Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 2
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006530.1-P | Field mustard | cytosol, nucleus, plastid | 53.54 | 54.75 |
| CDX88865 | Canola | cytosol, extracellular | 54.42 | 19.55 |
| CDY42324 | Canola | cytosol, extracellular | 57.08 | 17.99 |
| Bra020079.1-P | Field mustard | cytosol | 57.08 | 17.89 |
| CDY44958 | Canola | cytosol, plasma membrane | 57.08 | 17.89 |
| Os10t0442600-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 4.42 | 5.13 |
| CDX70903 | Canola | cytosol | 3.1 | 1.68 |
| VIT_09s0002g05800.t01 | Wine grape | cytosol | 3.1 | 1.68 |
| Solyc05g018590.2.1 | Tomato | nucleus | 3.1 | 1.68 |
| Solyc05g018570.2.1 | Tomato | cytosol, extracellular, nucleus, plastid | 3.1 | 1.68 |
| KRH46990 | Soybean | nucleus | 3.1 | 1.67 |
| KRH44668 | Soybean | cytosol, mitochondrion, nucleus | 3.1 | 1.67 |
| AT5G20000.1 | Thale cress | cytosol | 3.1 | 1.67 |
| CDY35832 | Canola | cytosol | 3.1 | 1.67 |
| Bra006529.1-P | Field mustard | cytosol | 3.1 | 1.67 |
| AT5G19990.1 | Thale cress | cytosol | 3.1 | 1.67 |
| Bra002279.1-P | Field mustard | cytosol | 3.1 | 1.67 |
| GSMUA_Achr10P... | Banana | cytosol | 3.1 | 1.67 |
| VIT_04s0008g04690.t01 | Wine grape | cytosol | 3.1 | 1.67 |
| Os06t0600100-01 | Rice | plasma membrane | 3.1 | 1.65 |
| Os02t0205300-01 | Rice | cytosol | 3.1 | 1.65 |
| PGSC0003DMT400038718 | Potato | cytosol | 3.1 | 1.62 |
| Os07t0691800-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 2.65 | 1.34 |
| Os03t0298400-01 | Rice | plasma membrane | 2.65 | 1.33 |
| Os03t0151800-02 | Rice | cytosol, extracellular, nucleus, plasma membrane, plastid | 4.42 | 1.24 |
| Os02t0784700-00 | Rice | cytosol | 0.88 | 1.06 |
| Os08t0556550-01 | Rice | cytosol | 0.44 | 0.93 |
| Os02t0803700-01 | Rice | cytosol, nucleus, plastid | 1.77 | 0.93 |
| Os06t0173100-01 | Rice | cytosol, nucleus, plasma membrane | 1.77 | 0.93 |
| Os08t0413000-00 | Rice | mitochondrion | 3.1 | 0.77 |
| Os05t0376200-00 | Rice | cytosol | 1.33 | 0.77 |
| Os04t0284600-01 | Rice | cytosol | 0.88 | 0.56 |
| Os04t0498800-01 | Rice | cytosol | 1.33 | 0.52 |
| Os02t0199900-01 | Rice | nucleus, plasma membrane | 0.88 | 0.5 |
| Os06t0607800-01 | Rice | nucleus | 0.88 | 0.5 |
| Os06t0192600-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 0.88 | 0.47 |
| Os09t0560200-01 | Rice | cytosol, mitochondrion | 0.88 | 0.45 |
| Os06t0109400-01 | Rice | cytosol | 0.88 | 0.26 |
| Os02t0325100-01 | Rice | plastid | 0.44 | 0.24 |
| Os04t0617600-01 | Rice | cytosol | 0.44 | 0.11 |
| Os08t0556400-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 0.0 | 0.0 |
| Os11t0220400-01 | Rice | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| MapMan:23.5.1.4 | Gene3D:3.40.50.300 | ProteinID:BAD32834.1 | ProteinID:BAH93613.1 | ProteinID:BAS98489.1 | EMBL:CM000143 |
| GO:GO:0000054 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006606 | GO:GO:0006810 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016787 |
| InterPro:IPR002041 | EnsemblPlantsGene:Os06g0600301 | EnsemblPlants:Os06t0600301-00 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00627 |
| PFscan:PS51418 | PANTHER:PTHR24071 | PANTHER:PTHR24071:SF5 | UniProt:Q69XM7 | InterPro:Ran_GTPase | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | UniParc:UPI00003FF259 | : | : | : | : |
Description
RAN3Similar to GTP-binding nuclear protein Ran1B (Fragment). (Os06t0600301-00)
Coordinates
chr6:+:23689553..23691740
Molecular Weight (calculated)
25614.0 Da
IEP (calculated)
8.119
GRAVY (calculated)
-0.294
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRAQALPDP AAVGYPSFKL ILVGDGGTGK TTFVKRHITG EFEKRYEPTI GVEVRPLDFH TSRGKVRFCC WDTAGQEKFG GLRDGYYIHG HCAIIMFDVT
101: SRLTYKNVPT WHKDICRVCD NIPIVLCGNK VDMKNRQVKA KMVTFHRKKN LQYYEISAKS NYNFEKPFLY LARKLTGDMN LRFVEELALL PADVTIDLIA
201: QQKIETEIAA AAAMPLPDED EDGLMD
101: SRLTYKNVPT WHKDICRVCD NIPIVLCGNK VDMKNRQVKA KMVTFHRKKN LQYYEISAKS NYNFEKPFLY LARKLTGDMN LRFVEELALL PADVTIDLIA
201: QQKIETEIAA AAAMPLPDED EDGLMD
001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E
Arabidopsis Description
RAN3GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UD71]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.