Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G457600.3 | Wheat | mitochondrion | 81.91 | 82.53 |
| TraesCS2D01G458300.3 | Wheat | mitochondrion | 81.6 | 82.21 |
| TraesCS2B01G480000.3 | Wheat | mitochondrion | 81.28 | 81.89 |
| EES12865 | Sorghum | mitochondrion | 80.0 | 81.03 |
| HORVU2Hr1G104530.9 | Barley | cytosol | 77.02 | 79.3 |
| Zm00001d002462_P010 | Maize | mitochondrion | 76.49 | 67.64 |
| GSMUA_Achr6P20030_001 | Banana | cytosol | 56.06 | 54.55 |
| Solyc06g008730.2.1 | Tomato | cytosol | 52.45 | 53.07 |
| KRG96401 | Soybean | mitochondrion | 51.7 | 52.88 |
| PGSC0003DMT400013679 | Potato | cytosol | 52.02 | 52.58 |
| VIT_07s0104g01610.t01 | Wine grape | cytosol | 51.91 | 52.03 |
| KRH68139 | Soybean | cytosol | 36.6 | 51.34 |
| CDY32490 | Canola | mitochondrion | 50.43 | 51.13 |
| CDY37450 | Canola | mitochondrion | 50.21 | 51.03 |
| AT1G03000.1 | Thale cress | mitochondrion | 50.74 | 50.69 |
| CDX89923 | Canola | cytosol | 40.74 | 50.13 |
| Os05t0376200-00 | Rice | cytosol | 13.83 | 33.25 |
| Os02t0784700-00 | Rice | cytosol | 6.6 | 32.98 |
| Os04t0498800-01 | Rice | cytosol | 17.13 | 27.85 |
| Os02t0199900-01 | Rice | nucleus, plasma membrane | 11.6 | 27.25 |
| Os06t0192600-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 12.13 | 26.76 |
| Os03t0298400-01 | Rice | plasma membrane | 12.77 | 26.67 |
| Os06t0607800-01 | Rice | nucleus | 11.28 | 26.43 |
| Os03t0151800-02 | Rice | cytosol, extracellular, nucleus, plasma membrane, plastid | 22.66 | 26.33 |
| Os06t0600100-01 | Rice | plasma membrane | 11.81 | 26.24 |
| Os02t0205300-01 | Rice | cytosol | 11.81 | 26.18 |
| Os07t0691800-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 12.45 | 26.12 |
| Os02t0325100-01 | Rice | plastid | 11.49 | 25.78 |
| Bra032565.1-P | Field mustard | mitochondrion | 50.32 | 25.38 |
| Os06t0173100-01 | Rice | cytosol, nucleus, plasma membrane | 11.49 | 25.17 |
| Os02t0803700-01 | Rice | cytosol, nucleus, plastid | 11.49 | 25.17 |
| Os10t0442600-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 5.21 | 25.13 |
| Os04t0284600-01 | Rice | cytosol | 9.36 | 24.65 |
| Os06t0109400-01 | Rice | cytosol | 20.11 | 24.55 |
| Os09t0560200-01 | Rice | cytosol, mitochondrion | 11.06 | 23.21 |
| Os08t0413000-00 | Rice | mitochondrion | 21.38 | 22.23 |
| Os08t0556550-01 | Rice | cytosol | 2.23 | 19.63 |
| Os11t0220400-01 | Rice | mitochondrion | 5.64 | 11.32 |
| Os08t0556400-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 0.96 | 1.29 |
