Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G086400.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS2B01G100400.1 | Wheat | cytosol, plastid | 99.52 | 99.52 |
| HORVU2Hr1G014000.1 | Barley | cytosol | 98.07 | 99.27 |
| GSMUA_Achr6P12250_001 | Banana | cytosol | 70.36 | 96.37 |
| TraesCS2D01G476000.1 | Wheat | cytosol | 96.63 | 96.16 |
| PGSC0003DMT400006190 | Potato | cytosol | 75.18 | 95.71 |
| Os02t0325100-01 | Rice | plastid | 96.39 | 95.47 |
| KXG39890 | Sorghum | cytosol | 95.66 | 94.52 |
| CDX88666 | Canola | cytosol | 88.43 | 90.84 |
| CDY43865 | Canola | cytosol | 88.43 | 90.84 |
| CDY58566 | Canola | cytosol | 88.43 | 90.84 |
| Zm00001d050616_P002 | Maize | plastid | 94.94 | 90.78 |
| Bra002662.1-P | Field mustard | cytosol | 88.19 | 90.59 |
| CDY32995 | Canola | cytosol, extracellular | 88.19 | 90.59 |
| CDY32714 | Canola | cytosol | 87.95 | 90.35 |
| Bra020378.1-P | Field mustard | cytosol | 87.95 | 90.35 |
| CDY02806 | Canola | cytosol | 87.95 | 90.35 |
| Bra006775.1-P | Field mustard | cytosol | 85.06 | 90.28 |
| AT5G58290.1 | Thale cress | cytosol | 88.43 | 89.95 |
| VIT_06s0004g08220.t01 | Wine grape | cytosol | 90.36 | 89.71 |
| Solyc06g082660.2.1 | Tomato | cytosol, nucleus | 89.16 | 89.37 |
| Solyc06g082630.2.1 | Tomato | cytosol, plastid | 88.92 | 89.13 |
| KRH30674 | Soybean | cytosol, nucleus | 88.19 | 88.62 |
| KRG98107 | Soybean | cytosol | 89.88 | 88.39 |
| KRH30673 | Soybean | cytosol, nucleus | 89.4 | 87.71 |
| Zm00001d015886_P002 | Maize | cytosol | 83.37 | 63.84 |
| TraesCS2D01G471200.1 | Wheat | cytosol | 52.29 | 47.9 |
| TraesCS2D01G087900.1 | Wheat | cytosol, golgi | 45.78 | 42.32 |
| TraesCS6D01G149500.1 | Wheat | cytosol | 36.39 | 41.94 |
| TraesCS7D01G532000.1 | Wheat | cytosol | 40.0 | 41.71 |
| TraesCS4D01G190600.1 | Wheat | cytosol, golgi | 45.06 | 41.56 |
| TraesCS7D01G375500.1 | Wheat | cytosol | 39.04 | 40.5 |
| TraesCS6D01G166700.1 | Wheat | cytosol, golgi | 38.07 | 37.8 |
| TraesCS7D01G350300.1 | Wheat | cytosol | 37.83 | 37.12 |
| TraesCS3D01G417000.1 | Wheat | cytosol | 38.55 | 36.87 |
| TraesCS7D01G134800.1 | Wheat | cytosol | 38.07 | 36.83 |
| TraesCS6D01G326400.1 | Wheat | cytosol | 37.59 | 36.62 |
| TraesCS7D01G157200.1 | Wheat | cytosol | 37.35 | 36.38 |
| TraesCS1D01G340100.1 | Wheat | cytosol | 20.96 | 33.98 |
| TraesCS1D01G194500.1 | Wheat | cytosol | 21.69 | 33.96 |
| TraesCS3D01G153300.1 | Wheat | cytosol | 17.83 | 33.04 |
| TraesCS2D01G353100.1 | Wheat | cytosol | 29.4 | 21.48 |
| TraesCS3D01G153800.1 | Wheat | cytosol | 28.67 | 17.5 |
| TraesCS3D01G154000.1 | Wheat | cytosol | 31.08 | 16.37 |
| TraesCS1D01G399100.1 | Wheat | cytosol | 30.84 | 16.22 |
| TraesCS1D01G248000.1 | Wheat | cytosol | 30.6 | 16.1 |
| TraesCS3D01G443600.1 | Wheat | mitochondrion | 28.92 | 16.04 |
| TraesCS5D01G081900.1 | Wheat | mitochondrion | 28.67 | 16.02 |
| TraesCS1D01G253100.1 | Wheat | cytosol | 30.84 | 16.0 |
| TraesCS1D01G223800.1 | Wheat | cytosol | 30.6 | 15.88 |
| TraesCS4D01G267800.1 | Wheat | cytosol | 31.08 | 15.87 |
