CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37450	Canola	mitochondrion	95.36	95.57
CDX89923	Canola	cytosol	72.06	87.43
AT1G03000.1	Thale cress	mitochondrion	85.76	84.48
CDY18139	Canola	extracellular, vacuole	26.54	81.19
VIT_07s0104g01610.t01	Wine grape	cytosol	65.16	64.39
Solyc06g008730.2.1	Tomato	cytosol	63.11	62.97
KRG96401	Soybean	mitochondrion	62.24	62.79
PGSC0003DMT400013679	Potato	cytosol	62.89	62.69
KRH68139	Soybean	cytosol	45.2	62.54
GSMUA_Achr6P20030_001	Banana	cytosol	58.68	56.31
EES12865	Sorghum	mitochondrion	51.67	51.62
TraesCS2B01G480000.3	Wheat	mitochondrion	51.02	50.7
TraesCS2D01G458300.3	Wheat	mitochondrion	50.92	50.59
TraesCS2A01G457600.3	Wheat	mitochondrion	50.92	50.59
Os04t0617600-01	Rice	cytosol	51.13	50.43
HORVU2Hr1G104530.9	Barley	cytosol	48.44	49.18
Bra032565.1-P	Field mustard	mitochondrion	98.81	49.14
Zm00001d002462_P010	Maize	mitochondrion	51.56	44.97
CDY25624	Canola	cytosol	11.11	41.04
CDY20370	Canola	cytosol	10.9	37.55
CDY39032	Canola	cytosol	9.82	36.26
CDX97472	Canola	cytosol	14.02	29.21
CDY14224	Canola	cytosol	14.02	29.21
CDX92914	Canola	cytosol, extracellular	13.92	29.12
CDY06847	Canola	cytosol	13.92	29.12
CDY35245	Canola	cytosol	13.92	29.12
CDY11249	Canola	cytosol	24.49	28.45
CDY54618	Canola	cytosol	24.6	28.22
CDY41581	Canola	cytosol	24.6	28.22
CDY39033	Canola	cytosol	12.3	28.08
CDX80862	Canola	cytosol, plastid	24.49	28.06
CDX73996	Canola	cytosol	24.49	28.06
CDY07941	Canola	cytosol	24.49	28.06
CDY22207	Canola	cytosol	24.49	28.02
CDY41316	Canola	cytosol, extracellular	24.49	28.02
CDX74842	Canola	cytosol	12.41	27.91
CDX70903	Canola	cytosol	12.51	27.88
CDY22373	Canola	cytosol	11.97	27.82
CDY25226	Canola	cytosol	11.97	27.82
CDY02428	Canola	cytosol, extracellular	11.97	27.82
CDX71534	Canola	cytosol	11.97	27.82
CDY02494	Canola	cytosol	12.73	27.7
CDY25685	Canola	cytosol	12.73	27.7
CDY35832	Canola	cytosol	12.51	27.68
CDY13308	Canola	cytosol	24.16	27.65
CDY04161	Canola	cytosol	17.91	27.53
CDY20470	Canola	cytosol, plasma membrane	12.62	27.46
CDY36602	Canola	cytosol	12.62	27.46
CDY30665	Canola	cytosol	12.62	27.46
CDY24076	Canola	cytosol	12.62	27.46
CDX74142	Canola	cytosol	12.3	26.89
CDY27761	Canola	cytosol	12.3	26.89
CDY18782	Canola	cytosol	12.3	26.89
CDY40714	Canola	cytosol	12.3	26.89
CDY18801	Canola	cytosol	12.3	26.89
CDY05176	Canola	cytosol	12.3	26.89
CDY02806	Canola	cytosol	11.65	26.73
CDY43865	Canola	cytosol	11.65	26.73
CDX88666	Canola	cytosol	11.65	26.73
CDY32995	Canola	cytosol, extracellular	11.65	26.73
CDY32714	Canola	cytosol	11.65	26.73
CDY58566	Canola	cytosol	11.65	26.73
CDX74308	Canola	mitochondrion	20.28	26.63
CDY20371	Canola	cytosol, plastid	12.41	26.14
CDX78154	Canola	cytosol	20.6	25.67
CDX73571	Canola	cytosol	20.5	25.57
CDX84794	Canola	cytosol	20.5	25.57
CDY59958	Canola	cytosol	10.03	25.55
CDY23949	Canola	cytosol	19.96	25.52
CDX67563	Canola	cytosol	24.16	25.48
CDX91939	Canola	cytosol, mitochondrion	21.14	25.23
CDY45794	Canola	nucleus	21.47	24.97
CDY30663	Canola	cytosol	11.54	24.77
CDY08201	Canola	cytosol	9.28	24.23
CDY33111	Canola	endoplasmic reticulum, plasma membrane, vacuole	18.66	24.16
CDX72118	Canola	plastid	23.09	22.67
CDY56774	Canola	plastid	23.41	21.32
CDX89698	Canola	endoplasmic reticulum	15.97	21.3
CDX88865	Canola	cytosol, extracellular	12.62	18.6
CDY62119	Canola	cytosol	21.04	17.86
CDX69950	Canola	cytosol	21.04	17.86
CDY42324	Canola	cytosol, extracellular	12.62	16.32
CDY44958	Canola	cytosol, plasma membrane	12.51	16.09
CDY02982	Canola	cytosol	19.31	15.18
CDY69655	Canola	cytosol, nucleus	0.32	1.32