| Os06t0600301-00 | Rice | plasma membrane | 0.11 | 0.44 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:23.4.1.5.1.2 | Gene3D:3.40.50.300 | EntrezGene:4337006 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | ProteinID:BAF15800.1 | ProteinID:BAS91027.1 | ProteinID:CAD41890.2 | ProteinID:EAZ31997.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006629 | GO:GO:0006635 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016558 |
| EnsemblPlantsGene:Os04g0617600 | EnsemblPlants:Os04t0617600-01 | InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | PANTHER:PTHR23077 |
| PANTHER:PTHR23077:SF9 | UniProt:Q7XTN8 | SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI00001B0E6C | RefSeq:XP_015634963.1 |
| RefSeq:XP_015634964.1 | SEG:seg | : | : | : | : |
Description
Similar to Cdc48 cell division control protein 48, AAA family. (Os04t0617600-01)
Coordinates
chr4:-:31364111..31369399
Molecular Weight (calculated)
101946.0 Da
IEP (calculated)
6.539
GRAVY (calculated)
-0.159
Length
940 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEATRQRRK PLVLASTQAL LDSLPGDRRG SALPPPPPPE PVRIRAGVLR FPNSSSSSSS AGGGEFGEAA SFVALPSSAL RRLAVVTGTP VLVKNADNNV
101: GRIAKAVVLD HPCLDDSLTE HTEPVDAASP LDNAMGILPC RSFPTNGFPP LDEEVAYVSP LLAFNLGVHV SCLKLLVQKG EKPFKFCSKV EDSDLAAGEE
201: SNPILHLEIL PSPQVPKHAL HLRVSVVRIP ECGVFASLKA NSAIGGSDYQ DMIDQALNEH FKFDRFLARG DVFCIRNNWN CGATSCLACN REDNRLHPHD
301: MIYFKVTGME PSDEPVHRVN CNQTALVLGG GASASIPPYS LFASPGASVP LHSEIVEHLA SIIAPALCPS NILPKVKFST FLYGPSGCGK RTVVKHVANH
401: FGLHVVECSC HDLMTSSDSG APAALVAAFK EAHKYSPCII LLRHFDAIGN TSSNEGTQSA QSGTAANIES VIKQYIGQHW VATESLPARD INGNPYLVEP
501: ECVSPLQVIL VATADRAEGM PQSIRRCFRH EINMKSINEE QRRNLISETL HCVSTSADES INDKFVKDLA VQTSGFMPRD ILALVADAGI SFAHKVETDK
601: NNSEGDKLKG ILPTSSSSSQ NEEKTFCKEY ILSSLERAKK RNRAALGTPK VPNVKWEDVG GLEEVKKVIL DTIQLPLLYK HLFSSKLGKR SGVLLYGPPG
701: TGKTLLAKAV ATECSLNFLS VKGPELINMY VGESEKNVRD IFEKARSARP CVIFFDELDS LAPARGSSSD SAGVMDRVVS QLLVEIDGLS DNSQDLFIIG
801: ATNRPDLLDS ALLRPGRFDK LLYVGVNSDA SYRERILKAQ TRKYKLHENV SLLSIAQQCP PNFTGADIYA LCADAWYHAA KNLAKTLEAD PSRTSEASAD
901: DVIVEINDFM TVLGDITPSL SIEELQNYEQ LRKKIEGPSR
101: GRIAKAVVLD HPCLDDSLTE HTEPVDAASP LDNAMGILPC RSFPTNGFPP LDEEVAYVSP LLAFNLGVHV SCLKLLVQKG EKPFKFCSKV EDSDLAAGEE
201: SNPILHLEIL PSPQVPKHAL HLRVSVVRIP ECGVFASLKA NSAIGGSDYQ DMIDQALNEH FKFDRFLARG DVFCIRNNWN CGATSCLACN REDNRLHPHD
301: MIYFKVTGME PSDEPVHRVN CNQTALVLGG GASASIPPYS LFASPGASVP LHSEIVEHLA SIIAPALCPS NILPKVKFST FLYGPSGCGK RTVVKHVANH
401: FGLHVVECSC HDLMTSSDSG APAALVAAFK EAHKYSPCII LLRHFDAIGN TSSNEGTQSA QSGTAANIES VIKQYIGQHW VATESLPARD INGNPYLVEP
501: ECVSPLQVIL VATADRAEGM PQSIRRCFRH EINMKSINEE QRRNLISETL HCVSTSADES INDKFVKDLA VQTSGFMPRD ILALVADAGI SFAHKVETDK
