Factsheet for HORVU2Hr1G014000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G107280.1	Barley	cytosol	88.54	98.11
TraesCS2D01G083900.1	Wheat	golgi	99.27	98.07
TraesCS2A01G086400.1	Wheat	cytosol	99.27	98.07
TraesCS2B01G100400.1	Wheat	cytosol, plastid	99.27	98.07
GSMUA_Achr6P12250_001	Banana	cytosol	70.98	96.04
PGSC0003DMT400006190	Potato	cytosol	75.85	95.4
KXG39890	Sorghum	cytosol	96.1	93.81
HORVU3Hr1G067470.2	Barley	cytosol	50.98	92.07
CDY43865	Canola	cytosol	88.78	90.1
CDY58566	Canola	cytosol	88.78	90.1
CDY32995	Canola	cytosol, extracellular	88.78	90.1
CDY32714	Canola	cytosol	88.78	90.1
CDY02806	Canola	cytosol	88.78	90.1
CDX88666	Canola	cytosol	88.78	90.1
Bra020378.1-P	Field mustard	cytosol	88.78	90.1
Bra002662.1-P	Field mustard	cytosol	88.78	90.1
Zm00001d050616_P002	Maize	plastid	95.37	90.09
Bra006775.1-P	Field mustard	cytosol	85.37	89.51
AT5G58290.1	Thale cress	cytosol	89.02	89.46
VIT_06s0004g08220.t01	Wine grape	cytosol	90.98	89.23
Solyc06g082660.2.1	Tomato	cytosol, nucleus	90.0	89.13
Solyc06g082630.2.1	Tomato	cytosol, plastid	89.76	88.89
KRH30674	Soybean	cytosol, nucleus	89.02	88.38
KRG98107	Soybean	cytosol	90.73	88.15
KRH30673	Soybean	cytosol, nucleus	90.0	87.23
Zm00001d015886_P002	Maize	cytosol	83.66	63.28
HORVU2Hr1G014770.2	Barley	cytosol, plastid	45.37	42.18
HORVU7Hr1G119300.13	Barley	cytosol	40.98	41.79
HORVU4Hr1G055060.1	Barley	cytosol	45.61	41.56
HORVU6Hr1G087650.1	Barley	cytosol, plasma membrane	37.32	39.84
HORVU6Hr1G032570.5	Barley	cytosol	38.29	38.39
HORVU7Hr1G090380.3	Barley	cytosol	39.76	37.39
HORVU7Hr1G084550.2	Barley	cytosol	38.29	37.12
HORVU6Hr1G083150.1	Barley	cytosol	38.05	36.62
HORVU7Hr1G032070.1	Barley	cytosol	37.8	34.91
HORVU6Hr1G036990.7	Barley	cytosol	38.54	34.2
HORVU1Hr1G091080.1	Barley	mitochondrion, plastid	19.02	31.08
HORVU3Hr1G095530.3	Barley	mitochondrion, plastid	18.78	30.68
HORVU6Hr1G049800.1	Barley	cytosol	4.15	30.36
HORVU0Hr1G038060.2	Barley	cytosol	29.51	22.87
HORVU2Hr1G086170.2	Barley	cytosol	29.76	21.44
HORVU0Hr1G013350.2	Barley	cytosol	12.93	17.21
HORVU0Hr1G006340.1	Barley	cytosol	31.22	16.24
HORVU2Hr1G011690.1	Barley	cytosol	32.44	16.14
HORVU1Hr1G060370.1	Barley	cytosol	31.46	15.99
HORVU1Hr1G049910.1	Barley	cytosol	31.71	15.97
HORVU4Hr1G072010.4	Barley	cytosol	31.71	15.95
HORVU1Hr1G060340.2	Barley	cytosol	31.46	15.87
HORVU3Hr1G029450.1	Barley	cytosol	31.22	15.84
HORVU4Hr1G071960.2	Barley	cytosol	31.46	15.79
HORVU3Hr1G029440.1	Barley	cytosol	31.22	15.72
HORVU7Hr1G002880.2	Barley	plastid	30.49	15.61
HORVU2Hr1G104530.9	Barley	cytosol	27.07	12.16
HORVU1Hr1G015310.16	Barley	cytosol, plastid	28.78	11.74
HORVU4Hr1G016200.10	Barley	cytosol, plastid	27.8	11.33
HORVU5Hr1G069560.1	Barley	cytosol	5.85	11.32
HORVU5Hr1G078590.8	Barley	plastid	25.12	9.12
HORVU7Hr1G058410.7	Barley	cytosol, peroxisome	24.15	8.94
HORVU6Hr1G053620.1	Barley	cytosol	7.07	8.08
HORVU3Hr1G029660.1	Barley	cytosol, peroxisome	0.24	2.94

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.6.2.1.3	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
EMBL:AK357578	EMBL:AK376837	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ncoils:Coil	UniProt:F2D121
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	GO:GO:0036402	GO:GO:1901800
EnsemblPlantsGene:HORVU2Hr1G014000	EnsemblPlants:HORVU2Hr1G014000.1	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	InterPro:PSMC4
PANTHER:PTHR23073	PANTHER:PTHR23073:SF8	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR01242	UniParc:UPI00020050AC
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D121]

Coordinates

chrchr2H:-:30515468..30520134

Molecular Weight (calculated)

45687.8 Da

IEP (calculated)

5.929

GRAVY (calculated)

-0.343

Length

410 amino acids

Sequence
(BLAST)

001: MSAAAVAPSP PAAPPSYPAA PSAPSAEDDD DLYGRLKSLQ RHMEFVEIQE EYVKDEQKNL KRELLRAQEE VKRIQSVPLV IGQFMEMVDG NNGIVGSTTG
101: SNYYVRILST INRELLKPSA SVALHRHSNA LVDVLPPEAD SSISLLASSE KPNVLYSDIG GCDIQKQEIR EAVELPLTHH ELYKQIGIDP PRGVLLYGPP
201: GTGKTMLAKA VAHHTTAAFI RVVGSEFVQK YLGEGPRMVR DVFRLAKENA PAIIFIDEVD AIATARFDAQ TGADREVQRI LMELLNQMDG FDQTVNVKVI
301: MATNRADTLD PALLRPGRLD RKIEFPLPDR RQKRLVFQVC TAKMNLSDEV DLEDYVSRPD KISAADITAI CQEAGMHAVR KNRYVILPKD FEKGYRTNVK
401: KPESDFDFYK

Best Arabidopsis Sequence Match ( AT5G58290.1 )
(BLAST)

001: MASAAVASMV LDPKASPALM DLSTADEEDL YGRLKSLERQ LEFTDIQEEY VKDEQKNLKR ELLRAQEEVK RIQSVPLVIG QFMEMVDQNN GIVGSTTGSN
101: YYVRILSTIN RELLKPSASV ALHRHSNALV DVLPPEADSS ISLLSQSEKP DVSYNDIGGC DIQKQEIREA VELPLTHHEL YKQIGIDPPR GVLLYGPPGT
201: GKTMLAKAVA NHTTAAFIRV VGSEFVQKYL GEGPRMVRDV FRLAKENAPA IIFIDEVDAI ATARFDAQTG ADREVQRILM ELLNQMDGFD QTVNVKVIMA
301: TNRADTLDPA LLRPGRLDRK IEFPLPDRRQ KRLVFQVCTS KMNLSDEVDL EDYVSRPDKI SAAEIAAICQ EAGMHAVRKN RYVILPKDFE KGYRANVKKP
401: DTDFEFYK

Arabidopsis Description

RPT3RPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UAH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.