLAST)

001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE

Arabidopsis Description

CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.