Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G457600.3 | Wheat | mitochondrion | 98.5 | 98.5 |
| TraesCS2B01G480000.3 | Wheat | mitochondrion | 97.53 | 97.53 |
| HORVU2Hr1G104530.9 | Barley | cytosol | 92.82 | 94.85 |
| EES12865 | Sorghum | mitochondrion | 82.21 | 82.65 |
| Os04t0617600-01 | Rice | cytosol | 82.21 | 81.6 |
| Zm00001d002462_P010 | Maize | mitochondrion | 78.67 | 69.05 |
| GSMUA_Achr6P20030_001 | Banana | cytosol | 56.81 | 54.87 |
| KRG96401 | Soybean | mitochondrion | 52.41 | 53.21 |
| Solyc06g008730.2.1 | Tomato | cytosol | 52.09 | 52.31 |
| PGSC0003DMT400013679 | Potato | cytosol | 51.98 | 52.15 |
| VIT_07s0104g01610.t01 | Wine grape | cytosol | 51.55 | 51.28 |
| KRH68139 | Soybean | cytosol | 36.76 | 51.19 |
| CDY37450 | Canola | mitochondrion | 50.7 | 51.14 |
| CDY32490 | Canola | mitochondrion | 50.59 | 50.92 |
| AT1G03000.1 | Thale cress | mitochondrion | 50.7 | 50.27 |
| CDX89923 | Canola | cytosol | 40.84 | 49.87 |
| TraesCS3D01G153300.1 | Wheat | cytosol | 10.4 | 43.3 |
| TraesCS1D01G340100.1 | Wheat | cytosol | 11.79 | 42.97 |
| TraesCS1D01G194500.1 | Wheat | cytosol | 12.11 | 42.64 |
| TraesCS3D01G153800.1 | Wheat | cytosol | 21.11 | 28.97 |
| TraesCS6D01G149500.1 | Wheat | cytosol | 11.15 | 28.89 |
| TraesCS2D01G353100.1 | Wheat | cytosol | 16.93 | 27.82 |
| TraesCS7D01G532000.1 | Wheat | cytosol | 11.79 | 27.64 |
| TraesCS7D01G375500.1 | Wheat | cytosol | 11.79 | 27.5 |
| TraesCS6D01G166700.1 | Wheat | cytosol, golgi | 12.22 | 27.27 |
| TraesCS1D01G253100.1 | Wheat | cytosol | 23.37 | 27.25 |
| TraesCS1D01G248000.1 | Wheat | cytosol | 23.04 | 27.25 |
| TraesCS7D01G157200.1 | Wheat | cytosol | 12.43 | 27.23 |
| TraesCS7D01G350300.1 | Wheat | cytosol | 12.33 | 27.19 |
| TraesCS1D01G223800.1 | Wheat | cytosol | 23.26 | 27.12 |
| TraesCS1D01G399100.1 | Wheat | cytosol | 22.94 | 27.12 |
| TraesCS6D01G360700.1 | Wheat | cytosol | 21.33 | 27.04 |
| TraesCS4D01G190600.1 | Wheat | cytosol, golgi | 12.97 | 26.89 |
| TraesCS4D01G267800.1 | Wheat | cytosol | 23.37 | 26.81 |
| TraesCS3D01G154000.1 | Wheat | cytosol | 22.62 | 26.78 |
| TraesCS4D01G267600.2 | Wheat | cytosol | 23.47 | 26.77 |
| TraesCS6D01G326400.1 | Wheat | cytosol | 12.22 | 26.76 |
| TraesCS2D01G083900.1 | Wheat | golgi | 11.79 | 26.51 |
| TraesCS2D01G471200.1 | Wheat | cytosol | 12.86 | 26.49 |
| TraesCS2D01G087900.1 | Wheat | cytosol, golgi | 12.65 | 26.28 |
| TraesCS3D01G153900.1 | Wheat | cytosol | 22.19 | 26.27 |
| TraesCS2D01G476000.1 | Wheat | cytosol | 11.68 | 26.14 |
| TraesCS3D01G417000.1 | Wheat | cytosol | 11.9 | 25.58 |
| TraesCS7D01G134800.1 | Wheat | cytosol | 11.68 | 25.41 |
| Bra032565.1-P | Field mustard | mitochondrion | 50.48 | 25.27 |
| TraesCS5D01G081900.1 | Wheat | mitochondrion | 19.4 | 24.36 |
| TraesCS7D01G023600.1 | Wheat | mitochondrion | 20.26 | 24.08 |
| TraesCS3D01G443600.1 | Wheat | mitochondrion | 19.29 | 24.06 |
| TraesCS1D01G073600.1 | Wheat | cytosol, plastid | 21.76 | 20.2 |
| TraesCS4D01G105500.2 | Wheat | cytosol, plastid | 21.76 | 20.18 |
| TraesCS5D01G306600.2 | Wheat | mitochondrion | 21.97 | 18.74 |
| TraesCS7D01G277100.1 | Wheat | cytosol, peroxisome, plastid | 21.33 | 18.26 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:23.4.1.5.1.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006629 | GO:GO:0006635 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016558 | InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | PANTHER:PTHR23077 | PANTHER:PTHR23077:SF9 |
| SMART:SM00382 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS2D01G458300 | EnsemblPlants:TraesCS2D01G458300.3 | TIGR:cd00009 | SEG:seg |
Description
No Description!
