Factsheet for HORVU3Hr1G029660.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G053620.1	Barley	cytosol	70.59	6.69
HORVU0Hr1G006340.1	Barley	cytosol	100.0	4.31
HORVU3Hr1G029450.1	Barley	cytosol	100.0	4.21
HORVU3Hr1G029440.1	Barley	cytosol	100.0	4.18
HORVU4Hr1G072010.4	Barley	cytosol	97.06	4.05
HORVU4Hr1G071960.2	Barley	cytosol	97.06	4.04
HORVU1Hr1G060370.1	Barley	cytosol	94.12	3.97
HORVU1Hr1G060340.2	Barley	cytosol	94.12	3.94
HORVU1Hr1G049910.1	Barley	cytosol	94.12	3.93
HORVU2Hr1G011690.1	Barley	cytosol	73.53	3.03
CDY18139	Canola	extracellular, vacuole	23.53	2.64
HORVU7Hr1G002880.2	Barley	plastid	55.88	2.37
HORVU2Hr1G086170.2	Barley	cytosol	35.29	2.11
HORVU1Hr1G015310.16	Barley	cytosol, plastid	55.88	1.89
HORVU4Hr1G016200.10	Barley	cytosol, plastid	55.88	1.89
HORVU2Hr1G104530.9	Barley	cytosol	32.35	1.2
Zm00001d033491_P001	Maize	cytosol, plasma membrane, plastid	8.82	1.19
HORVU5Hr1G078590.8	Barley	plastid	38.24	1.15
HORVU7Hr1G058410.7	Barley	cytosol, peroxisome	35.29	1.08
HORVU3Hr1G095530.3	Barley	mitochondrion, plastid	5.88	0.8
HORVU1Hr1G091080.1	Barley	mitochondrion, plastid	5.88	0.8
HORVU7Hr1G119300.13	Barley	cytosol	8.82	0.75
HORVU6Hr1G032570.5	Barley	cytosol	8.82	0.73
HORVU7Hr1G090380.3	Barley	cytosol	8.82	0.69
HORVU7Hr1G032070.1	Barley	cytosol	8.82	0.68
HORVU0Hr1G038060.2	Barley	cytosol	8.82	0.57
HORVU6Hr1G083150.1	Barley	cytosol	5.88	0.47
HORVU2Hr1G014770.2	Barley	cytosol, plastid	5.88	0.45
HORVU4Hr1G055060.1	Barley	cytosol	5.88	0.44
HORVU6Hr1G087650.1	Barley	cytosol, plasma membrane	2.94	0.26
HORVU2Hr1G014000.1	Barley	cytosol	2.94	0.24
Os08t0556550-01	Rice	cytosol	0.0	0.0
CDY69655	Canola	cytosol, nucleus	0.0	0.0
Os08t0556400-01	Rice	endoplasmic reticulum, golgi, plasma membrane	0.0	0.0
HORVU2Hr1G107280.1	Barley	cytosol	0.0	0.0
HORVU7Hr1G084550.2	Barley	cytosol	0.0	0.0
HORVU0Hr1G013350.2	Barley	cytosol	0.0	0.0
HORVU6Hr1G049800.1	Barley	cytosol	0.0	0.0
HORVU6Hr1G036990.7	Barley	cytosol	0.0	0.0
HORVU5Hr1G069560.1	Barley	cytosol	0.0	0.0
HORVU3Hr1G067470.2	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU3Hr1G029660.1	EnsemblPlantsGene:HORVU3Hr1G029660	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase	PANTHER:PTHR23077	PANTHER:PTHR23077:SF92	PFAM:PF00004
SUPFAM:SSF52540	UniParc:UPI000B47407E	UniProt:A0A287KKV1	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr3H:+:138335699..138335802

Molecular Weight (calculated)

3523.3 Da

IEP (calculated)

9.535

GRAVY (calculated)

0.253

Length

34 amino acids

Sequence
(BLAST)

1: GPPGSGKTLI ARAVANETGA FFFLINGPEI MSKM

Best Arabidopsis Sequence Match ( AT5G03340.1 )
(BLAST)

001: MSNEPESSDS KTKKDFSTAI LERKKSPNRL VVDEAINDDN SVVSLHPTTM EKLQLFRGDT ILIKGKKRKD TVCIALADET CEEPKIRMNK VVRSNLRVRL
101: GDVISVHQCP DVKYGKRVHI LPVDDTVEGV TGNLFDAYLK PYFLEAYRPV RKGDLFLVRG GMRSVEFKVI ETDPAEYCVV APDTEIFCEG EPVKREDEER
201: LDEVGYDDVG GVRKQMAQIR ELVELPLRHP QLFKSIGVKP PKGILLYGPP GSGKTLIARA VANETGAFFF CINGPEIMSK LAGESESNLR KAFEEAEKNA
301: PSIIFIDEID SIAPKREKTN GEVERRIVSQ LLTLMDGLKS RAHVIVMGAT NRPNSIDPAL RRFGRFDREI DIGVPDEIGR LEVLRIHTKN MKLAEDVDLE
401: RISKDTHGYV GADLAALCTE AALQCIREKM DVIDLEDDSI DAEILNSMAV SNEHFHTALG NSNPSALRET VVEVPNVSWE DIGGLENVKR ELQETVQYPV
501: EHPEKFEKFG MSPSKGVLFY GPPGCGKTLL AKAIANECQA NFISVKGPEL LTMWFGESEA NVREIFDKAR QSAPCVLFFD ELDSIATQRG NSAGDAGGAA
601: DRVLNQLLTE MDGMNAKKTV FIIGATNRPD IIDSALLRPG RLDQLIYIPL PDEDSRLNIF KACLRKSPVA KDVDVTALAK YTQGFSGADI TEICQRACKY
701: AIRENIEKDI ENERRRSQNP EAMEEDMVDD EVSEIRAAHF EESMKYARRS VSDADIRKYQ AFAQTLQQSR GFGSEFRFDS TAGVGRTTGV AAADPFATSA
801: AAADDDDLYS

Arabidopsis Description

CDC48ECell division control protein 48 homolog E [Source:UniProtKB/Swiss-Prot;Acc:Q9LZF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.