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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d045566_P001 Maize cytosol, mitochondrion 79.48 79.69
Zm00001d035913_P002 Maize cytosol, mitochondrion 75.32 79.13
EER87717 Sorghum cytosol 79.61 79.1
Zm00001d009592_P001 Maize cytosol 25.32 74.43
Zm00001d022096_P002 Maize mitochondrion 71.3 72.52
TraesCS4A01G463300.1 Wheat mitochondrion 73.51 72.1
TraesCS7A01G025800.1 Wheat mitochondrion 73.25 71.85
TraesCS7D01G023600.1 Wheat mitochondrion 73.12 71.72
TraesCS5D01G081900.1 Wheat mitochondrion 67.66 70.12
TraesCS3B01G487900.1 Wheat mitochondrion 66.23 68.46
TraesCS3D01G443600.1 Wheat mitochondrion 65.97 67.91
TraesCS3A01G450800.1 Wheat mitochondrion 65.58 67.69
HORVU7Hr1G002880.2 Barley plastid 69.74 67.04
CDY25624 Canola cytosol 20.91 64.14
GSMUA_Achr4P03560_001 Banana mitochondrion 64.03 63.04
KRH44049 Soybean nucleus 58.31 56.76
VIT_01s0010g02600.t01 Wine grape cytosol 59.35 55.39
PGSC0003DMT400046254 Potato cytosol 58.18 54.5
Solyc01g068330.2.1 Tomato nucleus 57.66 54.08
CDX74308 Canola mitochondrion 48.83 53.26
PGSC0003DMT400015455 Potato mitochondrion 51.95 52.42
CDX91939 Canola cytosol, mitochondrion 50.26 49.81
CDX84794 Canola cytosol 47.4 49.13
Bra022833.1-P Field mustard cytosol 47.01 48.72
CDY23949 Canola cytosol 45.71 48.55
AT3G01610.2 Thale cress nucleus 52.08 48.31
Bra000999.1-P Field mustard cytosol, mitochondrion 51.43 47.54
CDY45794 Canola nucleus 48.05 46.42
CDX89698 Canola endoplasmic reticulum 39.61 43.88
KRH10420 Soybean mitochondrion 28.18 43.84
Os05t0376200-00 Rice cytosol 20.0 39.39
Os04t0498800-01 Rice cytosol 27.27 36.33
Os02t0784700-00 Rice cytosol 8.57 35.11
Os03t0151800-02 Rice cytosol, extracellular, nucleus, plasma membrane, plastid 33.25 31.64
Os02t0199900-01 Rice nucleus, plasma membrane 15.58 30.0
Os02t0325100-01 Rice plastid 15.45 28.4
Os08t0413000-00 Rice mitochondrion 33.12 28.21
Os02t0205300-01 Rice cytosol 15.45 28.07
Os10t0442600-01 Rice cytosol, nucleus, plasma membrane, plastid 7.01 27.69
Os06t0607800-01 Rice nucleus 14.42 27.68
Os06t0192600-01 Rice cytosol, nucleus, plasma membrane, plastid 15.19 27.46
Os06t0600100-01 Rice plasma membrane 15.06 27.42
Os04t0284600-01 Rice cytosol 12.34 26.61
Os07t0691800-01 Rice cytosol, nucleus, plasma membrane, plastid 14.81 25.45
Os02t0803700-01 Rice cytosol, nucleus, plastid 14.16 25.41
Os03t0298400-01 Rice plasma membrane 14.81 25.33
Os06t0173100-01 Rice cytosol, nucleus, plasma membrane 14.03 25.17
Os09t0560200-01 Rice cytosol, mitochondrion 13.9 23.88
Os04t0617600-01 Rice cytosol 24.55 20.11
Os08t0556550-01 Rice cytosol 2.47 17.76
Os11t0220400-01 Rice mitochondrion 4.55 7.48
Os06t0600301-00 Rice plasma membrane 0.26 0.88
Os08t0556400-01 Rice endoplasmic reticulum, golgi, plasma membrane 0.52 0.57
Protein Annotations
Gene3D:1.10.8.60Gene3D:3.40.50.300MapMan:35.1EntrezGene:4339880InterPro:AAA+_ATPaseInterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_coreProteinID:BAD67691.1ProteinID:BAD67894.1ProteinID:BAF18490.1ProteinID:BAS95777.1ProteinID:EEE64962.1
GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524GO:GO:0008150GO:GO:0009987
GO:GO:0051301EnsemblPlantsGene:Os06g0109400EnsemblPlants:Os06t0109400-01InterPro:P-loop_NTPasePFAM:PF00004ScanProsite:PS00674
PANTHER:PTHR23077PANTHER:PTHR23077:SF55UniProt:Q5VRN1SMART:SM00382SUPFAM:SSF52540UniParc:UPI0000457C49
RefSeq:XP_015644237.1SEG:seg::::
Description
ATPase, AAA-type, core domain containing protein. (Os06t0109400-01)
Coordinates
chr6:+:550937..555650
Molecular Weight (calculated)
84790.8 Da
IEP (calculated)
7.648
GRAVY (calculated)
-0.486
Length
770 amino acids
Sequence
(BLAST)
001: MGKRARHGGS GRSHSPYFES QLRRLITDGG LSSSSAEDVA IALRSRFPEF RRHKLDPFTS AVRRALNSIP SDSHSDSADD SHASTPSQRR RRRPRHDAHA
101: TASSSTSLSD DAAHPPPPPI YDVTKSMLRT QYASQTPKRD TGSNQQLEIE IAAEKPRRLI TSDGGAGGEA KPESAPPSEG GDRGGKGPTF SDLGGMESVI
201: EQLMMEVVVP LCHPEVPRWL GVKPVAGLLL HGPPGCGKTT LAHAIANETG VPFYKISAPE VVSGVSGASE ENIRSLFKKA YRTAPSIVFI DEIDAIASKR
301: ENLQREMERR IVTQLMTCMD EYHQQIGSGS GDVGSESAEK KPGYVIVIGA TNRPDAVDQA LRRPGRFDRE ISLGVPDEYA RKKILMMLTR NLRLEGQLDL
401: LKIARATSSF VGADLKALVD KAGNLAMKRI IDRRRAQFCQ EHDENSKHDW WRQPWDANEI EGLSITMDDF EEATKMVQPS LRREGFSSIP DVTWDDVGGL
501: DSLRKEFDRY IIRCIKQPEE YKTFGLNMQA GFLLFGPPGC GKTLIAKAVA HEAGANFIHI KGPELLNKYV GESESEVRKI FIRAQTNTPC ILFFDEVDAL
601: TTKRGKEGGW VVERLLNQLL IELDGAGERK GVFVIGATNR IDVIDDAALR PGRFGKKHYV PLPGADERVS ILRALARNKP ISSSVDLGAL ARREECKNLT
701: GADLASMVNE AAMAALEERL EFLENGESSM SSSSAIELPH FERALAKMQP SVSEQQRRHY EALCKKYSAS
Best Arabidopsis Sequence Match ( AT3G01610.2 )
(BLAST)
001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE DEIEKARTKS
Arabidopsis Description
CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.