Coordinates
chr2D:-:565308058..565313421
Molecular Weight (calculated)
101421.0 Da
IEP (calculated)
6.171
GRAVY (calculated)
-0.160
Length
933 amino acids
Sequence
(BLAST)
(BLAST)
001: MVERRSRRKP LVLASTQALL DSLPGERRGP APPPPESVRL RAGVLRFPAR PSGPGCGGEF GDLASFVALP TSALRRLAVV TGTTVLVKNT DNNVGRIVKA
101: VVLDRPSLEE SKREHPDSDP VASTSSSDRV MGFLPTRSFP ANGFAPLDED VAYVSPLLAF NLGVHVSCLK LLIQKGEEPF KFCSKVFEDG SAGSGTGISL
201: HLELLPCPQV PKHALHLRVS VVRIPDCGVL ASLKINSAIG GSDYQDMIDQ ALNEHFKFDR FLASGDVFCI HNDWNCGMIS CLACNKENDR LHPPSMIYFK
301: VTGMEPSNEP ILRVNRDQTA LVLGGSASAP IPPCSFFSAN DDSVPLHGEV VEQLASIIAP ALCPSNILPR IKFSTFLYGP SGCGKRTVVR HVANHLGMHV
401: VECCCHDLMT SSESGASAAL VAAFKEAQKY SPSIILLRHF DAIGNTSSNE GPQSEQSGIA ANVESVIKQY TGQRWVVKDS LPARDVIGNS YLVEPECVSS
501: VQVILVATAD SAEGMQQSIR RCFRHEVNMK TINEDQRKNL ISETLHGVSA VADESIDDKF VKDISVQTSG FMPRDILALV ADAGVSFAHK VAVEKSSNDE
601: LEDAPTASSS TTQKEENHFC KEDILSSLER AKKRNRAALG TPKVPDVKWE DVGGLEEVKK VILDTIQLPL LYKHLFSSKL PKRSGVLLYG PPGTGKTLLA
701: KAVATECSLN FLSVKGPELI NMYVGESEKN VRDIFEKARS ARPCVIFFDE LDSLAPARGS SADSGGVMDR VVSQLLVEID GLSDNSQDLF IIGATNRPDL
801: LDSALLRPGR FDKLLYIGVN TEASYRERIL KAQTRKYKLN ENVSLLSIAQ HCPPNFTGAD IYALCADAWF HAAKRSVKTL EADPSRNNDA GAEEVIVETE
901: DFMTVLGDIS PSLSMEELQN YEQLRQKIEG PSR
101: VVLDRPSLEE SKREHPDSDP VASTSSSDRV MGFLPTRSFP ANGFAPLDED VAYVSPLLAF NLGVHVSCLK LLIQKGEEPF KFCSKVFEDG SAGSGTGISL
201: HLELLPCPQV PKHALHLRVS VVRIPDCGVL ASLKINSAIG GSDYQDMIDQ ALNEHFKFDR FLASGDVFCI HNDWNCGMIS CLACNKENDR LHPPSMIYFK
301: VTGMEPSNEP ILRVNRDQTA LVLGGSASAP IPPCSFFSAN DDSVPLHGEV VEQLASIIAP ALCPSNILPR IKFSTFLYGP SGCGKRTVVR HVANHLGMHV
401: VECCCHDLMT SSESGASAAL VAAFKEAQKY SPSIILLRHF DAIGNTSSNE GPQSEQSGIA ANVESVIKQY TGQRWVVKDS LPARDVIGNS YLVEPECVSS
501: VQVILVATAD SAEGMQQSIR RCFRHEVNMK TINEDQRKNL ISETLHGVSA VADESIDDKF VKDISVQTSG FMPRDILALV ADAGVSFAHK VAVEKSSNDE
601: LEDAPTASSS TTQKEENHFC KEDILSSLER AKKRNRAALG TPKVPDVKWE DVGGLEEVKK VILDTIQLPL LYKHLFSSKL PKRSGVLLYG PPGTGKTLLA
701: KAVATECSLN FLSVKGPELI NMYVGESEKN VRDIFEKARS ARPCVIFFDE LDSLAPARGS SADSGGVMDR VVSQLLVEID GLSDNSQDLF IIGATNRPDL
801: LDSALLRPGR FDKLLYIGVN TEASYRERIL KAQTRKYKLN ENVSLLSIAQ HCPPNFTGAD IYALCADAWF HAAKRSVKTL EADPSRNNDA GAEEVIVETE
901: DFMTVLGDIS PSLSMEELQN YEQLRQKIEG PSR
