Factsheet for TraesCS2B01G494200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G471400.1	Wheat	cytosol	93.2	93.2
TraesCS2D01G471200.1	Wheat	cytosol	92.54	93.16
TraesCS2B01G493900.1	Wheat	cytosol	92.32	92.94
TraesCS2B01G100400.1	Wheat	cytosol, plastid	47.37	52.05
TraesCS2B01G499600.1	Wheat	cytosol	47.37	51.8
Os09t0560200-01	Rice	cytosol, mitochondrion	48.03	48.88
TraesCS7B01G254400.1	Wheat	cytosol	35.96	38.77
TraesCS4B01G189200.1	Wheat	cytosol	38.16	38.67
TraesCS6B01G207100.1	Wheat	cytosol	35.31	38.52
TraesCS2B01G105700.1	Wheat	cytosol	37.5	38.08
TraesCS7B01G468900.1	Wheat	cytosol	32.68	37.44
TraesCS6B01G376500.1	Wheat	golgi	34.87	37.32
TraesCS7B01G060900.1	Wheat	golgi	34.65	37.09
TraesCS6B01G188500.1	Wheat	cytosol	32.24	36.75
TraesCS7B01G280400.1	Wheat	cytosol, unclear	32.24	36.75
TraesCS7B01G036400.1	Wheat	cytosol	33.55	35.83
TraesCS3B01G457100.1	Wheat	cytosol, golgi	32.68	34.33
TraesCS2B01G373100.1	Wheat	cytosol	27.85	22.32
TraesCS1B01G235400.1	Wheat	cytosol	27.19	19.31
TraesCS3B01G171400.1	Wheat	cytosol	27.63	17.33
TraesCS3B01G487900.1	Wheat	mitochondrion	27.41	16.78
TraesCS3B01G171200.1	Wheat	cytosol	28.73	16.62
TraesCS3B01G172100.1	Wheat	cytosol	28.73	16.58
TraesCS3B01G154400.1	Wheat	cytosol	28.51	16.5
TraesCS4B01G268400.1	Wheat	golgi	29.39	16.48
TraesCS1B01G235300.1	Wheat	cytosol	28.73	16.38
TraesCS1B01G419200.1	Wheat	cytosol	28.29	16.35
TraesCS1B01G259200.1	Wheat	cytosol	28.29	16.35
TraesCS1B01G192400.1	Wheat	cytosol	28.95	16.34
TraesCS4B01G268200.1	Wheat	cytosol	29.17	16.28
TraesCS1B01G235500.1	Wheat	cytosol	28.51	16.25
TraesCS3B01G172000.1	Wheat	cytosol	27.63	16.07
TraesCS3B01G171300.1	Wheat	cytosol	21.93	13.72
TraesCS2B01G480000.3	Wheat	mitochondrion	26.32	12.86
TraesCS1B01G089700.1	Wheat	cytosol, plastid	26.75	12.44
TraesCS4B01G108300.1	Wheat	plastid	26.54	12.1
TraesCS5B01G323100.1	Wheat	cytosol	14.69	11.53
TraesCS5B01G299200.1	Wheat	mitochondrion	22.15	9.23
TraesCS7B01G174800.1	Wheat	cytosol	19.96	8.83

Protein Annotations

Gene3D:1.10.8.60	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163
InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23073	PANTHER:PTHR23073:SF38	SMART:SM00382
SUPFAM:SSF52540	TIGRFAMs:TIGR01242	EnsemblPlantsGene:TraesCS2B01G494200	EnsemblPlants:TraesCS2B01G494200.1	TIGR:cd00009	SEG:seg

Description

No Description!

Coordinates

chr2B:-:691427986..691429356

Molecular Weight (calculated)

49675.2 Da

IEP (calculated)

4.572

GRAVY (calculated)

-0.120

Length

456 amino acids

Sequence
(BLAST)

001: MAASAKPLHS TPSDLAVQQY HFLCPGDVGH DDSAELYLPP RPPIPRELME DLGTGLDTGD VGENADLFRQ FMALEKELGL LECEEEDLRI EIADLLPVVR
101: IMEAEHEYQQ ETKCAGALIV GHVVEVVDEG HAVVATSARP FAFCVPVLAD VDRALLKPSA NVALSMSNLA VVQVLPPDSG WTVPLVKATE RPSVTYADVI
201: GCDEQKREVL EAVELPLTHP ELFARAGVEA PPGVLLHGPP GTGKTMLAKA VAHHTSAAFI RVSGSEFVNR HPGEGPRMVR EVFQAARDNA PAIIFFDEVD
301: AIAAARTDSD DASGADREVY RVLLELLGQM DGFDQCPNVR VIMATNRADA LDPALLRPGR LDRRVEFPLP GRAQKRRLFQ ACTAGMPLDG GVDLEDLVAR
401: HEEMSAADID AVCREAGMRA VRDRRCVVTR EDFEEGYHAV AKHIDRGADQ FAFYSL

Best Arabidopsis Sequence Match ( AT2G20140.1 )
(BLAST)

001: MGQGPSGGLN RQGDRKPDGG EKKEKKFEPA APPARVGRKQ RKQKGPEAAA RLPTVTPSTK CKLRLLKLER IKDYLLMEEE FVANQERLKP QEEKAEEDRS
101: KVDDLRGTPM SVGNLEELID ENHAIVSSSV GPEYYVGILS FVDKDQLEPG CSILMHNKVL SVVGILQDEV DPMVSVMKVE KAPLESYADI GGLEAQIQEI
201: KEAVELPLTH PELYEDIGIK PPKGVILYGE PGTGKTLLAK AVANSTSATF LRVVGSELIQ KYLGDGPKLV RELFRVADDL SPSIVFIDEI DAVGTKRYDA
301: NSGGEREIQR TMLELLNQLD GFDSRGDVKV ILATNRIESL DPALLRPGRI DRKIEFPLPD IKTRRRIFQI HTSKMTLAED VNLEEFVMTK DEFSGADIKA
401: ICTEAGLLAL RERRMKVTHV DFKKAKEKVM FKKKEGVPEG LYM

Arabidopsis Description

RPT2BRPT2b [Source:UniProtKB/TrEMBL;Acc:A0A178VM16]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.