CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017378.1-P	Field mustard	cytosol	99.83	99.83
AT2G03670.1	Thale cress	cytosol	89.39	89.39
CDY33111	Canola	endoplasmic reticulum, plasma membrane, vacuole	97.35	81.98
KRH70928	Soybean	cytosol	71.81	71.45
Solyc05g012190.2.1	Tomato	cytosol	68.99	68.09
PGSC0003DMT400072919	Potato	cytosol	68.82	67.92
Os05t0376200-00	Rice	cytosol	41.63	64.19
KXG26645	Sorghum	cytosol	60.2	63.91
Zm00001d025776_P002	Maize	cytosol	60.03	63.73
TraesCS2B01G373100.1	Wheat	cytosol	60.03	63.62
HORVU2Hr1G086170.2	Barley	cytosol	60.03	63.62
TraesCS2A01G355200.1	Wheat	cytosol	59.7	63.49
TraesCS2D01G353100.1	Wheat	cytosol	59.54	63.2
Os04t0498800-01	Rice	cytosol	57.71	60.21
GSMUA_Achr6P11080_001	Banana	plastid	59.04	59.43
CDY02982	Canola	cytosol	81.59	41.73
CDY25624	Canola	cytosol	16.58	39.84
CDY20370	Canola	cytosol	14.1	31.6
CDY39032	Canola	cytosol	12.44	29.88
CDX74308	Canola	mitochondrion	33.33	28.47
CDX88666	Canola	cytosol	18.74	27.97
CDY58566	Canola	cytosol	18.74	27.97
CDY02806	Canola	cytosol	18.74	27.97
CDY32714	Canola	cytosol	18.74	27.97
CDY43865	Canola	cytosol	18.74	27.97
CDY32995	Canola	cytosol, extracellular	18.74	27.97
CDY11249	Canola	cytosol	36.98	27.94
CDY54618	Canola	cytosol	37.15	27.72
CDY41581	Canola	cytosol	37.15	27.72
CDY13308	Canola	cytosol	37.15	27.65
CDY07941	Canola	cytosol	36.98	27.56
CDX73996	Canola	cytosol	36.98	27.56
CDY41316	Canola	cytosol, extracellular	36.98	27.53
CDY22207	Canola	cytosol	36.98	27.53
CDX84794	Canola	cytosol	33.66	27.32
CDX71534	Canola	cytosol	18.08	27.32
CDY02428	Canola	cytosol, extracellular	18.08	27.32
CDY22373	Canola	cytosol	18.08	27.32
CDY25226	Canola	cytosol	18.08	27.32
CDX80862	Canola	cytosol, plastid	36.65	27.32
CDX74842	Canola	cytosol	18.41	26.94
CDY23949	Canola	cytosol	32.34	26.9
CDY40714	Canola	cytosol	18.91	26.89
CDX74142	Canola	cytosol	18.91	26.89
CDY27761	Canola	cytosol	18.91	26.89
CDY05176	Canola	cytosol	18.91	26.89
CDY18782	Canola	cytosol	18.91	26.89
CDY18801	Canola	cytosol	18.91	26.89
CDY24076	Canola	cytosol	18.91	26.76
CDY02494	Canola	cytosol	18.91	26.76
CDY36602	Canola	cytosol	18.91	26.76
CDY25685	Canola	cytosol	18.91	26.76
CDY30665	Canola	cytosol	18.91	26.76
CDX70903	Canola	cytosol	18.41	26.68
CDY20470	Canola	cytosol, plasma membrane	18.74	26.53
CDY35832	Canola	cytosol	18.41	26.49
CDX91939	Canola	cytosol, mitochondrion	34.0	26.38
CDX73571	Canola	cytosol	32.5	26.38
CDX78154	Canola	cytosol	32.5	26.34
CDX92914	Canola	cytosol, extracellular	19.24	26.19
CDY35245	Canola	cytosol	19.24	26.19
CDY39033	Canola	cytosol	17.58	26.11
CDY14224	Canola	cytosol	19.24	26.07
CDX97472	Canola	cytosol	19.24	26.07
CDY06847	Canola	cytosol	19.07	25.96
CDY08201	Canola	cytosol	15.09	25.63
CDY45794	Canola	nucleus	32.67	24.72
CDX67563	Canola	cytosol	35.99	24.69
CDY59958	Canola	cytosol	14.76	24.45
CDY20371	Canola	cytosol, plastid	17.58	24.09
CDY30663	Canola	cytosol	16.92	23.61
CDX89698	Canola	endoplasmic reticulum	26.37	22.88
CDX72118	Canola	plastid	35.49	22.67
CDX89923	Canola	cytosol	27.69	21.86
CDY56774	Canola	plastid	34.99	20.73
CDY37450	Canola	mitochondrion	27.53	17.95
CDY32490	Canola	mitochondrion	27.53	17.91
CDX88865	Canola	cytosol, extracellular	18.41	17.65
CDY18139	Canola	extracellular, vacuole	8.13	16.17
CDY42324	Canola	cytosol, extracellular	18.41	15.48
CDY44958	Canola	cytosol, plasma membrane	18.41	15.4
CDX69950	Canola	cytosol	27.86	15.38
CDY62119	Canola	cytosol	27.69	15.29
CDY69655	Canola	cytosol, nucleus	0.33	0.88