001: MVERRNPLVL SSTRSTLRSV LNSSQPSSAD GDRVLNKDGD LLRGNARLSA GILRWRKDGE NVSDAKLDSL DDSALVGLST QLLKRLSINS GSLVVVKNIE
101: IGIQRVAQVV VLDPPKTTLE DASLTQVPVS DSLHTMLVFP TYDLMGQQLL DQEVAYLSPM LAFNLSLHIS CLKSLVHRGN GVLEKYFEAK CDEEFIGKSA
201: EDGSKIGLDL EPVSQVPGYA SHLRVSFVKI PECGTIPSLK VNSSFEAEER QGLIDSALQK YFGTDRQLSR GDIFRIYIDW NCGSSICNPC SQRLCSESDD
301: YIYFKVIAME PSNERFLRVN HSQTALVLGG TVSSGLPPDL LVYRSKVPMP LQEETVNILA SVLSPPLCPS ALASKLRVAV LLHGIPGCGK RTVVKYVARR
401: LGLHVVEFSC HSLLASSERK TSTALAQTFN MARRYSPTIL LLRHFDVFKN LGSQDGSLGD RVGVSFEIAS VIRELTEPVS NGDSSMEEKS NSNFSENEVG
501: KFRGHQVLLI ASAESTEGIS PTIRRCFSHE IRMGSLNDEQ RSEMLSQSLQ GVSQFLNISS DEFMKGLVGQ TSGFLPRDLQ ALVADAGANL YISQESETKK
601: INSLSDDLHG VDIHQASQID NSTEKLTAKE DFTKALDRSK KRNASALGAP KVPNVKWDDV GGLEDVKTSI LDTVQLPLLH KDLFSSGLRK RSGVLLYGPP
701: GTGKTLLAKA VATECSLNFL SVKGPELINM YIGESEKNVR DIFEKARSAR PCVIFFDELD SLAPARGASG DSGGVMDRVV SQMLAEIDGL SDSSQDLFII
801: GASNRPDLID PALLRPGRFD KLLYVGVNAD ASYRERVLKA LTRKFKLSED VSLYSVAKKC PSTFTGADMY ALCADAWFQA AKRKVSKSDS GDMPTEEDDP
901: DSVVVEYVDF IKAMDQLSPS LSITELKKYE MLRDQFQGRS S
101: IGIQRVAQVV VLDPPKTTLE DASLTQVPVS DSLHTMLVFP TYDLMGQQLL DQEVAYLSPM LAFNLSLHIS CLKSLVHRGN GVLEKYFEAK CDEEFIGKSA
201: EDGSKIGLDL EPVSQVPGYA SHLRVSFVKI PECGTIPSLK VNSSFEAEER QGLIDSALQK YFGTDRQLSR GDIFRIYIDW NCGSSICNPC SQRLCSESDD
301: YIYFKVIAME PSNERFLRVN HSQTALVLGG TVSSGLPPDL LVYRSKVPMP LQEETVNILA SVLSPPLCPS ALASKLRVAV LLHGIPGCGK RTVVKYVARR
401: LGLHVVEFSC HSLLASSERK TSTALAQTFN MARRYSPTIL LLRHFDVFKN LGSQDGSLGD RVGVSFEIAS VIRELTEPVS NGDSSMEEKS NSNFSENEVG
501: KFRGHQVLLI ASAESTEGIS PTIRRCFSHE IRMGSLNDEQ RSEMLSQSLQ GVSQFLNISS DEFMKGLVGQ TSGFLPRDLQ ALVADAGANL YISQESETKK
601: INSLSDDLHG VDIHQASQID NSTEKLTAKE DFTKALDRSK KRNASALGAP KVPNVKWDDV GGLEDVKTSI LDTVQLPLLH KDLFSSGLRK RSGVLLYGPP
701: GTGKTLLAKA VATECSLNFL SVKGPELINM YIGESEKNVR DIFEKARSAR PCVIFFDELD SLAPARGASG DSGGVMDRVV SQMLAEIDGL SDSSQDLFII
801: GASNRPDLID PALLRPGRFD KLLYVGVNAD ASYRERVLKA LTRKFKLSED VSLYSVAKKC PSTFTGADMY ALCADAWFQA AKRKVSKSDS GDMPTEEDDP
901: DSVVVEYVDF IKAMDQLSPS LSITELKKYE MLRDQFQGRS S
Arabidopsis Description
PEX6Peroxisome biogenesis protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY16]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.