Factsheet for HORVU7Hr1G084550.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G036810.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G19990.1	HORVU6Hr1G036810.5	AT5G19960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G350300.1	Wheat	cytosol	100.0	100.0
TraesCS7B01G254400.1	Wheat	cytosol	100.0	100.0
TraesCS7A01G372600.1	Wheat	cytosol	100.0	100.0
EES06492	Sorghum	cytosol	95.51	95.73
GSMUA_Achr10P...	Banana	cytosol	91.49	92.14
AT5G19990.1	Thale cress	cytosol	91.25	92.12
CDX70903	Canola	cytosol	90.54	92.07
CDY35832	Canola	cytosol	91.02	91.89
VIT_09s0002g05800.t01	Wine grape	cytosol	90.54	91.85
Solyc05g018590.2.1	Tomato	nucleus	90.54	91.85
Solyc05g018570.2.1	Tomato	cytosol, extracellular, nucleus, plastid	90.31	91.61
Bra002279.1-P	Field mustard	cytosol	90.54	91.41
VIT_04s0008g04690.t01	Wine grape	cytosol	90.54	91.19
Bra006529.1-P	Field mustard	cytosol	90.31	91.17
AT5G20000.1	Thale cress	cytosol	89.6	90.45
KRH44668	Soybean	cytosol, mitochondrion, nucleus	89.36	90.43
KRH46990	Soybean	nucleus	89.36	90.43
HORVU6Hr1G036990.7	Barley	cytosol	94.33	86.36
PGSC0003DMT400038718	Potato	cytosol	80.14	78.29
CDX88865	Canola	cytosol, extracellular	86.52	58.19
CDY42324	Canola	cytosol, extracellular	90.54	53.42
CDY44958	Canola	cytosol, plasma membrane	90.78	53.26
Bra020079.1-P	Field mustard	cytosol	90.54	53.12
HORVU3Hr1G067470.2	Barley	cytosol	26.95	50.22
HORVU6Hr1G083150.1	Barley	cytosol	46.34	46.01
HORVU7Hr1G032070.1	Barley	cytosol	45.86	43.69
HORVU6Hr1G087650.1	Barley	cytosol, plasma membrane	38.77	42.71
HORVU6Hr1G032570.5	Barley	cytosol	40.43	41.81
HORVU7Hr1G119300.13	Barley	cytosol	39.48	41.54
HORVU2Hr1G107280.1	Barley	cytosol	36.17	41.35
HORVU7Hr1G090380.3	Barley	cytosol	40.43	39.22
HORVU4Hr1G055060.1	Barley	cytosol	41.61	39.11
HORVU2Hr1G014770.2	Barley	cytosol, plastid	40.43	38.78
HORVU2Hr1G014000.1	Barley	cytosol	37.12	38.29
HORVU6Hr1G049800.1	Barley	cytosol	4.02	30.36
HORVU3Hr1G095530.3	Barley	mitochondrion, plastid	15.37	25.9
HORVU1Hr1G091080.1	Barley	mitochondrion, plastid	15.13	25.5
HORVU2Hr1G086170.2	Barley	cytosol	29.55	21.97
HORVU0Hr1G038060.2	Barley	cytosol	26.95	21.55
HORVU0Hr1G013350.2	Barley	cytosol	13.24	18.18
HORVU7Hr1G002880.2	Barley	plastid	30.5	16.1
HORVU4Hr1G072010.4	Barley	cytosol	29.79	15.46
HORVU4Hr1G071960.2	Barley	cytosol	29.55	15.3
HORVU0Hr1G006340.1	Barley	cytosol	27.9	14.97
HORVU1Hr1G060370.1	Barley	cytosol	28.37	14.87
HORVU1Hr1G049910.1	Barley	cytosol	28.61	14.86
HORVU1Hr1G060340.2	Barley	cytosol	28.37	14.76
HORVU2Hr1G011690.1	Barley	cytosol	28.61	14.68
HORVU3Hr1G029450.1	Barley	cytosol	27.9	14.6
HORVU3Hr1G029440.1	Barley	cytosol	27.9	14.5
HORVU2Hr1G104530.9	Barley	cytosol	26.71	12.38
HORVU1Hr1G015310.16	Barley	cytosol, plastid	27.9	11.74
HORVU4Hr1G016200.10	Barley	cytosol, plastid	27.66	11.63
HORVU5Hr1G069560.1	Barley	cytosol	5.2	10.38
HORVU7Hr1G058410.7	Barley	cytosol, peroxisome	26.48	10.12
HORVU5Hr1G078590.8	Barley	plastid	25.3	9.47
HORVU6Hr1G053620.1	Barley	cytosol	6.15	7.24
HORVU3Hr1G029660.1	Barley	cytosol, peroxisome	0.0	0.0
Bra006530.1-P	Field mustard	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.6.2.1.6	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
EMBL:AK361490	EMBL:AK368658	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ncoils:Coil	UniProt:F2DC74
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	GO:GO:0036402	GO:GO:1901800
EnsemblPlantsGene:HORVU7Hr1G084550	EnsemblPlants:HORVU7Hr1G084550.2	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23073
PANTHER:PTHR23073:SF57	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR01242	UniParc:UPI0002005D4B	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DC74]

