Factsheet for Os05t0376200-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0498800-01	Rice	cytosol	98.21	66.44
TraesCS2A01G355200.1	Wheat	cytosol	82.86	57.14
TraesCS2B01G373100.1	Wheat	cytosol	83.12	57.12
HORVU2Hr1G086170.2	Barley	cytosol	83.12	57.12
TraesCS2D01G353100.1	Wheat	cytosol	82.86	57.04
Zm00001d025776_P002	Maize	cytosol	79.28	54.58
KXG26645	Sorghum	cytosol	78.77	54.23
GSMUA_Achr6P11080_001	Banana	plastid	74.17	48.41
KRH70928	Soybean	cytosol	66.5	42.9
Solyc05g012190.2.1	Tomato	cytosol	66.24	42.39
AT2G03670.1	Thale cress	cytosol	65.22	42.29
PGSC0003DMT400072919	Potato	cytosol	65.47	41.9
Bra017378.1-P	Field mustard	cytosol	64.19	41.63
CDY04161	Canola	cytosol	64.19	41.63
CDY33111	Canola	endoplasmic reticulum, plasma membrane, vacuole	63.94	34.92
Os02t0784700-00	Rice	cytosol	16.11	33.51
Os04t0284600-01	Rice	cytosol	25.06	27.45
Os02t0205300-01	Rice	cytosol	27.88	25.71
Os06t0600100-01	Rice	plasma membrane	27.62	25.53
Os06t0607800-01	Rice	nucleus	26.09	25.44
Os06t0192600-01	Rice	cytosol, nucleus, plasma membrane, plastid	27.62	25.35
Os02t0199900-01	Rice	nucleus, plasma membrane	25.83	25.25
Os02t0325100-01	Rice	plastid	26.85	25.06
Os02t0803700-01	Rice	cytosol, nucleus, plastid	27.37	24.94
Os06t0173100-01	Rice	cytosol, nucleus, plasma membrane	27.11	24.71
Os07t0691800-01	Rice	cytosol, nucleus, plasma membrane, plastid	26.6	23.21
Os03t0298400-01	Rice	plasma membrane	26.6	23.11
Os09t0560200-01	Rice	cytosol, mitochondrion	25.83	22.54
Os10t0442600-01	Rice	cytosol, nucleus, plasma membrane, plastid	11.0	22.05
CDY02982	Canola	cytosol	64.45	21.37
Os06t0109400-01	Rice	cytosol	39.39	20.0
Os03t0151800-02	Rice	cytosol, extracellular, nucleus, plasma membrane, plastid	40.66	19.65
Os08t0413000-00	Rice	mitochondrion	41.43	17.92
Os08t0556550-01	Rice	cytosol	4.35	15.89
Os04t0617600-01	Rice	cytosol	33.25	13.83
Os06t0600301-00	Rice	plasma membrane	0.77	1.33
Os11t0220400-01	Rice	mitochondrion	0.0	0.0
Os08t0556400-01	Rice	endoplasmic reticulum, golgi, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	ProteinID:AAT93884.1	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	ProteinID:BAF17294.1	ProteinID:BAS93729.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	EnsemblPlantsGene:Os05g0376200	EnsemblPlants:Os05t0376200-00	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674
PANTHER:PTHR23077	PANTHER:PTHR23077:SF117	UniProt:Q6AUP8	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000040362D
SEG:seg	:	:	:	:	:

Description

ATPase, AAA+ type, core domain containing protein. (Os05t0376200-00)

Coordinates

chr5:+:18158247..18161024

Molecular Weight (calculated)

42303.7 Da

IEP (calculated)

7.238

GRAVY (calculated)

-0.151

Length

391 amino acids

Sequence
(BLAST)

001: MDGKSSKLLP HLVVASATRV DAIESALRRP GRFDSEIEVT VPTAEERFEI LKLYTKNLHL GECVDLQSVA ASCNGYLGAD LQALCREAAR RAYGRLSSSS
101: ESENVLTLIM EDWESAKSVA KNSVTRGVIK EIPAVSWDDI GGLKAVKKKL QQAVEWPIKH AASFDRLGIS PIRGVLLHGP PGCSKTTLAK AAAHAAQASF
201: FSLSGAELYS KYVGEGEALL RRTFQMARLA SPSIIFFDEA DAIAPKRTGP SGNSSGNATV GERLLSTLLT EMDGLELATG IIVLAATNRP NAIDAALLRP
301: GRFDMVLYVP PPDAEGRYEI LRIHTRKMPL GDDVDLWKVA ERTELFTGAD LEGLEGKSEA ALRSLRPSLT QSVVDEYSNA AIHGPLTRRK H

Best Arabidopsis Sequence Match ( AT2G03670.1 )
(BLAST)

001: MLETESSVCD NIAGNEKWRA EAEIGGNERA LQALRELIIF PFRYPLEART LGLKWPRGLL LYGPPGTGKT SLVRAVVQEC DAHLIVLSPH SVHRAHAGES
101: EKVLREAFAE ASSHAVSDKP SVIFIDEIDV LCPRRDARRE QDVRIASQLF TLMDSNKPSS SAPRVVVVAS TNRVDAIDPA LRRAGRFDAL VEVSTPNEED
201: RLKILQLYTK KVNLDPSVDL QAIAISCNGY VGADLEALCR EATISASKRS SDSLILTSQD FKIAKSVVGP SINRGITVEI PKVTWDDVGG LKDLKKKLQQ
301: AVEWPIKHSA AFVKMGISPM RGILLHGPPG CSKTTLAKAA ANAAQASFFS LSCAELFSMY VGEGEALLRN TFQRARLASP SIIFFDEADV VACKRGDESS
401: SNSSTVGERL LSTLLTEMDG LEEAKGILVL AATNRPYAID AALMRPGRFD LVLYVPPPDL EARFEILQVH TRNMTLGDDV DLRKIAEETD LFTGAELEGL
501: CRESGTVSLR ENIAATAVFN RHFQTAKSSL KPALTIEEVE TYSSFRKAAK RSDSKPIPIN KKKATSTVFG FSWQLGVLSL LLLATGNYYF NHTKHELLVA
601: SAT

Arabidopsis Description

CDC48BCell division control protein 48 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.