Protein Annotations

Gene3D:1.10.8.60	MapMan:23.4.1.5.1.2	Gene3D:3.40.50.300	GO:A0A078H1B9	UniProt:A0A078H1B9	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EnsemblPlants:CDY32490	ProteinID:CDY32490	ProteinID:CDY32490.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00052466001	InterPro:P-loop_NTPase	PFAM:PF00004
ScanProsite:PS00674	PANTHER:PTHR23077	PANTHER:PTHR23077:SF9	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0004EED22D
SEG:seg	:	:	:	:	:

Description

BnaA09g51060DBnaA09g51060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1B9]

Coordinates

chrLK032295:-:210664..214981

Molecular Weight (calculated)

101122.0 Da

IEP (calculated)

5.376

GRAVY (calculated)

-0.162

Length

927 amino acids

Sequence
(BLAST)

001: MVERRSPLVL SSTRATLRSV LNSFRPDEIP GRPDSIRRSV RLPAGVLRWK RDGVNDSKFD SLDDSSLVGL STQLLKRLSI NSGSFVVINN IDIGIQRVAQ
101: VVVLDPPNKT LEDSSVTSLP VSDSLHTMLV FPTFDTMSQQ LLDQEVAYLS PMLAFNLSLH MSCLKSLVHR GNEVLEKYFV AKFDEESASV AGESKIGLDL
201: EPVSEVPGYA SHLRVSFVKI PECGTIQSLV VSSSFEDEER QGLIDSALNK YFGTDRVLSR GDVFRVCTEW NCGSSICVQC GQGLGSKEED FIYFKVVAME
301: PSDERFLRVH HSQTALVLGG TVSCGLPPDL LVSSSKANMP LQVDTVNVLA SVLSPPLCPS ALSSKLRVAV LLHGLPGCGK RTVVNYVAKR LGLHVVEYSC
401: HSLLASSEKK TSTALAQTFN MARRYAPTIL LLRHFEVFKN LGSQDGSQGD RVGVASEIAS IIRELTEPVS NGEYSSMEEN SNSNSSVDEG GKFRGHQVLL
501: IASSESTEGL SPTIRRCFSH EIRMGSLNDE QRSELLSQSL QDVSQLLNTS SDEFVKELVG QTSGFLPRDL RALVADAGAN LFISKESETE KIDSLSGDVD
601: QSSQLGNGSE RLKAKDDFTK ALDRSKKRNA SALGAPKVPN VKWDDVGGLE DVKSSILDTV QLPLLHKDLF SSGLRKRSGV LLYGPPGTGK TLLAKAVATE
701: CSLNFLSVKG PELINMYIGE SEKNVRDIFE KARSARPCVI FFDELDSLAP ARGASGDSGG VMDRVVSQML AEIDGLSDSS QDLFIIGASN RPDLIDPALL
801: RPGRFDKLLY VGVNADASYR ERVLKALTRK FKLSEDVSLY LVAKKCPSTF TGADMYALCA DAWFQAAKRK VLNSDSGDDS IPEDDPDSVV VEFIDFIKAM
901: DQLSPSLSIT ELKKYEALRD QFQGRSS

Best Arabidopsis Sequence Match ( AT1G03000.1 )
(BLAST)

001: MVERRNPLVL SSTRSTLRSV LNSSQPSSAD GDRVLNKDGD LLRGNARLSA GILRWRKDGE NVSDAKLDSL DDSALVGLST QLLKRLSINS GSLVVVKNIE
101: IGIQRVAQVV VLDPPKTTLE DASLTQVPVS DSLHTMLVFP TYDLMGQQLL DQEVAYLSPM LAFNLSLHIS CLKSLVHRGN GVLEKYFEAK CDEEFIGKSA
201: EDGSKIGLDL EPVSQVPGYA SHLRVSFVKI PECGTIPSLK VNSSFEAEER QGLIDSALQK YFGTDRQLSR GDIFRIYIDW NCGSSICNPC SQRLCSESDD
301: YIYFKVIAME PSNERFLRVN HSQTALVLGG TVSSGLPPDL LVYRSKVPMP LQEETVNILA SVLSPPLCPS ALASKLRVAV LLHGIPGCGK RTVVKYVARR
401: LGLHVVEFSC HSLLASSERK TSTALAQTFN MARRYSPTIL LLRHFDVFKN LGSQDGSLGD RVGVSFEIAS VIRELTEPVS NGDSSMEEKS NSNFSENEVG
501: KFRGHQVLLI ASAESTEGIS PTIRRCFSHE IRMGSLNDEQ RSEMLSQSLQ GVSQFLNISS DEFMKGLVGQ TSGFLPRDLQ ALVADAGANL YISQESETKK
601: INSLSDDLHG VDIHQASQID NSTEKLTAKE DFTKALDRSK KRNASALGAP KVPNVKWDDV GGLEDVKTSI LDTVQLPLLH KDLFSSGLRK RSGVLLYGPP
701: GTGKTLLAKA VATECSLNFL SVKGPELINM YIGESEKNVR DIFEKARSAR PCVIFFDELD SLAPARGASG DSGGVMDRVV SQMLAEIDGL SDSSQDLFII
801: GASNRPDLID PALLRPGRFD KLLYVGVNAD ASYRERVLKA LTRKFKLSED VSLYSVAKKC PSTFTGADMY ALCADAWFQA AKRKVSKSDS GDMPTEEDDP
901: DSVVVEYVDF IKAMDQLSPS LSITELKKYE MLRDQFQGRS S

Arabidopsis Description

PEX6Peroxisome biogenesis protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.