Factsheet for TraesCS2D01G476000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G499600.1	Wheat	cytosol	99.76	99.76
HORVU2Hr1G107280.1	Barley	cytosol	86.81	97.84
TraesCS2A01G475900.1	Wheat	cytosol	99.76	97.42
TraesCS2D01G083900.1	Wheat	golgi	96.16	96.63
GSMUA_Achr6P12250_001	Banana	cytosol	69.54	95.71
PGSC0003DMT400006190	Potato	cytosol	74.82	95.71
Os02t0325100-01	Rice	plastid	95.92	95.47
KXG39890	Sorghum	cytosol	94.24	93.57
CDY58566	Canola	cytosol	88.25	91.09
CDY43865	Canola	cytosol	88.25	91.09
CDX88666	Canola	cytosol	88.25	91.09
CDY32995	Canola	cytosol, extracellular	88.01	90.84
Bra002662.1-P	Field mustard	cytosol	88.01	90.84
AT5G58290.1	Thale cress	cytosol	88.73	90.69
CDY32714	Canola	cytosol	87.77	90.59
CDY02806	Canola	cytosol	87.77	90.59
Bra020378.1-P	Field mustard	cytosol	87.77	90.59
Bra006775.1-P	Field mustard	cytosol	84.89	90.54
Zm00001d050616_P002	Maize	plastid	94.0	90.32
VIT_06s0004g08220.t01	Wine grape	cytosol	90.17	89.95
Solyc06g082660.2.1	Tomato	cytosol, nucleus	88.49	89.13
Solyc06g082630.2.1	Tomato	cytosol, plastid	88.49	89.13
KRH30674	Soybean	cytosol, nucleus	88.25	89.1
KRG98107	Soybean	cytosol	89.93	88.86
KRH30673	Soybean	cytosol, nucleus	89.21	87.94
Zm00001d015886_P002	Maize	cytosol	81.77	62.92
TraesCS2D01G471200.1	Wheat	cytosol	52.04	47.9
TraesCS2D01G087900.1	Wheat	cytosol, golgi	45.56	42.32
TraesCS6D01G149500.1	Wheat	cytosol	35.97	41.67
TraesCS4D01G190600.1	Wheat	cytosol, golgi	44.84	41.56
TraesCS7D01G532000.1	Wheat	cytosol	39.33	41.21
TraesCS7D01G375500.1	Wheat	cytosol	38.61	40.25
TraesCS6D01G166700.1	Wheat	cytosol, golgi	37.89	37.8
TraesCS7D01G350300.1	Wheat	cytosol	37.41	36.88
TraesCS6D01G326400.1	Wheat	cytosol	37.65	36.85
TraesCS7D01G134800.1	Wheat	cytosol	37.89	36.83
TraesCS3D01G417000.1	Wheat	cytosol	38.13	36.64
TraesCS7D01G157200.1	Wheat	cytosol	37.41	36.62
TraesCS1D01G340100.1	Wheat	cytosol	20.86	33.98
TraesCS1D01G194500.1	Wheat	cytosol	21.58	33.96
TraesCS3D01G153300.1	Wheat	cytosol	17.75	33.04
TraesCS2D01G353100.1	Wheat	cytosol	29.26	21.48
TraesCS3D01G153800.1	Wheat	cytosol	29.02	17.79
TraesCS3D01G154000.1	Wheat	cytosol	31.41	16.62
TraesCS1D01G399100.1	Wheat	cytosol	31.18	16.48
TraesCS5D01G081900.1	Wheat	mitochondrion	29.26	16.42
TraesCS1D01G248000.1	Wheat	cytosol	30.94	16.35
TraesCS3D01G443600.1	Wheat	mitochondrion	29.02	16.18
TraesCS1D01G253100.1	Wheat	cytosol	30.7	16.0
TraesCS3D01G153900.1	Wheat	cytosol	30.22	15.99
TraesCS1D01G223800.1	Wheat	cytosol	30.46	15.88
TraesCS4D01G267600.2	Wheat	cytosol	30.94	15.77
TraesCS4D01G267800.1	Wheat	cytosol	30.7	15.74
TraesCS7D01G023600.1	Wheat	mitochondrion	29.5	15.67
TraesCS6D01G360700.1	Wheat	cytosol	26.38	14.95
TraesCS2D01G458300.3	Wheat	mitochondrion	26.14	11.68
TraesCS1D01G073600.1	Wheat	cytosol, plastid	28.06	11.64
TraesCS4D01G105500.2	Wheat	cytosol, plastid	27.1	11.23
TraesCS5D01G306600.2	Wheat	mitochondrion	26.14	9.96
TraesCS7D01G277100.1	Wheat	cytosol, peroxisome, plastid	23.98	9.17

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.6.2.1.3	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0030163	GO:GO:0036402	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	InterPro:PSMC4
PANTHER:PTHR23073	PANTHER:PTHR23073:SF8	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR01242	EnsemblPlantsGene:TraesCS2D01G476000
EnsemblPlants:TraesCS2D01G476000.1	TIGR:cd00009	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:+:578600023..578603687

Molecular Weight (calculated)

46390.5 Da

IEP (calculated)

6.080

GRAVY (calculated)

-0.341

Length

417 amino acids

Sequence
(BLAST)

001: MATAANPPAA LPSAPPPSYP ATAAHCASSS AAAEDDDDLY GRLKSLQRHM EFVEIQEEYV KDEQKNLKRE LLRAQEEVKR IQSVPLVIGQ FMEMVDGNNG
101: IVGSTTGSNY YVRILSTINR ELLKPSASVA LHRHSNALVD VLPPEADSSI SLLASSEKPN VLYSDIGGCD IQKQEIREAV ELPLTHHELY KQIGIDPPRG
201: VLLYGPPGTG KTMLAKAVAH HTTAAFIRVV GSEFVQKYLG EGPRMVRDVF RLAKENAPAI IFIDEVDAIA TARFDAQTGA DREVQRILME LLNQMDGFDQ
301: TVNVKVIMAT NRADTLDPAL LRPGRLDRKI EFPLPDRRQK RLVFQVCTSK MNLSDEVDLE DYVSRPDKIS AADITAICQE AGMHAVRKNR YVILPKDFEK
401: GYRTNVKKPD TDFDFYK

Best Arabidopsis Sequence Match ( AT5G58290.1 )
(BLAST)

001: MASAAVASMV LDPKASPALM DLSTADEEDL YGRLKSLERQ LEFTDIQEEY VKDEQKNLKR ELLRAQEEVK RIQSVPLVIG QFMEMVDQNN GIVGSTTGSN
101: YYVRILSTIN RELLKPSASV ALHRHSNALV DVLPPEADSS ISLLSQSEKP DVSYNDIGGC DIQKQEIREA VELPLTHHEL YKQIGIDPPR GVLLYGPPGT
201: GKTMLAKAVA NHTTAAFIRV VGSEFVQKYL GEGPRMVRDV FRLAKENAPA IIFIDEVDAI ATARFDAQTG ADREVQRILM ELLNQMDGFD QTVNVKVIMA
301: TNRADTLDPA LLRPGRLDRK IEFPLPDRRQ KRLVFQVCTS KMNLSDEVDL EDYVSRPDKI SAAEIAAICQ EAGMHAVRKN RYVILPKDFE KGYRANVKKP
401: DTDFEFYK

Arabidopsis Description

RPT3RPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UAH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.