Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0325100-01 | Rice | plastid | 46.88 | 50.12 |
| TraesCS2B01G493900.1 | Wheat | cytosol | 49.33 | 48.79 |
| TraesCS2A01G471400.1 | Wheat | cytosol | 49.11 | 48.25 |
| TraesCS2B01G494200.1 | Wheat | cytosol | 48.88 | 48.03 |
| TraesCS2D01G471200.1 | Wheat | cytosol | 48.44 | 47.9 |
| Os02t0784700-00 | Rice | cytosol | 17.86 | 42.55 |
| Os07t0691800-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 35.94 | 35.94 |
| Os03t0298400-01 | Rice | plasma membrane | 35.94 | 35.78 |
| Os06t0600100-01 | Rice | plasma membrane | 32.59 | 34.52 |
| Os06t0173100-01 | Rice | cytosol, nucleus, plasma membrane | 32.37 | 33.8 |
| Os02t0205300-01 | Rice | cytosol | 31.92 | 33.73 |
| Os06t0192600-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 31.7 | 33.33 |
| Os02t0803700-01 | Rice | cytosol, nucleus, plastid | 31.92 | 33.33 |
| Os02t0199900-01 | Rice | nucleus, plasma membrane | 29.69 | 33.25 |
| Os06t0607800-01 | Rice | nucleus | 29.46 | 32.92 |
| Os04t0284600-01 | Rice | cytosol | 26.12 | 32.77 |
| Os05t0376200-00 | Rice | cytosol | 22.54 | 25.83 |
| Os04t0498800-01 | Rice | cytosol | 26.56 | 20.59 |
| Os10t0442600-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 8.71 | 20.0 |
| Os03t0151800-02 | Rice | cytosol, extracellular, nucleus, plasma membrane, plastid | 27.01 | 14.96 |
| Os06t0109400-01 | Rice | cytosol | 23.88 | 13.9 |
| Os08t0413000-00 | Rice | mitochondrion | 27.23 | 13.5 |
| Os08t0556550-01 | Rice | cytosol | 2.68 | 11.21 |
| Os04t0617600-01 | Rice | cytosol | 23.21 | 11.06 |
| Os11t0220400-01 | Rice | mitochondrion | 1.79 | 1.71 |
| Os06t0600301-00 | Rice | plasma membrane | 0.45 | 0.88 |
| Os08t0556400-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:2.40.50.140 | Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:4347848 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | ProteinID:BAD45959.1 | ProteinID:BAD46074.1 | ProteinID:BAF25838.1 | ProteinID:BAT09395.1 |
| ncoils:Coil | ProteinID:EAZ45660.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006508 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008540 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016787 | GO:GO:0017025 | GO:GO:0019538 | GO:GO:0030433 | GO:GO:0031595 |
| GO:GO:0031597 | GO:GO:0036402 | GO:GO:0045899 | GO:GO:1901800 | EnsemblPlantsGene:Os09g0560200 | EnsemblPlants:Os09t0560200-01 |
| InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | PANTHER:PTHR23073 | PANTHER:PTHR23073:SF38 | UniProt:Q653E3 |
| SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI000043A468 | RefSeq:XP_015612481.1 | SEG:seg | : |
Description
Similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7). Splice isoform 2. (Os09t0560200-01)
Coordinates
chr9:+:22260384..22262115
Molecular Weight (calculated)
48701.9 Da
IEP (calculated)
4.666
GRAVY (calculated)
-0.263
Length
448 amino acids
Sequence
(BLAST)
(BLAST)
001: MALRPPRPCP AGVQQRQHDV DGAGNAKTSP EQKLELLDLQ EEDDELIFLD ADDEEGRQLR EKLESLEREF CLLDEQRDNA LFQIHVLEET VRFREELVRR
101: LTAVTPLVVA QLDEVVDEHH AVVTLGDGCE RKMCVGVAGS LDRGLLKPSA NVALNGRSLA LVGVPPSDVA ACSAARFLVA DADKPGVAYD DIGGCEAQKR
201: EVREAVELPL THPELFAAAG VDPPRGVLLH GPLGTGKTML AKAVARETSA AFFRVNAAEL ARHDGPRVVR DLFRLARDMA PAIVFIDEVD AIAAARQGGD
301: DDDGGARRHV QRVLIELLTQ MDGFDESTNV RVIMATNRAD DLDPALLRPG RLDRKVEFTA PESPEEKRLV LQTCTAGMSL DGDVDLDALA ARRDKLSAAE
401: IAAVCRKAGM QAVRDRRGAV TADDFDKGYL AVVGKKPGDA ATEFHFYN
101: LTAVTPLVVA QLDEVVDEHH AVVTLGDGCE RKMCVGVAGS LDRGLLKPSA NVALNGRSLA LVGVPPSDVA ACSAARFLVA DADKPGVAYD DIGGCEAQKR
201: EVREAVELPL THPELFAAAG VDPPRGVLLH GPLGTGKTML AKAVARETSA AFFRVNAAEL ARHDGPRVVR DLFRLARDMA PAIVFIDEVD AIAAARQGGD
301: DDDGGARRHV QRVLIELLTQ MDGFDESTNV RVIMATNRAD DLDPALLRPG RLDRKVEFTA PESPEEKRLV LQTCTAGMSL DGDVDLDALA ARRDKLSAAE
401: IAAVCRKAGM QAVRDRRGAV TADDFDKGYL AVVGKKPGDA ATEFHFYN
001: MASAAVASMV LDPKASPALM DLSTADEEDL YGRLKSLERQ LEFTDIQEEY VKDEQKNLKR ELLRAQEEVK RIQSVPLVIG QFMEMVDQNN GIVGSTTGSN
101: YYVRILSTIN RELLKPSASV ALHRHSNALV DVLPPEADSS ISLLSQSEKP DVSYNDIGGC DIQKQEIREA VELPLTHHEL YKQIGIDPPR GVLLYGPPGT
201: GKTMLAKAVA NHTTAAFIRV VGSEFVQKYL GEGPRMVRDV FRLAKENAPA IIFIDEVDAI ATARFDAQTG ADREVQRILM ELLNQMDGFD QTVNVKVIMA
301: TNRADTLDPA LLRPGRLDRK IEFPLPDRRQ KRLVFQVCTS KMNLSDEVDL EDYVSRPDKI SAAEIAAICQ EAGMHAVRKN RYVILPKDFE KGYRANVKKP
401: DTDFEFYK
101: YYVRILSTIN RELLKPSASV ALHRHSNALV DVLPPEADSS ISLLSQSEKP DVSYNDIGGC DIQKQEIREA VELPLTHHEL YKQIGIDPPR GVLLYGPPGT
201: GKTMLAKAVA NHTTAAFIRV VGSEFVQKYL GEGPRMVRDV FRLAKENAPA IIFIDEVDAI ATARFDAQTG ADREVQRILM ELLNQMDGFD QTVNVKVIMA
301: TNRADTLDPA LLRPGRLDRK IEFPLPDRRQ KRLVFQVCTS KMNLSDEVDL EDYVSRPDKI SAAEIAAICQ EAGMHAVRKN RYVILPKDFE KGYRANVKKP
401: DTDFEFYK
Arabidopsis Description
RPT3RPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UAH2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.