Coordinates

chrchr7H:-:509148128..509152081

Molecular Weight (calculated)

47123.6 Da

IEP (calculated)

9.507

GRAVY (calculated)

-0.309

Length

423 amino acids

Sequence
(BLAST)

001: MAAVAMDIAK PSALPASVDD PSAASAKGRA GGGEGLRQYY LQHIHDLQLQ IRTKTHNLNR LEAQRNDLNS RVRMLREELQ LLQEPGSYVG EVVKVMGKSK
101: VLVKVHPEGK YVVDLDKSID ITKITPSTRV ALRNDSYMLH LILPSKVDPL VNLMKVEKVP DSTYDMIGGL DQQIKEIKEV IELPIKHPEL FESLGIAQPK
201: GVLLYGPPGT GKTLLARAVA HHTDCTFIRV SGSELVQKYI GEGSRMVREL FVMAREHAPS IIFMDEIDSI GSARMESGSG NGDSEVQRTM LELLNQLDGF
301: EASNKIKVLM ATNRIDILDQ ALLRPGRIDR KIEFPNPNAD SRGDILKIHS RKMNLMRGID LKKIAEKMNG ASGAELKAVC TEAGMFALRE RRVHVTQEDF
401: EMAVAKVMKK DTEKNMSLRK LWK

Best Arabidopsis Sequence Match ( AT5G19990.1 )
(BLAST)

001: MAAVGVDSRR PETAMEETCN VKGAAAKQGE GLKQYYLQHI HELQRQLRQK TNNLNRLEAQ RNELNSRVRM LREELQLLQE PGSYVGEVVK VMGKNKVLVK
101: VHPEGKYVVD IDKSIDITKI TPSTRVALRN DSYVLHLVLP SKVDPLVNLM KVEKVPDSTY DMIGGLDQQI KEIKEVIELP IKHPELFESL GIAQPKGVLL
201: YGPPGTGKTL LARAVAHHTD CTFIRVSGSE LVQKYIGEGS RMVRELFVMA REHAPSIIFM DEIDSIGSAR MESGSGNGDS EVQRTMLELL NQLDGFEASN
301: KIKVLMATNR IDILDQALLR PGRIDRKIEF PNPNEESRFD ILKIHSRKMN LMRGIDLKKI AEKMNGASGA ELKAVCTEAG MFALRERRVH VTQEDFEMAV
401: AKVMKKDTEK NMSLRKLWK

Arabidopsis Description

RPT6A26S proteasome regulatory subunit 8 homolog A [Source:UniProtKB/Swiss-Prot;Acc:Q9C5U3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.