| TraesCS3D01G153900.1 | Wheat | cytosol | 29.88 | 15.74 |
| TraesCS7D01G023600.1 | Wheat | mitochondrion | 29.64 | 15.67 |
| TraesCS4D01G267600.2 | Wheat | cytosol | 30.84 | 15.65 |
| TraesCS6D01G360700.1 | Wheat | cytosol | 26.27 | 14.81 |
| TraesCS2D01G458300.3 | Wheat | mitochondrion | 26.51 | 11.79 |
| TraesCS1D01G073600.1 | Wheat | cytosol, plastid | 27.95 | 11.54 |
| TraesCS4D01G105500.2 | Wheat | cytosol, plastid | 27.23 | 11.23 |
| TraesCS5D01G306600.2 | Wheat | mitochondrion | 25.78 | 9.78 |
| TraesCS7D01G277100.1 | Wheat | cytosol, peroxisome, plastid | 24.1 | 9.17 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:19.2.6.2.1.3 | Gene3D:2.40.50.140 | InterPro:26S_Psome_P45-like | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0030163 | GO:GO:0036402 | InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | InterPro:PSMC4 |
| PANTHER:PTHR23073 | PANTHER:PTHR23073:SF8 | SMART:SM00382 | SUPFAM:SSF52540 | TIGRFAMs:TIGR01242 | EnsemblPlantsGene:TraesCS2D01G083900 |
| EnsemblPlants:TraesCS2D01G083900.1 | TIGR:cd00009 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2D:+:36279518..36283891
Molecular Weight (calculated)
46203.4 Da
IEP (calculated)
5.929
GRAVY (calculated)
-0.345
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAAAVAPSP PAPLPSAPPP SYPAAPPAPS AEDDDDLYGR LKSLQRHMEF VEIQEEYVKD EQKNLKRELL RAQEEVKRIQ SVPLVIGQFM EMVDGNNGIV
101: GSTTGSNYYV RILSTINREL LKPSASVALH RHSNALVDVL PPEADSSISL LASSEKPNVL YSDIGGCDIQ KQEIREAVEL PLTHHELYKQ IGIDPPRGVL
201: LYGPPGTGKT MLAKAVAHHT TAAFIRVVGS EFVQKYLGEG PRMVRDVFRL AKENAPAIIF IDEVDAIATA RFDAQTGADR EVQRILMELL NQMDGFDQTV
301: NVKVIMATNR ADTLDPALLR PGRLDRKIEF PLPDRRQKRL VFQVCTAKMN LSDEVDLEDY VSRPDKISAA DITAICQEAG MHAVRKNRYV ILPKDFEKGY
401: RTNVKKPETD FDFYK
101: GSTTGSNYYV RILSTINREL LKPSASVALH RHSNALVDVL PPEADSSISL LASSEKPNVL YSDIGGCDIQ KQEIREAVEL PLTHHELYKQ IGIDPPRGVL
201: LYGPPGTGKT MLAKAVAHHT TAAFIRVVGS EFVQKYLGEG PRMVRDVFRL AKENAPAIIF IDEVDAIATA RFDAQTGADR EVQRILMELL NQMDGFDQTV
301: NVKVIMATNR ADTLDPALLR PGRLDRKIEF PLPDRRQKRL VFQVCTAKMN LSDEVDLEDY VSRPDKISAA DITAICQEAG MHAVRKNRYV ILPKDFEKGY
401: RTNVKKPETD FDFYK
001: MASAAVASMV LDPKASPALM DLSTADEEDL YGRLKSLERQ LEFTDIQEEY VKDEQKNLKR ELLRAQEEVK RIQSVPLVIG QFMEMVDQNN GIVGSTTGSN
101: YYVRILSTIN RELLKPSASV ALHRHSNALV DVLPPEADSS ISLLSQSEKP DVSYNDIGGC DIQKQEIREA VELPLTHHEL YKQIGIDPPR GVLLYGPPGT
201: GKTMLAKAVA NHTTAAFIRV VGSEFVQKYL GEGPRMVRDV FRLAKENAPA IIFIDEVDAI ATARFDAQTG ADREVQRILM ELLNQMDGFD QTVNVKVIMA
301: TNRADTLDPA LLRPGRLDRK IEFPLPDRRQ KRLVFQVCTS KMNLSDEVDL EDYVSRPDKI SAAEIAAICQ EAGMHAVRKN RYVILPKDFE KGYRANVKKP
401: DTDFEFYK
101: YYVRILSTIN RELLKPSASV ALHRHSNALV DVLPPEADSS ISLLSQSEKP DVSYNDIGGC DIQKQEIREA VELPLTHHEL YKQIGIDPPR GVLLYGPPGT
201: GKTMLAKAVA NHTTAAFIRV VGSEFVQKYL GEGPRMVRDV FRLAKENAPA IIFIDEVDAI ATARFDAQTG ADREVQRILM ELLNQMDGFD QTVNVKVIMA
301: TNRADTLDPA LLRPGRLDRK IEFPLPDRRQ KRLVFQVCTS KMNLSDEVDL EDYVSRPDKI SAAEIAAICQ EAGMHAVRKN RYVILPKDFE KGYRANVKKP
401: DTDFEFYK
Arabidopsis Description
RPT3RPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UAH2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.