601: NNSEGDKLKG ILPTSSSSSQ NEEKTFCKEY ILSSLERAKK RNRAALGTPK VPNVKWEDVG GLEEVKKVIL DTIQLPLLYK HLFSSKLGKR SGVLLYGPPG
701: TGKTLLAKAV ATECSLNFLS VKGPELINMY VGESEKNVRD IFEKARSARP CVIFFDELDS LAPARGSSSD SAGVMDRVVS QLLVEIDGLS DNSQDLFIIG
801: ATNRPDLLDS ALLRPGRFDK LLYVGVNSDA SYRERILKAQ TRKYKLHENV SLLSIAQQCP PNFTGADIYA LCADAWYHAA KNLAKTLEAD PSRTSEASAD
901: DVIVEINDFM TVLGDITPSL SIEELQNYEQ LRKKIEGPSR
001: MVERRNPLVL SSTRSTLRSV LNSSQPSSAD GDRVLNKDGD LLRGNARLSA GILRWRKDGE NVSDAKLDSL DDSALVGLST QLLKRLSINS GSLVVVKNIE
101: IGIQRVAQVV VLDPPKTTLE DASLTQVPVS DSLHTMLVFP TYDLMGQQLL DQEVAYLSPM LAFNLSLHIS CLKSLVHRGN GVLEKYFEAK CDEEFIGKSA
201: EDGSKIGLDL EPVSQVPGYA SHLRVSFVKI PECGTIPSLK VNSSFEAEER QGLIDSALQK YFGTDRQLSR GDIFRIYIDW NCGSSICNPC SQRLCSESDD
301: YIYFKVIAME PSNERFLRVN HSQTALVLGG TVSSGLPPDL LVYRSKVPMP LQEETVNILA SVLSPPLCPS ALASKLRVAV LLHGIPGCGK RTVVKYVARR
401: LGLHVVEFSC HSLLASSERK TSTALAQTFN MARRYSPTIL LLRHFDVFKN LGSQDGSLGD RVGVSFEIAS VIRELTEPVS NGDSSMEEKS NSNFSENEVG
501: KFRGHQVLLI ASAESTEGIS PTIRRCFSHE IRMGSLNDEQ RSEMLSQSLQ GVSQFLNISS DEFMKGLVGQ TSGFLPRDLQ ALVADAGANL YISQESETKK
601: INSLSDDLHG VDIHQASQID NSTEKLTAKE DFTKALDRSK KRNASALGAP KVPNVKWDDV GGLEDVKTSI LDTVQLPLLH KDLFSSGLRK RSGVLLYGPP
701: GTGKTLLAKA VATECSLNFL SVKGPELINM YIGESEKNVR DIFEKARSAR PCVIFFDELD SLAPARGASG DSGGVMDRVV SQMLAEIDGL SDSSQDLFII
801: GASNRPDLID PALLRPGRFD KLLYVGVNAD ASYRERVLKA LTRKFKLSED VSLYSVAKKC PSTFTGADMY ALCADAWFQA AKRKVSKSDS GDMPTEEDDP
901: DSVVVEYVDF IKAMDQLSPS LSITELKKYE MLRDQFQGRS S
101: IGIQRVAQVV VLDPPKTTLE DASLTQVPVS DSLHTMLVFP TYDLMGQQLL DQEVAYLSPM LAFNLSLHIS CLKSLVHRGN GVLEKYFEAK CDEEFIGKSA
201: EDGSKIGLDL EPVSQVPGYA SHLRVSFVKI PECGTIPSLK VNSSFEAEER QGLIDSALQK YFGTDRQLSR GDIFRIYIDW NCGSSICNPC SQRLCSESDD
301: YIYFKVIAME PSNERFLRVN HSQTALVLGG TVSSGLPPDL LVYRSKVPMP LQEETVNILA SVLSPPLCPS ALASKLRVAV LLHGIPGCGK RTVVKYVARR
401: LGLHVVEFSC HSLLASSERK TSTALAQTFN MARRYSPTIL LLRHFDVFKN LGSQDGSLGD RVGVSFEIAS VIRELTEPVS NGDSSMEEKS NSNFSENEVG
501: KFRGHQVLLI ASAESTEGIS PTIRRCFSHE IRMGSLNDEQ RSEMLSQSLQ GVSQFLNISS DEFMKGLVGQ TSGFLPRDLQ ALVADAGANL YISQESETKK
601: INSLSDDLHG VDIHQASQID NSTEKLTAKE DFTKALDRSK KRNASALGAP KVPNVKWDDV GGLEDVKTSI LDTVQLPLLH KDLFSSGLRK RSGVLLYGPP
701: GTGKTLLAKA VATECSLNFL SVKGPELINM YIGESEKNVR DIFEKARSAR PCVIFFDELD SLAPARGASG DSGGVMDRVV SQMLAEIDGL SDSSQDLFII
801: GASNRPDLID PALLRPGRFD KLLYVGVNAD ASYRERVLKA LTRKFKLSED VSLYSVAKKC PSTFTGADMY ALCADAWFQA AKRKVSKSDS GDMPTEEDDP
901: DSVVVEYVDF IKAMDQLSPS LSITELKKYE MLRDQFQGRS S
Arabidopsis Description
PEX6Peroxisome biogenesis protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY16]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.