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078ESE8	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	EnsemblPlants:CDY04161	ProteinID:CDY04161	ProteinID:CDY04161.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00117838001	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674
PANTHER:PTHR23077	PANTHER:PTHR23077:SF117	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0004EE2CC2	SEG:seg

Description

BnaA09g19390D

Coordinates

chrLK031949:+:706582..709560

Molecular Weight (calculated)

65395.5 Da

IEP (calculated)

7.522

GRAVY (calculated)

-0.122

Length

603 amino acids

Sequence
(BLAST)

001: METQTSGCDN IVGDDTWRAE AEIGGNERAL QALRELIIFP FRYPLEARTL GLKWSRGLLL YGPPGTGKTS LVRAVVQECD AHLTVLSPHS VHRAHAGESE
101: KVLREAFAEA SSHAGSDKPS VIFIDEIDVL CPKRSSRGEQ GVRIASQLFT LMDSNKPSSS PPRVVVVAST NRLDAIDPAL RRAGRFDTLV EVSTPNEEDR
201: LKILQLYTKK VSLDPSLDLQ AIATSCNGYV GADLEALCRE ATISASKRST DSLILTSQDF KVAKSVVGPS ITRGITVEIP KVTWDDVGGL KDLKKKLQQA
301: VEWPIKHSAA FTKMGISPMR GILLHGPPGC SKTTLAKAAA NAAQASFFSL SCAELFSMYV GEGEALLRNT FQRARLASPS IIFFDEADVV ACKRGDEGSS
401: NSSTVGERLL STLLTEMDGL EEAKGILVLA ATNRPYAIDA ALMRPGRFDL VLYVPPPDLE ARLEILQVHT RSMKLGDDVD LRKIAEETDL FTGAELEGLC
501: RESGTVSLRE NIAASGVFNR HFLTAKKSLK PALTVEEVET YASFRKSKSS DSRTVPVEKK KVNHSNVLGL GLSWKVGVLS LMLVAAGNFY VKQTKHVELA
601: AAT

Best Arabidopsis Sequence Match ( AT2G03670.1 )
(BLAST)

001: MLETESSVCD NIAGNEKWRA EAEIGGNERA LQALRELIIF PFRYPLEART LGLKWPRGLL LYGPPGTGKT SLVRAVVQEC DAHLIVLSPH SVHRAHAGES
101: EKVLREAFAE ASSHAVSDKP SVIFIDEIDV LCPRRDARRE QDVRIASQLF TLMDSNKPSS SAPRVVVVAS TNRVDAIDPA LRRAGRFDAL VEVSTPNEED
201: RLKILQLYTK KVNLDPSVDL QAIAISCNGY VGADLEALCR EATISASKRS SDSLILTSQD FKIAKSVVGP SINRGITVEI PKVTWDDVGG LKDLKKKLQQ
301: AVEWPIKHSA AFVKMGISPM RGILLHGPPG CSKTTLAKAA ANAAQASFFS LSCAELFSMY VGEGEALLRN TFQRARLASP SIIFFDEADV VACKRGDESS
401: SNSSTVGERL LSTLLTEMDG LEEAKGILVL AATNRPYAID AALMRPGRFD LVLYVPPPDL EARFEILQVH TRNMTLGDDV DLRKIAEETD LFTGAELEGL
501: CRESGTVSLR ENIAATAVFN RHFQTAKSSL KPALTIEEVE TYSSFRKAAK RSDSKPIPIN KKKATSTVFG FSWQLGVLSL LLLATGNYYF NHTKHELLVA
601: SAT

Arabidopsis Description

CDC48BCell division control protein 48 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.