Factsheet for Os04t0498800-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0376200-00	Rice	cytosol	66.44	98.21
TraesCS2B01G373100.1	Wheat	cytosol	78.72	79.96
TraesCS2D01G353100.1	Wheat	cytosol	78.55	79.93
HORVU2Hr1G086170.2	Barley	cytosol	78.37	79.61
TraesCS2A01G355200.1	Wheat	cytosol	78.03	79.54
Zm00001d025776_P002	Maize	cytosol	75.78	77.11
KXG26645	Sorghum	cytosol	75.09	76.41
GSMUA_Achr6P11080_001	Banana	plastid	67.65	65.28
Solyc05g012190.2.1	Tomato	cytosol	62.98	59.57
PGSC0003DMT400072919	Potato	cytosol	62.63	59.25
KRH70928	Soybean	cytosol	61.94	59.08
AT2G03670.1	Thale cress	cytosol	60.73	58.21
CDY04161	Canola	cytosol	60.21	57.71
Bra017378.1-P	Field mustard	cytosol	60.03	57.55
CDY33111	Canola	endoplasmic reticulum, plasma membrane, vacuole	60.21	48.6
Os02t0784700-00	Rice	cytosol	12.28	37.77
Os02t0199900-01	Rice	nucleus, plasma membrane	21.45	31.0
Os06t0607800-01	Rice	nucleus	21.28	30.67
Os04t0284600-01	Rice	cytosol	18.69	30.25
Os02t0325100-01	Rice	plastid	21.28	29.36
Os06t0192600-01	Rice	cytosol, nucleus, plasma membrane, plastid	21.63	29.34
Os02t0803700-01	Rice	cytosol, nucleus, plastid	21.63	29.14
Os06t0173100-01	Rice	cytosol, nucleus, plasma membrane	21.45	28.9
Os06t0600100-01	Rice	plasma membrane	21.11	28.84
Os02t0205300-01	Rice	cytosol	21.11	28.77
CDY02982	Canola	cytosol	58.13	28.5
Os07t0691800-01	Rice	cytosol, nucleus, plasma membrane, plastid	21.8	28.12
Os03t0298400-01	Rice	plasma membrane	21.8	28.0
Os03t0151800-02	Rice	cytosol, extracellular, nucleus, plasma membrane, plastid	38.58	27.56
Os06t0109400-01	Rice	cytosol	36.33	27.27
Os09t0560200-01	Rice	cytosol, mitochondrion	20.59	26.56
Os10t0442600-01	Rice	cytosol, nucleus, plasma membrane, plastid	8.65	25.64
Os08t0413000-00	Rice	mitochondrion	38.58	24.67
Os08t0556550-01	Rice	cytosol	3.81	20.56
Os04t0617600-01	Rice	cytosol	27.85	17.13
Os11t0220400-01	Rice	mitochondrion	3.29	4.06
Os06t0600301-00	Rice	plasma membrane	0.52	1.33
Os08t0556400-01	Rice	endoplasmic reticulum, golgi, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:4336296	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	ProteinID:BAF15129.1	ProteinID:BAS89916.1	ProteinID:EEE61261.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:Os04g0498800	EnsemblPlants:Os04t0498800-01	InterPro:P-loop_NTPase	PFAM:PF00004
ScanProsite:PS00674	PANTHER:PTHR23077	PANTHER:PTHR23077:SF117	UniProt:Q0JC08	SMART:SM00382	SUPFAM:SSF52540
UniParc:UPI000021C667	RefSeq:XP_015637160.1	SEG:seg	:	:	:

Description

Similar to Cell division control protein 48 homolog B (AtCDC48b). (Os04t0498800-01)

Coordinates

chr4:+:24932120..24935908

Molecular Weight (calculated)

62813.2 Da

IEP (calculated)

7.603

GRAVY (calculated)

-0.231

Length

578 amino acids

Sequence
(BLAST)

001: MEEVRGRESK DHRGGGGGGG GDGDGERTGR WRAEEVIAGN RAVLEALREL VMYPVLYARE ARVLGLNFPR GLLLHGPSGT GKKSMVRAVV RECNAHLTVI
101: DSISVHKPHA GEGEKFMREA FTEAYSQASQ GRPAVIFIDE LDDICPPRGS RREQGSRIVG QLLTLMDGKS SKLLPHLVVV ASATRVDAIE SALRRPGRFD
201: SEIEVTVPTA EERFEILKLY TKNLHLGECV DLQSVAASCN GYVGADLQAL CREAARRAYG RLSSSSESEN VLTLIMEDWE SAKSVAKNSV TRGVTKEIPA
301: VSWDDIGGLK AVKKKLQQAV EWPIKHAASF DRLGISPIRG VLLHGPPGCS KTTLAKAAAH AAQASFFSLS GAELYSKYVG EGEALLRRTF QMARLASPSI
401: IFFDEADAIA PKRTGPSGNS SGNATVGERL LSTLLTEMDG LELATGIIVL AATNRPNAID AALLRPGRFD MVLYVPPPDA EGRYEILRIH TRKMPLGDDV
501: DLWKVAERTE LFTGADLEGL CREAGMAALR ESLRSERFVC DDIHFQAALR SLRPSLTQSV VDEYSNAAIH GPLTRRKH

Best Arabidopsis Sequence Match ( AT2G03670.1 )
(BLAST)

001: MLETESSVCD NIAGNEKWRA EAEIGGNERA LQALRELIIF PFRYPLEART LGLKWPRGLL LYGPPGTGKT SLVRAVVQEC DAHLIVLSPH SVHRAHAGES
101: EKVLREAFAE ASSHAVSDKP SVIFIDEIDV LCPRRDARRE QDVRIASQLF TLMDSNKPSS SAPRVVVVAS TNRVDAIDPA LRRAGRFDAL VEVSTPNEED
201: RLKILQLYTK KVNLDPSVDL QAIAISCNGY VGADLEALCR EATISASKRS SDSLILTSQD FKIAKSVVGP SINRGITVEI PKVTWDDVGG LKDLKKKLQQ
301: AVEWPIKHSA AFVKMGISPM RGILLHGPPG CSKTTLAKAA ANAAQASFFS LSCAELFSMY VGEGEALLRN TFQRARLASP SIIFFDEADV VACKRGDESS
401: SNSSTVGERL LSTLLTEMDG LEEAKGILVL AATNRPYAID AALMRPGRFD LVLYVPPPDL EARFEILQVH TRNMTLGDDV DLRKIAEETD LFTGAELEGL
501: CRESGTVSLR ENIAATAVFN RHFQTAKSSL KPALTIEEVE TYSSFRKAAK RSDSKPIPIN KKKATSTVFG FSWQLGVLSL LLLATGNYYF NHTKHELLVA
601: SAT

Arabidopsis Description

CDC48BCell division control protein 48 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.