Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||
---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7A01G156800.1 | Wheat | cytosol | 94.82 | 98.83 |
TraesCS7B01G060900.1 | Wheat | golgi | 94.82 | 98.83 |
TraesCS7D01G157200.1 | Wheat | cytosol | 94.82 | 98.83 |
Os06t0192600-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 94.37 | 98.36 |
Zm00001d018309_P003 | Maize | cytosol | 94.37 | 98.36 |
EES01223 | Sorghum | cytosol | 94.14 | 98.12 |
Bra005023.1-P | Field mustard | cytosol | 52.7 | 97.91 |
GSMUA_AchrUn_... | Banana | cytosol | 92.79 | 96.94 |
GSMUA_Achr8P16830_001 | Banana | cytosol | 92.57 | 96.71 |
HORVU6Hr1G083150.1 | Barley | cytosol | 92.57 | 96.48 |
PGSC0003DMT400023656 | Potato | cytosol | 92.57 | 96.03 |
Solyc03g123730.2.1 | Tomato | nucleus | 92.57 | 96.03 |
CDY36602 | Canola | cytosol | 92.12 | 96.01 |
KRH69005 | Soybean | nucleus | 92.12 | 96.01 |
VIT_09s0002g00170.t01 | Wine grape | cytosol | 92.12 | 96.01 |
CDY24076 | Canola | cytosol | 92.12 | 96.01 |
CDY30665 | Canola | cytosol | 91.89 | 95.77 |
Bra039688.1-P | Field mustard | cytosol | 91.89 | 95.77 |
AT1G53750.1 | Thale cress | cytosol | 91.89 | 95.77 |
PGSC0003DMT400012446 | Potato | cytosol | 92.12 | 95.34 |
CDY25685 | Canola | cytosol | 90.99 | 94.84 |
CDY02494 | Canola | cytosol | 90.99 | 94.84 |
Bra030922.1-P | Field mustard | cytosol | 90.99 | 94.84 |
CDX74842 | Canola | cytosol | 87.39 | 94.17 |
CDY20470 | Canola | cytosol, plasma membrane | 90.32 | 94.13 |
Bra040569.1-P | Field mustard | cytosol | 90.09 | 92.38 |
CDY08201 | Canola | cytosol | 72.3 | 90.42 |
CDY30663 | Canola | cytosol | 74.1 | 76.16 |
AT1G53780.2 | Thale cress | cytosol | 79.28 | 56.77 |
HORVU3Hr1G067470.2 | Barley | cytosol | 25.9 | 50.66 |
HORVU7Hr1G084550.2 | Barley | cytosol | 43.69 | 45.86 |
HORVU6Hr1G087650.1 | Barley | cytosol, plasma membrane | 36.49 | 42.19 |
HORVU6Hr1G036990.7 | Barley | cytosol | 43.47 | 41.77 |
HORVU6Hr1G032570.5 | Barley | cytosol | 37.39 | 40.59 |
HORVU2Hr1G107280.1 | Barley | cytosol | 33.33 | 40.0 |
HORVU7Hr1G119300.13 | Barley | cytosol | 35.81 | 39.55 |
HORVU7Hr1G090380.3 | Barley | cytosol | 37.84 | 38.53 |
HORVU2Hr1G014000.1 | Barley | cytosol | 34.91 | 37.8 |
HORVU4Hr1G055060.1 | Barley | cytosol | 37.39 | 36.89 |
HORVU2Hr1G014770.2 | Barley | cytosol, plastid | 36.26 | 36.51 |
HORVU6Hr1G049800.1 | Barley | cytosol | 4.5 | 35.71 |
HORVU0Hr1G038060.2 | Barley | cytosol | 28.15 | 23.63 |
HORVU3Hr1G095530.3 | Barley | mitochondrion, plastid | 13.06 | 23.11 |
HORVU1Hr1G091080.1 | Barley | mitochondrion, plastid | 12.84 | 22.71 |
HORVU2Hr1G086170.2 | Barley | cytosol | 28.15 | 21.97 |
HORVU0Hr1G006340.1 | Barley | cytosol | 31.53 | 17.77 |
HORVU3Hr1G029450.1 | Barley | cytosol | 31.53 | 17.33 |
HORVU3Hr1G029440.1 | Barley | cytosol | 31.53 | 17.2 |
HORVU4Hr1G072010.4 | Barley | cytosol | 31.31 | 17.06 |
HORVU4Hr1G071960.2 | Barley | cytosol | 31.08 | 16.89 |
HORVU1Hr1G060370.1 | Barley | cytosol | 30.41 | 16.73 |
HORVU1Hr1G049910.1 | Barley | cytosol | 30.63 | 16.71 |
HORVU2Hr1G011690.1 | Barley | cytosol | 30.86 | 16.63 |
HORVU1Hr1G060340.2 | Barley | cytosol | 30.41 | 16.61 |
HORVU0Hr1G013350.2 | Barley | cytosol | 11.04 | 15.91 |
HORVU7Hr1G002880.2 | Barley | plastid | 28.15 | 15.61 |
HORVU5Hr1G069560.1 | Barley | cytosol | 6.53 | 13.68 |
HORVU4Hr1G016200.10 | Barley | cytosol, plastid | 28.83 | 12.72 |
HORVU1Hr1G015310.16 | Barley | cytosol, plastid | 28.6 | 12.64 |
HORVU2Hr1G104530.9 | Barley | cytosol | 25.68 | 12.49 |
HORVU6Hr1G053620.1 | Barley | cytosol | 9.46 | 11.7 |
HORVU7Hr1G058410.7 | Barley | cytosol, peroxisome | 22.52 | 9.03 |
HORVU3Hr1G029660.1 | Barley | cytosol, peroxisome | 0.68 | 8.82 |
HORVU5Hr1G078590.8 | Barley | plastid | 21.85 | 8.58 |
Protein Annotations
Gene3D:1.10.8.60 | MapMan:19.2.6.2.1.1 | Gene3D:2.40.50.140 | InterPro:26S_Psome_P45-like | Gene3D:3.40.50.300 | UniProt:A0A287VYF4 |
InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030163 |
EnsemblPlantsGene:HORVU7Hr1G032070 | EnsemblPlants:HORVU7Hr1G032070.1 | InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | PANTHER:PTHR23073 |
PANTHER:PTHR23073:SF60 | SMART:SM00382 | SUPFAM:SSF52540 | TIGRFAMs:TIGR01242 | UniParc:UPI000B47FB90 | SEG:seg |
Description
No Description!
Coordinates
chrchr7H:-:65632288..65636380
Molecular Weight (calculated)
48816.1 Da
IEP (calculated)
6.058
GRAVY (calculated)
-0.380
Length
444 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXPPPLAVA GGGTGANAMA PEPEDDLMSE KNPRPLDEDD IALLKTYGLG PYSNSIKKVE KDIKEMAKKI NDLCGIKESD TGLAPPSQWD LVSDKQMMQE
101: EQPLQVARCT KIISPNTDDA KYVINVKQIA KFVVGLGDKV SPTDIEEGMR VGVDRNKYQI QIPLPPKIDP SVTMMTVEEK PDVTYNDVGG CKDQIEKMRE
201: VVELPMLHPE KFVKLGIDPP KGVLCYGPPG TGKTLLARAV ANRTDACFIR VIGSELVQKY VGEGARMVRE LFQMARSKKA CIVFFDEVDA IGGARFDDGA
301: GGDNEVQRTM LEIVNQLDGF DARGNIKVLM ATNRPDTLDP ALLRPGRLDR KVEFGLPDLE GRTQIFKIHT RAMNCERDIR FELLARLCPN STGADIRSVC
401: TEAGMYAIRA RRKTVTEKDF LDAVNKVIKG YQKFSATPKY MVYN
101: EQPLQVARCT KIISPNTDDA KYVINVKQIA KFVVGLGDKV SPTDIEEGMR VGVDRNKYQI QIPLPPKIDP SVTMMTVEEK PDVTYNDVGG CKDQIEKMRE
201: VVELPMLHPE KFVKLGIDPP KGVLCYGPPG TGKTLLARAV ANRTDACFIR VIGSELVQKY VGEGARMVRE LFQMARSKKA CIVFFDEVDA IGGARFDDGA
301: GGDNEVQRTM LEIVNQLDGF DARGNIKVLM ATNRPDTLDP ALLRPGRLDR KVEFGLPDLE GRTQIFKIHT RAMNCERDIR FELLARLCPN STGADIRSVC
401: TEAGMYAIRA RRKTVTEKDF LDAVNKVIKG YQKFSATPKY MVYN
001: MVRDIEDEIR DEKNPRPLDE DDIALLKTYG LGPYSAPIKK VEKEIKDLAK KINDLCGIKE SDTGLAPPSQ WDLVSDKQMM QEEQPLQVAR CTKIISPNTE
101: DAKYVINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIVFFDEV DAIGGARFDD GVGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LESRTQIFKI HTRTMNCERD IRFELLARLC PNSTGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDAVNKVI KGYQKFSATP KYMVYN
101: DAKYVINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIVFFDEV DAIGGARFDD GVGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LESRTQIFKI HTRTMNCERD IRFELLARLC PNSTGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDAVNKVI KGYQKFSATP KYMVYN
Arabidopsis Description
RPT1ARPT1A [Source:UniProtKB/TrEMBL;Acc:A0A178W3N8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.